RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 ANKRD7Q92527 254 aa25.67■■□□□ 1.7
SPSB3-206ENST00000564709 BSDC1Q9NW68 430 aaPredicted RBP25.67■■□□□ 1.7
SPSB3-206ENST00000564709 VPS54Q9P1Q0 977 aa25.67■■□□□ 1.7
SPSB3-206ENST00000564709 ANAPC4Q9UJX5 808 aa25.67■■□□□ 1.7
SPSB3-206ENST00000564709 POLR2DO15514 142 aaKnown RBP25.66■■□□□ 1.7
SPSB3-206ENST00000564709 SERPINC1P01008 464 aa25.66■■□□□ 1.7
SPSB3-206ENST00000564709 GTF2E1P29083 439 aaPredicted RBP25.66■■□□□ 1.7
SPSB3-206ENST00000564709 UBE4AQ14139 1066 aa25.66■■□□□ 1.7
SPSB3-206ENST00000564709 HSP90AA4PQ58FG1 418 aa25.66■■□□□ 1.7
SPSB3-206ENST00000564709 GRAMD1CQ8IYS0 662 aa25.66■■□□□ 1.7
SPSB3-206ENST00000564709 PDCL2Q8N4E4 241 aa25.66■■□□□ 1.7
SPSB3-206ENST00000564709 FAM84BQ96KN1 310 aaPredicted RBP25.66■■□□□ 1.7
SPSB3-206ENST00000564709 PTPREP23469 700 aa25.66■■□□□ 1.7
SPSB3-206ENST00000564709 PPP4R3BQ5MIZ7 849 aa25.66■■□□□ 1.7
SPSB3-206ENST00000564709 PDILTQ8N807 584 aa25.66■■□□□ 1.7
SPSB3-206ENST00000564709 ZSCAN10Q96SZ4 725 aaPredicted RBP25.66■■□□□ 1.7
SPSB3-206ENST00000564709 SERTAD1Q9UHV2 236 aa25.66■■□□□ 1.7
SPSB3-206ENST00000564709 SF3B3Q15393 1217 aaKnown RBP25.65■■□□□ 1.7
SPSB3-206ENST00000564709 E4F1Q66K89 784 aaPredicted RBP25.65■■□□□ 1.7
SPSB3-206ENST00000564709 SMARCC1Q92922 1105 aaPredicted RBP25.65■■□□□ 1.7
SPSB3-206ENST00000564709 MTA3Q9BTC8 594 aa25.65■■□□□ 1.7
SPSB3-206ENST00000564709 FANCLQ9NW38 375 aa25.65■■□□□ 1.7
SPSB3-206ENST00000564709 PLEKHA8P1O95397 391 aa25.65■■□□□ 1.7
SPSB3-206ENST00000564709 UBASH3AP57075 661 aa25.65■■□□□ 1.7
SPSB3-206ENST00000564709 MDM2Q00987 491 aaPredicted RBP25.65■■□□□ 1.7
SPSB3-206ENST00000564709 TBC1D9BQ66K14 1250 aa25.65■■□□□ 1.7
SPSB3-206ENST00000564709 CLEC4GQ6UXB4 293 aa25.65■■□□□ 1.7
SPSB3-206ENST00000564709 USP49Q70CQ1 688 aa25.65■■□□□ 1.7
SPSB3-206ENST00000564709 CCDC24Q8N4L8 307 aa25.65■■□□□ 1.7
SPSB3-206ENST00000564709 MYH13Q9UKX3 1938 aa25.65■■□□□ 1.7
SPSB3-206ENST00000564709 ZNF827Q17R98 1081 aa25.64■■□□□ 1.7
SPSB3-206ENST00000564709 CFAP100Q494V2 611 aa25.64■■□□□ 1.7
SPSB3-206ENST00000564709 RCAN1P53805 252 aa25.64■■□□□ 1.69
SPSB3-206ENST00000564709 AKAP17AQ02040 695 aaKnown RBP25.64■■□□□ 1.69
SPSB3-206ENST00000564709 POSTNQ15063 836 aa25.64■■□□□ 1.69
SPSB3-206ENST00000564709 IFIT1BQ5T764 474 aaKnown RBP25.64■■□□□ 1.69
SPSB3-206ENST00000564709 MAN1B1Q9UKM7 699 aa25.64■■□□□ 1.69
SPSB3-206ENST00000564709 TMEM232C9JQI7 657 aa25.63■■□□□ 1.69
SPSB3-206ENST00000564709 PKN1Q16512 942 aa25.63■■□□□ 1.69
SPSB3-206ENST00000564709 EARS2Q5JPH6 523 aaKnown RBP25.63■■□□□ 1.69
SPSB3-206ENST00000564709 RNF26Q9BY78 433 aaPredicted RBP25.63■■□□□ 1.69
SPSB3-206ENST00000564709 GOLGA8FQ08AF8 430 aa25.63■■□□□ 1.69
SPSB3-206ENST00000564709 GOLGA8DPQ0D2H9 430 aa25.63■■□□□ 1.69
SPSB3-206ENST00000564709 CSRNP2Q9H175 543 aa25.63■■□□□ 1.69
SPSB3-206ENST00000564709 TFCP2L1Q9NZI6 479 aa25.63■■□□□ 1.69
SPSB3-206ENST00000564709 CTR9Q6PD62 1173 aa25.62■■□□□ 1.69
SPSB3-206ENST00000564709 PTF1AQ7RTS3 328 aa25.62■■□□□ 1.69
SPSB3-206ENST00000564709 PPP1R13BQ96KQ4 1090 aa25.62■■□□□ 1.69
SPSB3-206ENST00000564709 JAG2Q9Y219 1238 aa25.62■■□□□ 1.69
SPSB3-206ENST00000564709 USP17L12C9JPN9 530 aa25.61■■□□□ 1.69
SPSB3-206ENST00000564709 USP17L21D6R901 530 aa25.61■■□□□ 1.69
SPSB3-206ENST00000564709 FAM98CQ17RN3 349 aaKnown RBP25.61■■□□□ 1.69
SPSB3-206ENST00000564709 CATIPQ7Z7H3 387 aa25.61■■□□□ 1.69
SPSB3-206ENST00000564709 BRIP1Q9BX63 1249 aa25.61■■□□□ 1.69
SPSB3-206ENST00000564709 SRPRBQ9Y5M8 271 aaKnown RBP25.61■■□□□ 1.69
SPSB3-206ENST00000564709 V9GY48 417 aaPredicted RBP25.61■■□□□ 1.69
SPSB3-206ENST00000564709 NMT2O60551 498 aa25.6■■□□□ 1.69
SPSB3-206ENST00000564709 AATFQ9NY61 560 aaKnown RBP eCLIP25.6■■□□□ 1.69
SPSB3-206ENST00000564709 SRP68Q9UHB9 627 aaKnown RBP25.6■■□□□ 1.69
SPSB3-206ENST00000564709 HOOK1Q9UJC3 728 aaKnown RBP25.6■■□□□ 1.69
SPSB3-206ENST00000564709 BAZ2BQ9UIF8 2168 aaKnown RBP25.6■■□□□ 1.69
SPSB3-206ENST00000564709 MECOMQ03112 1051 aa25.6■■□□□ 1.69
SPSB3-206ENST00000564709 FUT2Q10981 343 aa25.6■■□□□ 1.69
SPSB3-206ENST00000564709 BARGINQ6ZT62 677 aa25.6■■□□□ 1.69
SPSB3-206ENST00000564709 TRMT44Q8IYL2 757 aaKnown RBP25.6■■□□□ 1.69
SPSB3-206ENST00000564709 KCND1Q9NSA2 647 aa25.6■■□□□ 1.69
SPSB3-206ENST00000564709 WNT7AO00755 349 aa25.59■■□□□ 1.69
SPSB3-206ENST00000564709 FMR1Q06787 632 aaKnown RBP eCLIP25.59■■□□□ 1.69
SPSB3-206ENST00000564709 SLC4A8Q2Y0W8 1093 aa25.59■■□□□ 1.69
SPSB3-206ENST00000564709 NOM1Q5C9Z4 860 aaKnown RBP25.59■■□□□ 1.69
SPSB3-206ENST00000564709 NSUN4Q96CB9 384 aaKnown RBP25.59■■□□□ 1.69
SPSB3-206ENST00000564709 CEP131Q9UPN4 1083 aa25.59■■□□□ 1.69
SPSB3-206ENST00000564709 DLEC1Q9Y238 1755 aa25.59■■□□□ 1.69
SPSB3-206ENST00000564709 CBFA2T2O43439 604 aa25.59■■□□□ 1.69
SPSB3-206ENST00000564709 KRT2P35908 639 aa25.59■■□□□ 1.69
SPSB3-206ENST00000564709 IQCA1Q86XH1 822 aa25.59■■□□□ 1.69
SPSB3-206ENST00000564709 ACTN4O43707 911 aaKnown RBP25.58■■□□□ 1.69
SPSB3-206ENST00000564709 SMARCE1Q969G3 411 aa25.58■■□□□ 1.69
SPSB3-206ENST00000564709 PHF20Q9BVI0 1012 aa25.58■■□□□ 1.69
SPSB3-206ENST00000564709 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.58■■□□□ 1.69
SPSB3-206ENST00000564709 V9GYY5 206 aaPredicted RBP25.58■■□□□ 1.69
SPSB3-206ENST00000564709 XBP1P17861 261 aa25.58■■□□□ 1.68
SPSB3-206ENST00000564709 FAM47AQ5JRC9 791 aa25.58■■□□□ 1.68
SPSB3-206ENST00000564709 INTS13Q9NVM9 706 aa25.58■■□□□ 1.68
SPSB3-206ENST00000564709 ZNF215Q9UL58 517 aaPredicted RBP25.58■■□□□ 1.68
SPSB3-206ENST00000564709 TRIM75PA6NK02 468 aa25.57■■□□□ 1.68
SPSB3-206ENST00000564709 CYP2D6P10635 497 aa25.57■■□□□ 1.68
SPSB3-206ENST00000564709 PRDX5P30044 214 aa25.57■■□□□ 1.68
SPSB3-206ENST00000564709 TROAPQ12815 778 aa25.57■■□□□ 1.68
SPSB3-206ENST00000564709 FBXO33Q7Z6M2 555 aa25.57■■□□□ 1.68
SPSB3-206ENST00000564709 VSTM4Q8IW00 320 aa25.57■■□□□ 1.68
SPSB3-206ENST00000564709 ZNF579Q8NAF0 562 aaKnown RBP25.57■■□□□ 1.68
SPSB3-206ENST00000564709 KIF18AQ8NI77 898 aa25.57■■□□□ 1.68
SPSB3-206ENST00000564709 A0A087X0B3 334 aa25.57■■□□□ 1.68
SPSB3-206ENST00000564709 DHX58Q96C10 678 aa25.57■■□□□ 1.68
SPSB3-206ENST00000564709 EPSTI1Q96J88 318 aa25.57■■□□□ 1.68
SPSB3-206ENST00000564709 PRPF3O43395 683 aaKnown RBP25.56■■□□□ 1.68
SPSB3-206ENST00000564709 CBX1P83916 185 aa25.56■■□□□ 1.68
SPSB3-206ENST00000564709 LAMB1P07942 1786 aa25.56■■□□□ 1.68
SPSB3-206ENST00000564709 NRDCO43847 1150 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms