RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 RRP12Q5JTH9 1297 aaKnown RBP22.16■■□□□ 1.14
SPNS1-206ENST00000564476 PPP4R3BQ5MIZ7 849 aa22.16■■□□□ 1.14
SPNS1-206ENST00000564476 CHADLQ6NUI6 762 aa22.16■■□□□ 1.14
SPNS1-206ENST00000564476 IQCA1Q86XH1 822 aa22.16■■□□□ 1.14
SPNS1-206ENST00000564476 STK11IPQ8N1F8 1099 aa22.16■■□□□ 1.14
SPNS1-206ENST00000564476 ZNF341Q9BYN7 854 aa22.16■■□□□ 1.14
SPNS1-206ENST00000564476 DNAJC18Q9H819 358 aa22.16■■□□□ 1.14
SPNS1-206ENST00000564476 INCENPQ9NQS7 918 aa22.16■■□□□ 1.14
SPNS1-206ENST00000564476 TCP11L1Q9NUJ3 509 aa22.16■■□□□ 1.14
SPNS1-206ENST00000564476 TSPY2A6NKD2 308 aa22.15■■□□□ 1.14
SPNS1-206ENST00000564476 KDM4AO75164 1064 aa22.15■■□□□ 1.14
SPNS1-206ENST00000564476 PRDM1O75626 825 aa22.15■■□□□ 1.14
SPNS1-206ENST00000564476 SART3Q15020 963 aaKnown RBP22.15■■□□□ 1.14
SPNS1-206ENST00000564476 NEDD1Q8NHV4 660 aa22.15■■□□□ 1.14
SPNS1-206ENST00000564476 TMEM87BQ96K49 555 aa22.15■■□□□ 1.14
SPNS1-206ENST00000564476 SCAF8Q9UPN6 1271 aaKnown RBP22.15■■□□□ 1.14
SPNS1-206ENST00000564476 ADM5C9JUS6 153 aa22.14■■□□□ 1.13
SPNS1-206ENST00000564476 PPP1R12BO60237 982 aaPredicted RBP22.14■■□□□ 1.13
SPNS1-206ENST00000564476 TSPY3P0CV98 308 aa22.14■■□□□ 1.13
SPNS1-206ENST00000564476 TSPY8P0CW00 308 aa22.14■■□□□ 1.13
SPNS1-206ENST00000564476 NEK4P51957 841 aa22.14■■□□□ 1.13
SPNS1-206ENST00000564476 TFAP4Q01664 338 aa22.14■■□□□ 1.13
SPNS1-206ENST00000564476 ANKRD1Q15327 319 aa22.14■■□□□ 1.13
SPNS1-206ENST00000564476 MAP1SQ66K74 1059 aaPredicted RBP22.14■■□□□ 1.13
SPNS1-206ENST00000564476 MIGA2Q7L4E1 593 aa22.14■■□□□ 1.13
SPNS1-206ENST00000564476 CDAN1Q8IWY9 1227 aa22.14■■□□□ 1.13
SPNS1-206ENST00000564476 TMTC2Q8N394 836 aa22.14■■□□□ 1.13
SPNS1-206ENST00000564476 SLC44A5Q8NCS7 719 aa22.14■■□□□ 1.13
SPNS1-206ENST00000564476 CDCA5Q96FF9 252 aa22.14■■□□□ 1.13
SPNS1-206ENST00000564476 GLIS2Q9BZE0 524 aaPredicted RBP22.14■■□□□ 1.13
SPNS1-206ENST00000564476 PDRG1Q9NUG6 133 aa22.14■■□□□ 1.13
SPNS1-206ENST00000564476 ZNF112Q9UJU3 913 aa22.14■■□□□ 1.13
SPNS1-206ENST00000564476 ST18O60284 1047 aa22.13■■□□□ 1.13
SPNS1-206ENST00000564476 KLRG1Q96E93 195 aa22.13■■□□□ 1.13
SPNS1-206ENST00000564476 CABP5Q9NP86 173 aa22.13■■□□□ 1.13
SPNS1-206ENST00000564476 ERICH2A1L162 156 aa22.12■■□□□ 1.13
SPNS1-206ENST00000564476 UNCXA6NJT0 531 aa22.12■■□□□ 1.13
SPNS1-206ENST00000564476 PHF20L1A8MW92 1017 aa22.12■■□□□ 1.13
SPNS1-206ENST00000564476 PRC1O43663 620 aa22.12■■□□□ 1.13
SPNS1-206ENST00000564476 CTNND1O60716 968 aaKnown RBP22.12■■□□□ 1.13
SPNS1-206ENST00000564476 MCM2P49736 904 aa22.12■■□□□ 1.13
SPNS1-206ENST00000564476 TTC14Q96N46 770 aa22.12■■□□□ 1.13
SPNS1-206ENST00000564476 UBAC1Q9BSL1 405 aa22.12■■□□□ 1.13
SPNS1-206ENST00000564476 UPF3BQ9BZI7 483 aaKnown RBP22.12■■□□□ 1.13
SPNS1-206ENST00000564476 PLIN4Q96Q06 1357 aa22.12■■□□□ 1.13
SPNS1-206ENST00000564476 CAP2P40123 477 aa22.11■■□□□ 1.13
SPNS1-206ENST00000564476 ABCB5Q2M3G0 1257 aa22.11■■□□□ 1.13
SPNS1-206ENST00000564476 FAM47AQ5JRC9 791 aa22.11■■□□□ 1.13
SPNS1-206ENST00000564476 PRAMEF18Q5VWM3 479 aa22.11■■□□□ 1.13
SPNS1-206ENST00000564476 TMEM179Q6ZVK1 233 aa22.11■■□□□ 1.13
SPNS1-206ENST00000564476 CYB5R4Q7L1T6 521 aa22.11■■□□□ 1.13
SPNS1-206ENST00000564476 DGKHQ86XP1 1220 aa22.11■■□□□ 1.13
SPNS1-206ENST00000564476 ZSCAN10Q96SZ4 725 aaPredicted RBP22.11■■□□□ 1.13
SPNS1-206ENST00000564476 AGXT2Q9BYV1 514 aa22.11■■□□□ 1.13
SPNS1-206ENST00000564476 LIFRP42702 1097 aa22.1■■□□□ 1.13
SPNS1-206ENST00000564476 ANTXR2P58335 489 aa22.1■■□□□ 1.13
SPNS1-206ENST00000564476 FKBP1BP68106 108 aa22.1■■□□□ 1.13
SPNS1-206ENST00000564476 FGD1P98174 961 aa22.1■■□□□ 1.13
SPNS1-206ENST00000564476 IGDCC4Q8TDY8 1250 aa22.1■■□□□ 1.13
SPNS1-206ENST00000564476 ANKS1AQ92625 1134 aa22.1■■□□□ 1.13
SPNS1-206ENST00000564476 KANSL2Q9H9L4 492 aa22.1■■□□□ 1.13
SPNS1-206ENST00000564476 FAM196BA6NMK8 535 aa22.09■■□□□ 1.13
SPNS1-206ENST00000564476 IFIT3O14879 490 aaKnown RBP22.09■■□□□ 1.13
SPNS1-206ENST00000564476 USP2O75604 605 aaPredicted RBP22.09■■□□□ 1.13
SPNS1-206ENST00000564476 ASNSP08243 561 aa22.09■■□□□ 1.13
SPNS1-206ENST00000564476 AKR1B1P15121 316 aa22.09■■□□□ 1.13
SPNS1-206ENST00000564476 IREB2P48200 963 aaKnown RBP22.09■■□□□ 1.13
SPNS1-206ENST00000564476 NOVP48745 357 aa22.09■■□□□ 1.13
SPNS1-206ENST00000564476 COL9A3Q14050 684 aaPredicted RBP22.09■■□□□ 1.13
SPNS1-206ENST00000564476 MAP3K11Q16584 847 aa22.09■■□□□ 1.13
SPNS1-206ENST00000564476 ARMC9Q7Z3E5 817 aa22.09■■□□□ 1.13
SPNS1-206ENST00000564476 NKX2-3Q8TAU0 364 aa22.09■■□□□ 1.13
SPNS1-206ENST00000564476 ANGEL1Q9UNK9 670 aaKnown RBP22.09■■□□□ 1.13
SPNS1-206ENST00000564476 GREB1LQ9C091 1923 aaPredicted RBP22.09■■□□□ 1.13
SPNS1-206ENST00000564476 IGKV6D-41A0A0C4DH26 115 aa22.08■■□□□ 1.13
SPNS1-206ENST00000564476 ITGBL1O95965 494 aaPredicted RBP22.08■■□□□ 1.13
SPNS1-206ENST00000564476 CPA1P15085 419 aa22.08■■□□□ 1.13
SPNS1-206ENST00000564476 MAP3K9P80192 1104 aa22.08■■□□□ 1.13
SPNS1-206ENST00000564476 TMEM67Q5HYA8 995 aa22.08■■□□□ 1.13
SPNS1-206ENST00000564476 SNX21Q969T3 373 aa22.08■■□□□ 1.13
SPNS1-206ENST00000564476 RBM19Q9Y4C8 960 aaKnown RBP22.08■■□□□ 1.13
SPNS1-206ENST00000564476 MPHOSPH10O00566 681 aaKnown RBP22.07■■□□□ 1.12
SPNS1-206ENST00000564476 SLURP2P0DP57 97 aa22.07■■□□□ 1.12
SPNS1-206ENST00000564476 WTAPQ15007 396 aa22.07■■□□□ 1.12
SPNS1-206ENST00000564476 NOL9Q5SY16 702 aaKnown RBP22.07■■□□□ 1.12
SPNS1-206ENST00000564476 Q6ZUG5 572 aa22.07■■□□□ 1.12
SPNS1-206ENST00000564476 CHST3Q7LGC8 479 aa22.07■■□□□ 1.12
SPNS1-206ENST00000564476 JMYQ8N9B5 988 aa22.07■■□□□ 1.12
SPNS1-206ENST00000564476 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.07■■□□□ 1.12
SPNS1-206ENST00000564476 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.07■■□□□ 1.12
SPNS1-206ENST00000564476 MTMR4Q9NYA4 1195 aa22.07■■□□□ 1.12
SPNS1-206ENST00000564476 SYNPO2Q9UMS6 1093 aa22.07■■□□□ 1.12
SPNS1-206ENST00000564476 TNKSO95271 1327 aa22.06■■□□□ 1.12
SPNS1-206ENST00000564476 PASKQ96RG2 1323 aa22.06■■□□□ 1.12
SPNS1-206ENST00000564476 SH2B2O14492 632 aaPredicted RBP22.06■■□□□ 1.12
SPNS1-206ENST00000564476 GH2P01242 217 aa22.06■■□□□ 1.12
SPNS1-206ENST00000564476 EVCP57679 992 aa22.06■■□□□ 1.12
SPNS1-206ENST00000564476 SEC23AQ15436 765 aa22.06■■□□□ 1.12
SPNS1-206ENST00000564476 WRNIP1Q96S55 665 aa22.06■■□□□ 1.12
SPNS1-206ENST00000564476 TBC1D2Q9BYX2 928 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms