RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 GNAT2P19087 354 aa17.71■□□□□ 0.43
GTF3C1-205ENST00000564747 CLCN6P51797 869 aa17.71■□□□□ 0.43
GTF3C1-205ENST00000564747 SHISA4Q96DD7 197 aa17.71■□□□□ 0.43
GTF3C1-205ENST00000564747 BAG1Q99933 345 aaPredicted RBP17.71■□□□□ 0.43
GTF3C1-205ENST00000564747 ST7Q9NRC1 585 aa17.71■□□□□ 0.43
GTF3C1-205ENST00000564747 FAM205CA6NFA0 338 aa17.7■□□□□ 0.42
GTF3C1-205ENST00000564747 MINDY4BA8MYZ0 360 aa17.7■□□□□ 0.42
GTF3C1-205ENST00000564747 ZSCAN12O43309 604 aa17.7■□□□□ 0.42
GTF3C1-205ENST00000564747 ACTN4O43707 911 aaKnown RBP17.7■□□□□ 0.42
GTF3C1-205ENST00000564747 ADGRA1Q86SQ6 560 aa17.7■□□□□ 0.42
GTF3C1-205ENST00000564747 TC2NQ8N9U0 490 aa17.7■□□□□ 0.42
GTF3C1-205ENST00000564747 ENOX1Q8TC92 643 aaKnown RBP17.7■□□□□ 0.42
GTF3C1-205ENST00000564747 SDR42E1Q8WUS8 393 aa17.7■□□□□ 0.42
GTF3C1-205ENST00000564747 PNPLA7Q6ZV29 1317 aa17.7■□□□□ 0.42
GTF3C1-205ENST00000564747 CCDC196A0A1B0GTZ2 297 aa17.7■□□□□ 0.42
GTF3C1-205ENST00000564747 SPECC1LQ69YQ0 1117 aa17.7■□□□□ 0.42
GTF3C1-205ENST00000564747 FCHSD1Q86WN1 690 aa17.7■□□□□ 0.42
GTF3C1-205ENST00000564747 TMTC2Q8N394 836 aa17.7■□□□□ 0.42
GTF3C1-205ENST00000564747 ZNF579Q8NAF0 562 aaKnown RBP17.7■□□□□ 0.42
GTF3C1-205ENST00000564747 PARP3Q9Y6F1 533 aa17.7■□□□□ 0.42
GTF3C1-205ENST00000564747 PPARAQ07869 468 aa17.69■□□□□ 0.42
GTF3C1-205ENST00000564747 TOGARAM2Q6ZUX3 1019 aa17.69■□□□□ 0.42
GTF3C1-205ENST00000564747 UBXN4Q92575 508 aa17.69■□□□□ 0.42
GTF3C1-205ENST00000564747 UBAC1Q9BSL1 405 aa17.69■□□□□ 0.42
GTF3C1-205ENST00000564747 ABCA3Q99758 1704 aa17.69■□□□□ 0.42
GTF3C1-205ENST00000564747 hCG_1642624A0A1W2PR95 340 aa17.69■□□□□ 0.42
GTF3C1-205ENST00000564747 TERF2Q15554 542 aa17.69■□□□□ 0.42
GTF3C1-205ENST00000564747 CARD6Q9BX69 1037 aa17.69■□□□□ 0.42
GTF3C1-205ENST00000564747 WDR24Q96S15 920 aa17.68■□□□□ 0.42
GTF3C1-205ENST00000564747 PODXL2Q9NZ53 605 aa17.68■□□□□ 0.42
GTF3C1-205ENST00000564747 DOCK2Q92608 1830 aa17.68■□□□□ 0.42
GTF3C1-205ENST00000564747 A0A087X0B3 334 aa17.68■□□□□ 0.42
GTF3C1-205ENST00000564747 STX10O60499 249 aa17.68■□□□□ 0.42
GTF3C1-205ENST00000564747 CYP7A1P22680 504 aa17.68■□□□□ 0.42
GTF3C1-205ENST00000564747 EARS2Q5JPH6 523 aaKnown RBP17.68■□□□□ 0.42
GTF3C1-205ENST00000564747 MNS1Q8NEH6 495 aa17.68■□□□□ 0.42
GTF3C1-205ENST00000564747 EPSTI1Q96J88 318 aa17.68■□□□□ 0.42
GTF3C1-205ENST00000564747 AK7Q96M32 723 aa17.68■□□□□ 0.42
GTF3C1-205ENST00000564747 RNF41Q9H4P4 317 aaPredicted RBP17.68■□□□□ 0.42
GTF3C1-205ENST00000564747 VPS54Q9P1Q0 977 aa17.68■□□□□ 0.42
GTF3C1-205ENST00000564747 DACH1Q9UI36 760 aa17.68■□□□□ 0.42
GTF3C1-205ENST00000564747 FHOD1Q9Y613 1164 aa17.68■□□□□ 0.42
GTF3C1-205ENST00000564747 LRP5O75197 1615 aa17.68■□□□□ 0.42
GTF3C1-205ENST00000564747 TIAM2Q8IVF5 1701 aa17.68■□□□□ 0.42
GTF3C1-205ENST00000564747 NUTM2AQ8IVF1 878 aaPredicted RBP17.68■□□□□ 0.42
GTF3C1-205ENST00000564747 SPATA20Q8TB22 786 aa17.68■□□□□ 0.42
GTF3C1-205ENST00000564747 DHX58Q96C10 678 aa17.68■□□□□ 0.42
GTF3C1-205ENST00000564747 ABCF2Q9UG63 623 aa17.68■□□□□ 0.42
GTF3C1-205ENST00000564747 CEP131Q9UPN4 1083 aa17.68■□□□□ 0.42
GTF3C1-205ENST00000564747 TNKSO95271 1327 aa17.67■□□□□ 0.42
GTF3C1-205ENST00000564747 PRDM1O75626 825 aa17.67■□□□□ 0.42
GTF3C1-205ENST00000564747 CASP1P29466 404 aa17.67■□□□□ 0.42
GTF3C1-205ENST00000564747 EIF5P55010 431 aaKnown RBP17.67■□□□□ 0.42
GTF3C1-205ENST00000564747 GNG11P61952 73 aa17.67■□□□□ 0.42
GTF3C1-205ENST00000564747 BMS1Q14692 1282 aaKnown RBP17.67■□□□□ 0.42
GTF3C1-205ENST00000564747 SEC23AQ15436 765 aa17.67■□□□□ 0.42
GTF3C1-205ENST00000564747 ARAP2Q8WZ64 1704 aa17.67■□□□□ 0.42
GTF3C1-205ENST00000564747 TADA3O75528 432 aa17.67■□□□□ 0.42
GTF3C1-205ENST00000564747 AFMP43652 599 aa17.67■□□□□ 0.42
GTF3C1-205ENST00000564747 NR1I3Q14994 352 aa17.67■□□□□ 0.42
GTF3C1-205ENST00000564747 KANK3Q6NY19 840 aa17.67■□□□□ 0.42
GTF3C1-205ENST00000564747 TRIML1Q8N9V2 468 aa17.67■□□□□ 0.42
GTF3C1-205ENST00000564747 WTIPA6NIX2 430 aaPredicted RBP17.66■□□□□ 0.42
GTF3C1-205ENST00000564747 IGHMBP2P38935 993 aaKnown RBP17.66■□□□□ 0.42
GTF3C1-205ENST00000564747 CHRNDQ07001 517 aa17.66■□□□□ 0.42
GTF3C1-205ENST00000564747 PKN1Q16512 942 aa17.66■□□□□ 0.42
GTF3C1-205ENST00000564747 DESI2Q9BSY9 194 aa17.66■□□□□ 0.42
GTF3C1-205ENST00000564747 MTA3Q9BTC8 594 aa17.66■□□□□ 0.42
GTF3C1-205ENST00000564747 SRRTQ9BXP5 876 aaKnown RBP17.66■□□□□ 0.42
GTF3C1-205ENST00000564747 EPC1Q9H2F5 836 aa17.66■□□□□ 0.42
GTF3C1-205ENST00000564747 RAI14Q9P0K7 980 aa17.66■□□□□ 0.42
GTF3C1-205ENST00000564747 TEX33O43247 280 aa17.66■□□□□ 0.42
GTF3C1-205ENST00000564747 PLCD1P51178 756 aa17.66■□□□□ 0.42
GTF3C1-205ENST00000564747 RNF26Q9BY78 433 aaPredicted RBP17.66■□□□□ 0.42
GTF3C1-205ENST00000564747 TRIM75PA6NK02 468 aa17.65■□□□□ 0.42
GTF3C1-205ENST00000564747 EXOC5O00471 708 aa17.65■□□□□ 0.42
GTF3C1-205ENST00000564747 WNT7AO00755 349 aa17.65■□□□□ 0.42
GTF3C1-205ENST00000564747 STX17P56962 302 aa17.65■□□□□ 0.42
GTF3C1-205ENST00000564747 AKAP17AQ02040 695 aaKnown RBP17.65■□□□□ 0.42
GTF3C1-205ENST00000564747 CCDC152Q4G0S7 254 aa17.65■□□□□ 0.42
GTF3C1-205ENST00000564747 KLHL10Q6JEL2 608 aa17.65■□□□□ 0.42
GTF3C1-205ENST00000564747 INTS5Q6P9B9 1019 aaKnown RBP17.65■□□□□ 0.42
GTF3C1-205ENST00000564747 ENAHQ8N8S7 591 aaPredicted RBP17.65■□□□□ 0.42
GTF3C1-205ENST00000564747 CYP2D7A0A087X1C5 515 aa17.65■□□□□ 0.42
GTF3C1-205ENST00000564747 A0A0G2JS52 829 aa17.65■□□□□ 0.42
GTF3C1-205ENST00000564747 CASQ1P31415 396 aa17.65■□□□□ 0.42
GTF3C1-205ENST00000564747 RCAN1P53805 252 aa17.65■□□□□ 0.42
GTF3C1-205ENST00000564747 MTF1Q14872 753 aa17.65■□□□□ 0.42
GTF3C1-205ENST00000564747 ESR2Q92731 530 aa17.65■□□□□ 0.42
GTF3C1-205ENST00000564747 V9GY48 417 aaPredicted RBP17.65■□□□□ 0.42
GTF3C1-205ENST00000564747 EFCAB8A8MWE9 144 aa17.64■□□□□ 0.41
GTF3C1-205ENST00000564747 PNMA6AP0CW24 399 aaPredicted RBP17.64■□□□□ 0.41
GTF3C1-205ENST00000564747 CD44P16070 742 aaKnown RBP17.64■□□□□ 0.41
GTF3C1-205ENST00000564747 NOM1Q5C9Z4 860 aaKnown RBP17.64■□□□□ 0.41
GTF3C1-205ENST00000564747 AATFQ9NY61 560 aaKnown RBP eCLIP17.64■□□□□ 0.41
GTF3C1-205ENST00000564747 A0A1B0GTH6 734 aa17.64■□□□□ 0.41
GTF3C1-205ENST00000564747 PLEKHA8P1O95397 391 aa17.64■□□□□ 0.41
GTF3C1-205ENST00000564747 ERCC5P28715 1186 aaPredicted RBP17.64■□□□□ 0.41
GTF3C1-205ENST00000564747 BCORQ6W2J9 1755 aa17.64■□□□□ 0.41
GTF3C1-205ENST00000564747 ZNF335Q9H4Z2 1342 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms