RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 CCDC27Q2M243 656 aa5.88□□□□□ -1.47
CAPN3-212ENST00000564503 USPL1Q5W0Q7 1092 aa5.88□□□□□ -1.47
CAPN3-212ENST00000564503 RNF43Q68DV7 783 aa5.88□□□□□ -1.47
CAPN3-212ENST00000564503 FDX2Q6P4F2 183 aa5.88□□□□□ -1.47
CAPN3-212ENST00000564503 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-212ENST00000564503 HSCBQ8IWL3 235 aa5.88□□□□□ -1.47
CAPN3-212ENST00000564503 PKNOX2Q96KN3 472 aa5.88□□□□□ -1.47
CAPN3-212ENST00000564503 FAM83CQ9BQN1 747 aa5.88□□□□□ -1.47
CAPN3-212ENST00000564503 USP26Q9BXU7 913 aa5.88□□□□□ -1.47
CAPN3-212ENST00000564503 C22orf23Q9BZE7 217 aa5.88□□□□□ -1.47
CAPN3-212ENST00000564503 MYH16Q9H6N6 1097 aa5.88□□□□□ -1.47
CAPN3-212ENST00000564503 GRPEL1Q9HAV7 217 aa5.88□□□□□ -1.47
CAPN3-212ENST00000564503 PCMTD2Q9NV79 361 aa5.88□□□□□ -1.47
CAPN3-212ENST00000564503 PLCH2O75038 1416 aa5.88□□□□□ -1.47
CAPN3-212ENST00000564503 ADGRB3O60242 1522 aa5.88□□□□□ -1.47
CAPN3-212ENST00000564503 A0A096LPE4 126 aa5.87□□□□□ -1.47
CAPN3-212ENST00000564503 LOC100289279A0A1B0GTE1 492 aa5.87□□□□□ -1.47
CAPN3-212ENST00000564503 A0A1W2PPZ6 126 aa5.87□□□□□ -1.47
CAPN3-212ENST00000564503 MED26O95402 600 aa5.87□□□□□ -1.47
CAPN3-212ENST00000564503 DLGAP3O95886 979 aa5.87□□□□□ -1.47
CAPN3-212ENST00000564503 TPM2P07951 284 aa5.87□□□□□ -1.47
CAPN3-212ENST00000564503 CT47B1P0C2W7 299 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-212ENST00000564503 GSTM4Q03013 218 aa5.87□□□□□ -1.47
CAPN3-212ENST00000564503 MVPQ14764 893 aaKnown RBP5.87□□□□□ -1.47
CAPN3-212ENST00000564503 SPRED3Q2MJR0 410 aa5.87□□□□□ -1.47
CAPN3-212ENST00000564503 SKOR2Q2VWA4 1001 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-212ENST00000564503 NUTM2GQ5VZR2 741 aa5.87□□□□□ -1.47
CAPN3-212ENST00000564503 BEND4Q6ZU67 534 aa5.87□□□□□ -1.47
CAPN3-212ENST00000564503 TXNDC2Q86VQ3 553 aa5.87□□□□□ -1.47
CAPN3-212ENST00000564503 ZDHHC13Q8IUH4 622 aa5.87□□□□□ -1.47
CAPN3-212ENST00000564503 CCNJLQ8IV13 435 aa5.87□□□□□ -1.47
CAPN3-212ENST00000564503 C12orf50Q8NA57 414 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-212ENST00000564503 PSMG3-AS1Q96PY0 264 aa5.87□□□□□ -1.47
CAPN3-212ENST00000564503 TCF12Q99081 682 aa5.87□□□□□ -1.47
CAPN3-212ENST00000564503 TMPRSS13Q9BYE2 586 aa5.87□□□□□ -1.47
CAPN3-212ENST00000564503 KRTAP4-8Q9BYQ9 185 aa5.87□□□□□ -1.47
CAPN3-212ENST00000564503 KCNF1Q9H3M0 494 aa5.87□□□□□ -1.47
CAPN3-212ENST00000564503 NSD3Q9BZ95 1437 aa5.87□□□□□ -1.47
CAPN3-212ENST00000564503 PIK3C2BO00750 1634 aa5.87□□□□□ -1.47
CAPN3-212ENST00000564503 CACNA1FO60840 1977 aa5.87□□□□□ -1.47
CAPN3-212ENST00000564503 N4BP2Q86UW6 1770 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-212ENST00000564503 CDC42BPGQ6DT37 1551 aa5.86□□□□□ -1.47
CAPN3-212ENST00000564503 FANCAO15360 1455 aa5.86□□□□□ -1.47
CAPN3-212ENST00000564503 NDUFB5O43674 189 aa5.86□□□□□ -1.47
CAPN3-212ENST00000564503 TGFB1P01137 390 aa5.86□□□□□ -1.47
CAPN3-212ENST00000564503 GRIA4P48058 902 aa5.86□□□□□ -1.47
CAPN3-212ENST00000564503 CD97P48960 835 aa5.86□□□□□ -1.47
CAPN3-212ENST00000564503 ZNF423Q2M1K9 1284 aa5.86□□□□□ -1.47
CAPN3-212ENST00000564503 EXOSC6Q5RKV6 272 aaKnown RBP5.86□□□□□ -1.47
CAPN3-212ENST00000564503 ZKSCAN2Q63HK3 967 aa5.86□□□□□ -1.47
CAPN3-212ENST00000564503 RETREG2Q8NC44 543 aa5.86□□□□□ -1.47
CAPN3-212ENST00000564503 SMG8Q8ND04 991 aaKnown RBP5.86□□□□□ -1.47
CAPN3-212ENST00000564503 SNX21Q969T3 373 aa5.86□□□□□ -1.47
CAPN3-212ENST00000564503 TRIM44Q96DX7 344 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-212ENST00000564503 GBP4Q96PP9 640 aa5.86□□□□□ -1.47
CAPN3-212ENST00000564503 DBNDD2Q9BQY9 259 aa5.86□□□□□ -1.47
CAPN3-212ENST00000564503 PANK2Q9BZ23 570 aa5.86□□□□□ -1.47
CAPN3-212ENST00000564503 LIN7BQ9HAP6 207 aa5.86□□□□□ -1.47
CAPN3-212ENST00000564503 ITSN1Q15811 1721 aa5.85□□□□□ -1.47
CAPN3-212ENST00000564503 UGGT1Q9NYU2 1555 aa5.85□□□□□ -1.47
CAPN3-212ENST00000564503 LMTK2Q8IWU2 1503 aa5.85□□□□□ -1.47
CAPN3-212ENST00000564503 UHRF1BP1LA0JNW5 1464 aa5.85□□□□□ -1.47
CAPN3-212ENST00000564503 ARHGAP31Q2M1Z3 1444 aa5.85□□□□□ -1.47
CAPN3-212ENST00000564503 NSD2O96028 1365 aa5.85□□□□□ -1.47
CAPN3-212ENST00000564503 GAS2O43903 313 aaKnown RBP5.85□□□□□ -1.47
CAPN3-212ENST00000564503 COBLO75128 1261 aa5.85□□□□□ -1.47
CAPN3-212ENST00000564503 TIAF1O95411 115 aa5.85□□□□□ -1.47
CAPN3-212ENST00000564503 MFAP1P55081 439 aaKnown RBP5.85□□□□□ -1.47
CAPN3-212ENST00000564503 PCDH1Q08174 1060 aa5.85□□□□□ -1.47
CAPN3-212ENST00000564503 ORC1Q13415 861 aa5.85□□□□□ -1.47
CAPN3-212ENST00000564503 HDAC1Q13547 482 aaPredicted RBP5.85□□□□□ -1.47
CAPN3-212ENST00000564503 KIAA0319Q5VV43 1072 aa5.85□□□□□ -1.47
CAPN3-212ENST00000564503 CFAP53Q96M91 514 aa5.85□□□□□ -1.47
CAPN3-212ENST00000564503 CITED4Q96RK1 184 aa5.85□□□□□ -1.47
CAPN3-212ENST00000564503 FAM129BQ96TA1 746 aa5.85□□□□□ -1.47
CAPN3-212ENST00000564503 CLEC4MQ9H2X3 399 aaPredicted RBP5.85□□□□□ -1.47
CAPN3-212ENST00000564503 SUGCTQ9HAC7 445 aa5.85□□□□□ -1.47
CAPN3-212ENST00000564503 CYP4F12Q9HCS2 524 aa5.85□□□□□ -1.47
CAPN3-212ENST00000564503 HIF3AQ9Y2N7 669 aa5.85□□□□□ -1.47
CAPN3-212ENST00000564503 KNDC1Q76NI1 1749 aa5.85□□□□□ -1.47
CAPN3-212ENST00000564503 SIGLEC1Q9BZZ2 1709 aa5.85□□□□□ -1.47
CAPN3-212ENST00000564503 ADGRB1O14514 1584 aa5.84□□□□□ -1.47
CAPN3-212ENST00000564503 HECW2Q9P2P5 1572 aa5.84□□□□□ -1.47
CAPN3-212ENST00000564503 TRAPPC8Q9Y2L5 1435 aa5.84□□□□□ -1.47
CAPN3-212ENST00000564503 ABCC11Q96J66 1382 aa5.84□□□□□ -1.47
CAPN3-212ENST00000564503 IBTKQ9P2D0 1353 aaPredicted RBP5.84□□□□□ -1.47
CAPN3-212ENST00000564503 PRR19A6NJB7 356 aa5.84□□□□□ -1.47
CAPN3-212ENST00000564503 EIF4EBP3O60516 100 aaPredicted RBP5.84□□□□□ -1.47
CAPN3-212ENST00000564503 CPNE3O75131 537 aaKnown RBP5.84□□□□□ -1.47
CAPN3-212ENST00000564503 RLBP1P12271 317 aa5.84□□□□□ -1.47
CAPN3-212ENST00000564503 DRD2P14416 443 aa5.84□□□□□ -1.47
CAPN3-212ENST00000564503 MAP4P27816 1152 aaKnown RBP5.84□□□□□ -1.47
CAPN3-212ENST00000564503 DDIT3P35638 169 aa5.84□□□□□ -1.47
CAPN3-212ENST00000564503 RBM25P49756 843 aaKnown RBP5.84□□□□□ -1.47
CAPN3-212ENST00000564503 PDE4CQ08493 712 aa5.84□□□□□ -1.47
CAPN3-212ENST00000564503 CCDC173Q0VFZ6 552 aa5.84□□□□□ -1.47
CAPN3-212ENST00000564503 SGO2Q562F6 1265 aa5.84□□□□□ -1.47
CAPN3-212ENST00000564503 MORC1Q86VD1 984 aa5.84□□□□□ -1.47
CAPN3-212ENST00000564503 SMC5Q8IY18 1101 aa5.84□□□□□ -1.47
CAPN3-212ENST00000564503 FTSJ3Q8IY81 847 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms