RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 SDSP20132 328 aa20.75■□□□□ 0.91
USB1-209ENST00000564387 LBX1P52954 281 aa20.75■□□□□ 0.91
USB1-209ENST00000564387 CCL15Q16663 113 aa20.75■□□□□ 0.91
USB1-209ENST00000564387 RILPL2Q969X0 211 aa20.75■□□□□ 0.91
USB1-209ENST00000564387 DDRGK1Q96HY6 314 aa20.75■□□□□ 0.91
USB1-209ENST00000564387 WDR18Q9BV38 432 aa20.75■□□□□ 0.91
USB1-209ENST00000564387 TRIM34Q9BYJ4 488 aa20.75■□□□□ 0.91
USB1-209ENST00000564387 ARPP21Q9UBL0 812 aaPredicted RBP20.75■□□□□ 0.91
USB1-209ENST00000564387 A0A0G2JLL6 359 aaPredicted RBP20.74■□□□□ 0.91
USB1-209ENST00000564387 USP17L5A8MUK1 530 aa20.74■□□□□ 0.91
USB1-209ENST00000564387 MCMDC2Q4G0Z9 681 aa20.74■□□□□ 0.91
USB1-209ENST00000564387 OTUD7BQ6GQQ9 843 aa20.74■□□□□ 0.91
USB1-209ENST00000564387 PRRT2Q7Z6L0 340 aaPredicted RBP20.74■□□□□ 0.91
USB1-209ENST00000564387 FAM227BQ96M60 508 aa20.74■□□□□ 0.91
USB1-209ENST00000564387 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.74■□□□□ 0.91
USB1-209ENST00000564387 SWAP70Q9UH65 585 aa20.74■□□□□ 0.91
USB1-209ENST00000564387 PTPRFP10586 1907 aa20.73■□□□□ 0.91
USB1-209ENST00000564387 A0A0D9SFI3 127 aa20.73■□□□□ 0.91
USB1-209ENST00000564387 NEFLP07196 543 aa20.73■□□□□ 0.91
USB1-209ENST00000564387 C16orf86Q6ZW13 317 aa20.73■□□□□ 0.91
USB1-209ENST00000564387 IFNL3Q8IZI9 196 aa20.73■□□□□ 0.91
USB1-209ENST00000564387 TSKSQ9UJT2 592 aa20.73■□□□□ 0.91
USB1-209ENST00000564387 ZBTB21Q9ULJ3 1066 aa20.73■□□□□ 0.91
USB1-209ENST00000564387 ROBO3Q96MS0 1386 aa20.72■□□□□ 0.91
USB1-209ENST00000564387 CYP2D7A0A087X1C5 515 aa20.72■□□□□ 0.91
USB1-209ENST00000564387 BTBD19C9JJ37 291 aa20.72■□□□□ 0.91
USB1-209ENST00000564387 SMIM22K7EJ46 135 aa20.72■□□□□ 0.91
USB1-209ENST00000564387 NMIQ13287 307 aaPredicted RBP20.72■□□□□ 0.91
USB1-209ENST00000564387 SHROOM1Q2M3G4 852 aaPredicted RBP20.72■□□□□ 0.91
USB1-209ENST00000564387 CERKLQ49MI3 558 aaPredicted RBP20.72■□□□□ 0.91
USB1-209ENST00000564387 CCDC84Q86UT8 332 aaPredicted RBP20.72■□□□□ 0.91
USB1-209ENST00000564387 AMOTL1Q8IY63 956 aa20.72■□□□□ 0.91
USB1-209ENST00000564387 FAM43AQ8N2R8 423 aa20.72■□□□□ 0.91
USB1-209ENST00000564387 ZNF280CQ8ND82 737 aa20.72■□□□□ 0.91
USB1-209ENST00000564387 HIP1O00291 1037 aa20.71■□□□□ 0.91
USB1-209ENST00000564387 ALX1Q15699 326 aa20.71■□□□□ 0.91
USB1-209ENST00000564387 SH3D19Q5HYK7 790 aa20.71■□□□□ 0.91
USB1-209ENST00000564387 GPAT2Q6NUI2 795 aa20.71■□□□□ 0.91
USB1-209ENST00000564387 CCDC129Q6ZRS4 1044 aa20.71■□□□□ 0.91
USB1-209ENST00000564387 ANKRD23Q86SG2 305 aa20.71■□□□□ 0.91
USB1-209ENST00000564387 DYNLL2Q96FJ2 89 aa20.71■□□□□ 0.91
USB1-209ENST00000564387 CCDC136Q96JN2 1154 aa20.71■□□□□ 0.91
USB1-209ENST00000564387 GDF11O95390 407 aa20.7■□□□□ 0.9
USB1-209ENST00000564387 GH2P01242 217 aa20.7■□□□□ 0.9
USB1-209ENST00000564387 GUCY1A2P33402 732 aa20.7■□□□□ 0.9
USB1-209ENST00000564387 CDK8P49336 464 aa20.7■□□□□ 0.9
USB1-209ENST00000564387 SPP2Q13103 211 aa20.7■□□□□ 0.9
USB1-209ENST00000564387 FASTKD5Q7L8L6 764 aaKnown RBP20.7■□□□□ 0.9
USB1-209ENST00000564387 SLC44A5Q8NCS7 719 aa20.7■□□□□ 0.9
USB1-209ENST00000564387 NACAP1Q9BZK3 213 aa20.7■□□□□ 0.9
USB1-209ENST00000564387 R3HDMLQ9H3Y0 253 aa20.7■□□□□ 0.9
USB1-209ENST00000564387 AS3MTQ9HBK9 375 aa20.7■□□□□ 0.9
USB1-209ENST00000564387 TBC1D8O95759 1140 aa20.69■□□□□ 0.9
USB1-209ENST00000564387 ABCB5Q2M3G0 1257 aa20.69■□□□□ 0.9
USB1-209ENST00000564387 VPS53Q5VIR6 699 aa20.69■□□□□ 0.9
USB1-209ENST00000564387 ZNF589Q86UQ0 364 aaPredicted RBP20.69■□□□□ 0.9
USB1-209ENST00000564387 CCDC17Q96LX7 622 aa20.69■□□□□ 0.9
USB1-209ENST00000564387 SLC45A1Q9Y2W3 748 aa20.69■□□□□ 0.9
USB1-209ENST00000564387 TRIM75PA6NK02 468 aa20.68■□□□□ 0.9
USB1-209ENST00000564387 APPP05067 770 aa20.68■□□□□ 0.9
USB1-209ENST00000564387 BACE1P56817 501 aa20.68■□□□□ 0.9
USB1-209ENST00000564387 CRHR2Q13324 411 aa20.68■□□□□ 0.9
USB1-209ENST00000564387 PROCA1Q8NCQ7 364 aaPredicted RBP20.68■□□□□ 0.9
USB1-209ENST00000564387 ZMYM6O95789 1325 aa20.68■□□□□ 0.9
USB1-209ENST00000564387 CCDC171Q6TFL3 1326 aa20.68■□□□□ 0.9
USB1-209ENST00000564387 LOC285556D6RIA3 1793 aa20.67■□□□□ 0.9
USB1-209ENST00000564387 GPR25O00155 361 aa20.67■□□□□ 0.9
USB1-209ENST00000564387 TDO2P48775 406 aa20.67■□□□□ 0.9
USB1-209ENST00000564387 COL13A1Q5TAT6 717 aaPredicted RBP20.67■□□□□ 0.9
USB1-209ENST00000564387 CABP5Q9NP86 173 aa20.67■□□□□ 0.9
USB1-209ENST00000564387 C19orf81C9J6K1 198 aa20.66■□□□□ 0.9
USB1-209ENST00000564387 USP17L10C9JJH3 530 aa20.66■□□□□ 0.9
USB1-209ENST00000564387 HSPD1P10809 573 aaKnown RBP20.66■□□□□ 0.9
USB1-209ENST00000564387 MFAP1P55081 439 aaKnown RBP20.66■□□□□ 0.9
USB1-209ENST00000564387 TMEM179Q6ZVK1 233 aa20.66■□□□□ 0.9
USB1-209ENST00000564387 NAPBQ9H115 298 aa20.66■□□□□ 0.9
USB1-209ENST00000564387 DIAPH3Q9NSV4 1193 aa20.66■□□□□ 0.9
USB1-209ENST00000564387 ANAPC4Q9UJX5 808 aa20.66■□□□□ 0.9
USB1-209ENST00000564387 MYH8P13535 1937 aa20.65■□□□□ 0.9
USB1-209ENST00000564387 ADGRA2Q96PE1 1338 aa20.65■□□□□ 0.9
USB1-209ENST00000564387 MINDY4BA8MYZ0 360 aa20.65■□□□□ 0.9
USB1-209ENST00000564387 PDHXO00330 501 aa20.65■□□□□ 0.9
USB1-209ENST00000564387 TAF1CQ15572 869 aaPredicted RBP20.65■□□□□ 0.9
USB1-209ENST00000564387 CWC27Q6UX04 472 aaKnown RBP20.65■□□□□ 0.9
USB1-209ENST00000564387 ZFYVE28Q9HCC9 887 aa20.65■□□□□ 0.9
USB1-209ENST00000564387 AGTPBP1Q9UPW5 1226 aa20.65■□□□□ 0.9
USB1-209ENST00000564387 GREB1LQ9C091 1923 aaPredicted RBP20.65■□□□□ 0.9
USB1-209ENST00000564387 TLR2O60603 784 aa20.64■□□□□ 0.89
USB1-209ENST00000564387 FGAP02671 866 aa20.64■□□□□ 0.89
USB1-209ENST00000564387 AKR1B1P15121 316 aa20.64■□□□□ 0.89
USB1-209ENST00000564387 RASA1P20936 1047 aa20.64■□□□□ 0.89
USB1-209ENST00000564387 CHMLP26374 656 aa20.64■□□□□ 0.89
USB1-209ENST00000564387 PPARAQ07869 468 aa20.64■□□□□ 0.89
USB1-209ENST00000564387 SEPT2Q15019 361 aa20.64■□□□□ 0.89
USB1-209ENST00000564387 SIAH1Q8IUQ4 282 aa20.64■□□□□ 0.89
USB1-209ENST00000564387 ZNF296Q8WUU4 475 aaPredicted RBP20.64■□□□□ 0.89
USB1-209ENST00000564387 C12orf42Q96LP6 360 aa20.64■□□□□ 0.89
USB1-209ENST00000564387 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.64■□□□□ 0.89
USB1-209ENST00000564387 KIAA1683Q9H0B3 1180 aa20.64■□□□□ 0.89
USB1-209ENST00000564387 PPP4R2Q9NY27 417 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms