RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 GTF3C2Q8WUA4 911 aaPredicted RBP14.8□□□□□ -0.04
GTF3C1-204ENST00000564664 RNF208Q9H0X6 261 aa14.8□□□□□ -0.04
GTF3C1-204ENST00000564664 ASCC2Q9H1I8 757 aaPredicted RBP14.8□□□□□ -0.04
GTF3C1-204ENST00000564664 DNAJC18Q9H819 358 aa14.8□□□□□ -0.04
GTF3C1-204ENST00000564664 IL1RAPL2Q9NP60 686 aa14.8□□□□□ -0.04
GTF3C1-204ENST00000564664 SERPINB13Q9UIV8 391 aa14.8□□□□□ -0.04
GTF3C1-204ENST00000564664 COG6Q9Y2V7 657 aa14.8□□□□□ -0.04
GTF3C1-204ENST00000564664 ECM2O94769 699 aaPredicted RBP14.79□□□□□ -0.04
GTF3C1-204ENST00000564664 MYCP01106 439 aaPredicted RBP14.79□□□□□ -0.04
GTF3C1-204ENST00000564664 CCL5P13501 91 aa14.79□□□□□ -0.04
GTF3C1-204ENST00000564664 MTFR1Q15390 333 aa14.79□□□□□ -0.04
GTF3C1-204ENST00000564664 MIGA1Q8NAN2 632 aa14.79□□□□□ -0.04
GTF3C1-204ENST00000564664 ANTXR1Q9H6X2 564 aa14.79□□□□□ -0.04
GTF3C1-204ENST00000564664 MORF4L1Q9UBU8 362 aa14.79□□□□□ -0.04
GTF3C1-204ENST00000564664 SAP30BPQ9UHR5 308 aaKnown RBP14.79□□□□□ -0.04
GTF3C1-204ENST00000564664 ZBTB21Q9ULJ3 1066 aa14.79□□□□□ -0.04
GTF3C1-204ENST00000564664 GABRQQ9UN88 632 aa14.79□□□□□ -0.04
GTF3C1-204ENST00000564664 MKI67P46013 3256 aaKnown RBP14.79□□□□□ -0.04
GTF3C1-204ENST00000564664 MGAMO43451 1857 aa14.78□□□□□ -0.04
GTF3C1-204ENST00000564664 MAGEB6P1A0A0J9YX57 407 aa14.78□□□□□ -0.04
GTF3C1-204ENST00000564664 IRX3P78415 501 aaPredicted RBP14.78□□□□□ -0.04
GTF3C1-204ENST00000564664 MTMR2Q13614 643 aa14.78□□□□□ -0.04
GTF3C1-204ENST00000564664 SLC9C2Q5TAH2 1124 aa14.78□□□□□ -0.04
GTF3C1-204ENST00000564664 USP17L2Q6R6M4 530 aa14.78□□□□□ -0.04
GTF3C1-204ENST00000564664 SIRT2Q8IXJ6 389 aa14.78□□□□□ -0.04
GTF3C1-204ENST00000564664 RIOK1Q9BRS2 568 aaKnown RBP14.78□□□□□ -0.04
GTF3C1-204ENST00000564664 PCDH10Q9P2E7 1040 aa14.78□□□□□ -0.04
GTF3C1-204ENST00000564664 ZSWIM8A7E2V4 1837 aa14.78□□□□□ -0.04
GTF3C1-204ENST00000564664 FOCADQ5VW36 1801 aa14.78□□□□□ -0.04
GTF3C1-204ENST00000564664 BRCA2P51587 3418 aa14.77□□□□□ -0.04
GTF3C1-204ENST00000564664 SGPL1O95470 568 aa14.77□□□□□ -0.05
GTF3C1-204ENST00000564664 USP14P54578 494 aa14.77□□□□□ -0.05
GTF3C1-204ENST00000564664 CERKLQ49MI3 558 aaPredicted RBP14.77□□□□□ -0.05
GTF3C1-204ENST00000564664 GPRC5AQ8NFJ5 357 aa14.77□□□□□ -0.05
GTF3C1-204ENST00000564664 P2RX7Q99572 595 aaKnown RBP14.77□□□□□ -0.05
GTF3C1-204ENST00000564664 CRNKL1Q9BZJ0 848 aaKnown RBP14.77□□□□□ -0.05
GTF3C1-204ENST00000564664 CABP5Q9NP86 173 aa14.77□□□□□ -0.05
GTF3C1-204ENST00000564664 MYO5AQ9Y4I1 1855 aaKnown RBP14.76□□□□□ -0.05
GTF3C1-204ENST00000564664 ATAD5Q96QE3 1844 aa14.76□□□□□ -0.05
GTF3C1-204ENST00000564664 LOC285556D6RIA3 1793 aa14.76□□□□□ -0.05
GTF3C1-204ENST00000564664 GDF11O95390 407 aa14.76□□□□□ -0.05
GTF3C1-204ENST00000564664 POLR3DP05423 398 aaPredicted RBP14.76□□□□□ -0.05
GTF3C1-204ENST00000564664 PDE6AP16499 860 aa14.76□□□□□ -0.05
GTF3C1-204ENST00000564664 ATP5JP18859 108 aa14.76□□□□□ -0.05
GTF3C1-204ENST00000564664 JAG1P78504 1218 aa14.76□□□□□ -0.05
GTF3C1-204ENST00000564664 C12orf42Q96LP6 360 aa14.76□□□□□ -0.05
GTF3C1-204ENST00000564664 GJD2Q9UKL4 321 aa14.76□□□□□ -0.05
GTF3C1-204ENST00000564664 NDUFB9Q9Y6M9 179 aa14.76□□□□□ -0.05
GTF3C1-204ENST00000564664 CDK5RAP2Q96SN8 1893 aa14.76□□□□□ -0.05
GTF3C1-204ENST00000564664 GH2P01242 217 aa14.75□□□□□ -0.05
GTF3C1-204ENST00000564664 INHAP05111 366 aa14.75□□□□□ -0.05
GTF3C1-204ENST00000564664 HERVK_113P62684 666 aa14.75□□□□□ -0.05
GTF3C1-204ENST00000564664 ABCB5Q2M3G0 1257 aa14.75□□□□□ -0.05
GTF3C1-204ENST00000564664 UBE2Q1Q7Z7E8 422 aa14.75□□□□□ -0.05
GTF3C1-204ENST00000564664 U2AF1L4Q8WU68 220 aaKnown RBP14.75□□□□□ -0.05
GTF3C1-204ENST00000564664 HTATIP2Q9BUP3 242 aa14.75□□□□□ -0.05
GTF3C1-204ENST00000564664 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.75□□□□□ -0.052e-12■■■□□ 15
GTF3C1-204ENST00000564664 EMILIN3Q9NT22 766 aa14.75□□□□□ -0.05
GTF3C1-204ENST00000564664 DOCK3Q8IZD9 2030 aa14.75□□□□□ -0.05
GTF3C1-204ENST00000564664 ZNF532Q9HCE3 1301 aa14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 SIPA1L1O43166 1804 aa14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 TCRBV5S4A2TA0A5A2 114 aa14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 USP17L15C9J2P7 530 aa14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 USP17L13C9JLJ4 530 aa14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 USP17L11C9JVI0 530 aa14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 USP17L18D6R9N7 530 aa14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 USP17L22D6RA61 530 aa14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 USP17L17D6RBQ6 530 aa14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 USP17L19D6RCP7 530 aa14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 USP17L20D6RJB6 530 aa14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 APBB1O00213 710 aa14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 GOLIM4O00461 696 aa14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 XRCC5P13010 732 aaKnown RBP14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 MAPK4P31152 587 aa14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 PLCD1P51178 756 aa14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 USP17L24Q0WX57 530 aa14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 TRMT44Q8IYL2 757 aaKnown RBP14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 SHISA4Q96DD7 197 aa14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 DNAJC2Q99543 621 aaKnown RBP14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 KIAA1683Q9H0B3 1180 aa14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 UNC93B1Q9H1C4 597 aa14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 PAK6Q9NQU5 681 aaPredicted RBP14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 ATP8A2Q9NTI2 1148 aa14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 PAG1Q9NWQ8 432 aa14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 MYH1P12882 1939 aa14.74□□□□□ -0.05
GTF3C1-204ENST00000564664 TFRCP02786 760 aaKnown RBP14.73□□□□□ -0.05
GTF3C1-204ENST00000564664 ELNP15502 786 aa14.73□□□□□ -0.05
GTF3C1-204ENST00000564664 GABPAQ06546 454 aa14.73□□□□□ -0.05
GTF3C1-204ENST00000564664 HABP4Q5JVS0 413 aaKnown RBP14.73□□□□□ -0.05
GTF3C1-204ENST00000564664 SOCS4Q8WXH5 440 aa14.73□□□□□ -0.05
GTF3C1-204ENST00000564664 HAUS7Q99871 368 aa14.73□□□□□ -0.05
GTF3C1-204ENST00000564664 NUDT12Q9BQG2 462 aa14.73□□□□□ -0.05
GTF3C1-204ENST00000564664 LRRCC1Q9C099 1032 aa14.73□□□□□ -0.05
GTF3C1-204ENST00000564664 MCM9Q9NXL9 1143 aa14.73□□□□□ -0.05
GTF3C1-204ENST00000564664 RBPJLQ9UBG7 517 aa14.73□□□□□ -0.05
GTF3C1-204ENST00000564664 SWAP70Q9UH65 585 aa14.73□□□□□ -0.05
GTF3C1-204ENST00000564664 HMGCRP04035 888 aa14.72□□□□□ -0.05
GTF3C1-204ENST00000564664 SHMT1P34896 483 aa14.72□□□□□ -0.05
GTF3C1-204ENST00000564664 CCNA1P78396 465 aa14.72□□□□□ -0.05
GTF3C1-204ENST00000564664 RAB3GAP1Q15042 981 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms