RNA–Protein interactions for RNA: ENST00000564342.5

NSMCE1-207, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-207ENST00000564342 BTBD19C9JJ37 291 aa9.96□□□□□ -0.82
NSMCE1-207ENST00000564342 CXCL11O14625 94 aa9.96□□□□□ -0.82
NSMCE1-207ENST00000564342 CHGBP05060 677 aa9.96□□□□□ -0.82
NSMCE1-207ENST00000564342 USP5P45974 858 aa9.96□□□□□ -0.82
NSMCE1-207ENST00000564342 HDAC1Q13547 482 aaPredicted RBP9.96□□□□□ -0.82
NSMCE1-207ENST00000564342 AAMPQ13685 434 aa9.96□□□□□ -0.82
NSMCE1-207ENST00000564342 TAF1CQ15572 869 aaPredicted RBP9.96□□□□□ -0.82
NSMCE1-207ENST00000564342 SLFNL1Q499Z3 407 aa9.96□□□□□ -0.82
NSMCE1-207ENST00000564342 TSHZ3Q63HK5 1081 aa9.96□□□□□ -0.82
NSMCE1-207ENST00000564342 CTU1Q7Z7A3 348 aaKnown RBP9.96□□□□□ -0.82
NSMCE1-207ENST00000564342 CCDC84Q86UT8 332 aaPredicted RBP9.96□□□□□ -0.82
NSMCE1-207ENST00000564342 FOXP4Q8IVH2 680 aaPredicted RBP9.96□□□□□ -0.82
NSMCE1-207ENST00000564342 RNF166Q96A37 237 aaPredicted RBP9.96□□□□□ -0.82
NSMCE1-207ENST00000564342 PICK1Q9NRD5 415 aa9.96□□□□□ -0.82
NSMCE1-207ENST00000564342 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.96□□□□□ -0.82
NSMCE1-207ENST00000564342 SAP30BPQ9UHR5 308 aaKnown RBP9.96□□□□□ -0.82
NSMCE1-207ENST00000564342 AFG3L2Q9Y4W6 797 aa9.96□□□□□ -0.82
NSMCE1-207ENST00000564342 ZHX2Q9Y6X8 837 aa9.96□□□□□ -0.82
NSMCE1-207ENST00000564342 MYH8P13535 1937 aa9.95□□□□□ -0.82
NSMCE1-207ENST00000564342 CAP2P40123 477 aa9.95□□□□□ -0.82
NSMCE1-207ENST00000564342 UBE3CQ15386 1083 aa9.95□□□□□ -0.82
NSMCE1-207ENST00000564342 SLC4A8Q2Y0W8 1093 aa9.95□□□□□ -0.82
NSMCE1-207ENST00000564342 ANKRD23Q86SG2 305 aa9.95□□□□□ -0.82
NSMCE1-207ENST00000564342 LCORLQ8N3X6 602 aa9.95□□□□□ -0.82
NSMCE1-207ENST00000564342 EXOC6Q8TAG9 804 aa9.95□□□□□ -0.82
NSMCE1-207ENST00000564342 OTUD7AQ8TE49 926 aaPredicted RBP9.95□□□□□ -0.82
NSMCE1-207ENST00000564342 GCC1Q96CN9 775 aa9.95□□□□□ -0.82
NSMCE1-207ENST00000564342 GPATCH3Q96I76 525 aa9.95□□□□□ -0.82
NSMCE1-207ENST00000564342 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.95□□□□□ -0.82
NSMCE1-207ENST00000564342 ZFYVE28Q9HCC9 887 aa9.95□□□□□ -0.82
NSMCE1-207ENST00000564342 SUPT16HQ9Y5B9 1047 aaKnown RBP9.95□□□□□ -0.82
NSMCE1-207ENST00000564342 TTC41PQ6P2S7 1318 aa9.95□□□□□ -0.82
NSMCE1-207ENST00000564342 SALL3Q9BXA9 1300 aa9.95□□□□□ -0.82
NSMCE1-207ENST00000564342 A0A0G2JLL6 359 aaPredicted RBP9.94□□□□□ -0.82
NSMCE1-207ENST00000564342 HLA-DOAP06340 250 aa9.94□□□□□ -0.82
NSMCE1-207ENST00000564342 JAG1P78504 1218 aa9.94□□□□□ -0.82
NSMCE1-207ENST00000564342 GPAT2Q6NUI2 795 aa9.94□□□□□ -0.82
NSMCE1-207ENST00000564342 PRRT2Q7Z6L0 340 aaPredicted RBP9.94□□□□□ -0.82
NSMCE1-207ENST00000564342 CRACR2BQ8N4Y2 399 aaPredicted RBP9.94□□□□□ -0.82
NSMCE1-207ENST00000564342 KBTBD3Q8NAB2 608 aa9.94□□□□□ -0.82
NSMCE1-207ENST00000564342 PI4K2BQ8TCG2 481 aa9.94□□□□□ -0.82
NSMCE1-207ENST00000564342 SDR42E1Q8WUS8 393 aa9.94□□□□□ -0.82
NSMCE1-207ENST00000564342 CRNKL1Q9BZJ0 848 aaKnown RBP9.94□□□□□ -0.82
NSMCE1-207ENST00000564342 EHD4Q9H223 541 aa9.94□□□□□ -0.82
NSMCE1-207ENST00000564342 ARMT1Q9H993 441 aa9.94□□□□□ -0.82
NSMCE1-207ENST00000564342 MGAMO43451 1857 aa9.93□□□□□ -0.82
NSMCE1-207ENST00000564342 ADGRA2Q96PE1 1338 aa9.93□□□□□ -0.82
NSMCE1-207ENST00000564342 TRIM75PA6NK02 468 aa9.93□□□□□ -0.82
NSMCE1-207ENST00000564342 PDHXO00330 501 aa9.93□□□□□ -0.82
NSMCE1-207ENST00000564342 TLR2O60603 784 aa9.93□□□□□ -0.82
NSMCE1-207ENST00000564342 MBD4O95243 580 aa9.93□□□□□ -0.82
NSMCE1-207ENST00000564342 CAP1Q01518 475 aa9.93□□□□□ -0.82
NSMCE1-207ENST00000564342 SP3Q02447 781 aa9.93□□□□□ -0.82
NSMCE1-207ENST00000564342 SHROOM1Q2M3G4 852 aaPredicted RBP9.93□□□□□ -0.82
NSMCE1-207ENST00000564342 ANKRD45Q5TZF3 282 aa9.93□□□□□ -0.82
NSMCE1-207ENST00000564342 ZSCAN25Q6NSZ9 544 aa9.93□□□□□ -0.82
NSMCE1-207ENST00000564342 TATDN1Q6P1N9 297 aa9.93□□□□□ -0.82
NSMCE1-207ENST00000564342 TTC6Q86TZ1 520 aa9.93□□□□□ -0.82
NSMCE1-207ENST00000564342 CD99L2Q8TCZ2 262 aa9.93□□□□□ -0.82
NSMCE1-207ENST00000564342 ERO1AQ96HE7 468 aa9.93□□□□□ -0.82
NSMCE1-207ENST00000564342 TBC1D2Q9BYX2 928 aa9.93□□□□□ -0.82
NSMCE1-207ENST00000564342 DCP1AQ9NPI6 582 aaPredicted RBP9.93□□□□□ -0.82
NSMCE1-207ENST00000564342 SERPINB13Q9UIV8 391 aa9.93□□□□□ -0.82
NSMCE1-207ENST00000564342 PCDHB13Q9Y5F0 798 aa9.93□□□□□ -0.82
NSMCE1-207ENST00000564342 POTEB3A0JP26 581 aa9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 USP17L5A8MUK1 530 aa9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 PRKAB2O43741 272 aa9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 GLRX3O76003 335 aaKnown RBP9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 GDF11O95390 407 aa9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 ASNSP08243 561 aa9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 MX1P20591 662 aa9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 PLCD1P51178 756 aa9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 IRX5P78411 483 aaPredicted RBP9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 GABPAQ06546 454 aa9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 SPP2Q13103 211 aa9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 PKN2Q16513 984 aaKnown RBP9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 FBXO46Q6PJ61 603 aaPredicted RBP9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 POTEBQ6S5H4 581 aa9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 C17orf99Q6UX52 265 aa9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 GADL1Q6ZQY3 521 aa9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 FASTKD5Q7L8L6 764 aaKnown RBP9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 OTOP1Q7RTM1 612 aa9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 SMC5Q8IY18 1101 aa9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 ZNF280CQ8ND82 737 aa9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 WDR18Q9BV38 432 aa9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 TRIM34Q9BYJ4 488 aa9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 PUS7LQ9H0K6 701 aaKnown RBP9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 GINM1Q9NU53 330 aa9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 MCM9Q9NXL9 1143 aa9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 ZBTB21Q9ULJ3 1066 aa9.92□□□□□ -0.82
NSMCE1-207ENST00000564342 CCDC85CA6NKD9 419 aa9.91□□□□□ -0.82
NSMCE1-207ENST00000564342 ERC2O15083 957 aa9.91□□□□□ -0.82
NSMCE1-207ENST00000564342 IGHDP01880 384 aa9.91□□□□□ -0.82
NSMCE1-207ENST00000564342 POLR3DP05423 398 aaPredicted RBP9.91□□□□□ -0.82
NSMCE1-207ENST00000564342 CYP2C8P10632 490 aa9.91□□□□□ -0.82
NSMCE1-207ENST00000564342 CYP2D6P10635 497 aa9.91□□□□□ -0.82
NSMCE1-207ENST00000564342 SHMT1P34896 483 aa9.91□□□□□ -0.82
NSMCE1-207ENST00000564342 SH3D19Q5HYK7 790 aa9.91□□□□□ -0.82
NSMCE1-207ENST00000564342 PROCA1Q8NCQ7 364 aaPredicted RBP9.91□□□□□ -0.82
NSMCE1-207ENST00000564342 APPBP2Q92624 585 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms