RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 DDRGK1Q96HY6 314 aa22.1■■□□□ 1.13
SYNGR3-204ENST00000564642 PARK7Q99497 189 aaKnown RBP22.1■■□□□ 1.13
SYNGR3-204ENST00000564642 TATDN1Q6P1N9 297 aa22.09■■□□□ 1.13
SYNGR3-204ENST00000564642 OTOP1Q7RTM1 612 aa22.09■■□□□ 1.13
SYNGR3-204ENST00000564642 PI4K2BQ8TCG2 481 aa22.09■■□□□ 1.13
SYNGR3-204ENST00000564642 PUS7LQ9H0K6 701 aaKnown RBP22.09■■□□□ 1.13
SYNGR3-204ENST00000564642 EFCC1Q9HA90 598 aa22.09■■□□□ 1.13
SYNGR3-204ENST00000564642 SLC45A1Q9Y2W3 748 aa22.09■■□□□ 1.13
SYNGR3-204ENST00000564642 RNF113AO15541 343 aaKnown RBP22.08■■□□□ 1.13
SYNGR3-204ENST00000564642 PRKAB2O43741 272 aa22.08■■□□□ 1.13
SYNGR3-204ENST00000564642 ZFYP08048 801 aaPredicted RBP22.08■■□□□ 1.13
SYNGR3-204ENST00000564642 CERKLQ49MI3 558 aaPredicted RBP22.08■■□□□ 1.13
SYNGR3-204ENST00000564642 AMOTL1Q8IY63 956 aa22.08■■□□□ 1.13
SYNGR3-204ENST00000564642 PROCA1Q8NCQ7 364 aaPredicted RBP22.08■■□□□ 1.13
SYNGR3-204ENST00000564642 WDR18Q9BV38 432 aa22.08■■□□□ 1.13
SYNGR3-204ENST00000564642 CPA4Q9UI42 421 aa22.08■■□□□ 1.13
SYNGR3-204ENST00000564642 ZBTB21Q9ULJ3 1066 aa22.08■■□□□ 1.13
SYNGR3-204ENST00000564642 AGTPBP1Q9UPW5 1226 aa22.08■■□□□ 1.13
SYNGR3-204ENST00000564642 SLC4A4Q9Y6R1 1079 aa22.08■■□□□ 1.13
SYNGR3-204ENST00000564642 DDX60LQ5H9U9 1706 aaKnown RBP22.08■■□□□ 1.12
SYNGR3-204ENST00000564642 BAZ2AQ9UIF9 1905 aaKnown RBP22.08■■□□□ 1.12
SYNGR3-204ENST00000564642 HMGCS2P54868 508 aa22.07■■□□□ 1.12
SYNGR3-204ENST00000564642 JAG1P78504 1218 aa22.07■■□□□ 1.12
SYNGR3-204ENST00000564642 C17orf99Q6UX52 265 aa22.07■■□□□ 1.12
SYNGR3-204ENST00000564642 APPBP2Q92624 585 aa22.07■■□□□ 1.12
SYNGR3-204ENST00000564642 CABP5Q9NP86 173 aa22.07■■□□□ 1.12
SYNGR3-204ENST00000564642 HPS5Q9UPZ3 1129 aa22.07■■□□□ 1.12
SYNGR3-204ENST00000564642 GH2P01242 217 aa22.06■■□□□ 1.12
SYNGR3-204ENST00000564642 CYP2C8P10632 490 aa22.06■■□□□ 1.12
SYNGR3-204ENST00000564642 B4GALNT3Q6L9W6 998 aa22.06■■□□□ 1.12
SYNGR3-204ENST00000564642 C19orf81C9J6K1 198 aa22.05■■□□□ 1.12
SYNGR3-204ENST00000564642 USP17L10C9JJH3 530 aa22.05■■□□□ 1.12
SYNGR3-204ENST00000564642 IGHDP01880 384 aa22.05■■□□□ 1.12
SYNGR3-204ENST00000564642 LACTBP83111 547 aaPredicted RBP22.05■■□□□ 1.12
SYNGR3-204ENST00000564642 PABPC4Q13310 644 aaKnown RBP eCLIP22.05■■□□□ 1.12
SYNGR3-204ENST00000564642 MTMR2Q13614 643 aa22.05■■□□□ 1.12
SYNGR3-204ENST00000564642 ABCB5Q2M3G0 1257 aa22.05■■□□□ 1.12
SYNGR3-204ENST00000564642 SHROOM1Q2M3G4 852 aaPredicted RBP22.05■■□□□ 1.12
SYNGR3-204ENST00000564642 SH3D19Q5HYK7 790 aa22.05■■□□□ 1.12
SYNGR3-204ENST00000564642 SMC5Q8IY18 1101 aa22.05■■□□□ 1.12
SYNGR3-204ENST00000564642 FSD1Q9BTV5 496 aa22.05■■□□□ 1.12
SYNGR3-204ENST00000564642 TMOD4Q9NZQ9 345 aa22.05■■□□□ 1.12
SYNGR3-204ENST00000564642 PNMA3Q9UL41 463 aa22.05■■□□□ 1.12
SYNGR3-204ENST00000564642 SALL3Q9BXA9 1300 aa22.05■■□□□ 1.12
SYNGR3-204ENST00000564642 CYP2D6P10635 497 aa22.04■■□□□ 1.12
SYNGR3-204ENST00000564642 SHMT1P34896 483 aa22.04■■□□□ 1.12
SYNGR3-204ENST00000564642 BACE1P56817 501 aa22.04■■□□□ 1.12
SYNGR3-204ENST00000564642 GABPAQ06546 454 aa22.04■■□□□ 1.12
SYNGR3-204ENST00000564642 RAB3GAP1Q15042 981 aa22.04■■□□□ 1.12
SYNGR3-204ENST00000564642 TREML2Q5T2D2 321 aa22.04■■□□□ 1.12
SYNGR3-204ENST00000564642 SMCR8Q8TEV9 937 aaPredicted RBP22.04■■□□□ 1.12
SYNGR3-204ENST00000564642 OSBP2Q969R2 916 aa22.04■■□□□ 1.12
SYNGR3-204ENST00000564642 STRBPQ96SI9 672 aaKnown RBP22.04■■□□□ 1.12
SYNGR3-204ENST00000564642 LNPKQ9C0E8 428 aa22.04■■□□□ 1.12
SYNGR3-204ENST00000564642 STAP2Q9UGK3 403 aa22.04■■□□□ 1.12
SYNGR3-204ENST00000564642 PTPN22Q9Y2R2 807 aa22.04■■□□□ 1.12
SYNGR3-204ENST00000564642 LOC285556D6RIA3 1793 aa22.04■■□□□ 1.12
SYNGR3-204ENST00000564642 MYH8P13535 1937 aa22.04■■□□□ 1.12
SYNGR3-204ENST00000564642 ADGRA2Q96PE1 1338 aa22.04■■□□□ 1.12
SYNGR3-204ENST00000564642 USP17L12C9JPN9 530 aa22.03■■□□□ 1.12
SYNGR3-204ENST00000564642 USP17L21D6R901 530 aa22.03■■□□□ 1.12
SYNGR3-204ENST00000564642 OSBPP22059 807 aa22.03■■□□□ 1.12
SYNGR3-204ENST00000564642 PDE1AP54750 535 aa22.03■■□□□ 1.12
SYNGR3-204ENST00000564642 SWAP70Q9UH65 585 aa22.03■■□□□ 1.12
SYNGR3-204ENST00000564642 TAOK2Q9UL54 1235 aa22.03■■□□□ 1.12
SYNGR3-204ENST00000564642 ECM2O94769 699 aaPredicted RBP22.02■■□□□ 1.12
SYNGR3-204ENST00000564642 IRX6P78412 446 aaPredicted RBP22.02■■□□□ 1.12
SYNGR3-204ENST00000564642 CAP1Q01518 475 aa22.02■■□□□ 1.12
SYNGR3-204ENST00000564642 EVX2Q03828 476 aa22.02■■□□□ 1.12
SYNGR3-204ENST00000564642 C12orf60Q5U649 245 aa22.02■■□□□ 1.12
SYNGR3-204ENST00000564642 ARHGAP39Q9C0H5 1083 aa22.02■■□□□ 1.12
SYNGR3-204ENST00000564642 MPHOSPH10O00566 681 aaKnown RBP22.01■■□□□ 1.11
SYNGR3-204ENST00000564642 GNRH1P01148 92 aa22.01■■□□□ 1.11
SYNGR3-204ENST00000564642 GNAT2P19087 354 aa22.01■■□□□ 1.11
SYNGR3-204ENST00000564642 CTR9Q6PD62 1173 aa22.01■■□□□ 1.11
SYNGR3-204ENST00000564642 DYNLL2Q96FJ2 89 aa22.01■■□□□ 1.11
SYNGR3-204ENST00000564642 GPAA1O43292 621 aa22■■□□□ 1.11
SYNGR3-204ENST00000564642 BCRP11274 1271 aa22■■□□□ 1.11
SYNGR3-204ENST00000564642 PSMC4P43686 418 aa22■■□□□ 1.11
SYNGR3-204ENST00000564642 USP17L2Q6R6M4 530 aa22■■□□□ 1.11
SYNGR3-204ENST00000564642 CHD1LQ86WJ1 897 aa22■■□□□ 1.11
SYNGR3-204ENST00000564642 EVI5LQ96CN4 794 aa22■■□□□ 1.11
SYNGR3-204ENST00000564642 FEZ1Q99689 392 aa22■■□□□ 1.11
SYNGR3-204ENST00000564642 ARPP21Q9UBL0 812 aaPredicted RBP22■■□□□ 1.11
SYNGR3-204ENST00000564642 ZSWIM8A7E2V4 1837 aa21.99■■□□□ 1.11
SYNGR3-204ENST00000564642 CYP2D7A0A087X1C5 515 aa21.99■■□□□ 1.11
SYNGR3-204ENST00000564642 FMNL1O95466 1100 aaPredicted RBP21.99■■□□□ 1.11
SYNGR3-204ENST00000564642 APPP05067 770 aa21.99■■□□□ 1.11
SYNGR3-204ENST00000564642 HOXD10P28358 340 aa21.99■■□□□ 1.11
SYNGR3-204ENST00000564642 GIMAP6Q6P9H5 292 aa21.99■■□□□ 1.11
SYNGR3-204ENST00000564642 SLC44A5Q8NCS7 719 aa21.99■■□□□ 1.11
SYNGR3-204ENST00000564642 GSG1L2A8MUP6 293 aa21.98■■□□□ 1.11
SYNGR3-204ENST00000564642 M0R2C6 588 aa21.98■■□□□ 1.11
SYNGR3-204ENST00000564642 CDK8P49336 464 aa21.98■■□□□ 1.11
SYNGR3-204ENST00000564642 USP14P54578 494 aa21.98■■□□□ 1.11
SYNGR3-204ENST00000564642 IRX3P78415 501 aaPredicted RBP21.98■■□□□ 1.11
SYNGR3-204ENST00000564642 NUCB1Q02818 461 aa21.98■■□□□ 1.11
SYNGR3-204ENST00000564642 SEPT2Q15019 361 aa21.98■■□□□ 1.11
SYNGR3-204ENST00000564642 ZYXQ15942 572 aaKnown RBP21.98■■□□□ 1.11
SYNGR3-204ENST00000564642 ANKRD13CQ8N6S4 541 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms