RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 ASCC2Q9H1I8 757 aaPredicted RBP20.38■□□□□ 0.85
CCNF-203ENST00000564236 ZBTB21Q9ULJ3 1066 aa20.38■□□□□ 0.85
CCNF-203ENST00000564236 CDK5RAP2Q96SN8 1893 aa20.38■□□□□ 0.85
CCNF-203ENST00000564236 ATAD5Q96QE3 1844 aa20.38■□□□□ 0.85
CCNF-203ENST00000564236 MGAMO43451 1857 aa20.37■□□□□ 0.85
CCNF-203ENST00000564236 ADCY3O60266 1144 aa20.37■□□□□ 0.85
CCNF-203ENST00000564236 HMMRO75330 724 aa20.37■□□□□ 0.85
CCNF-203ENST00000564236 ECM2O94769 699 aaPredicted RBP20.37■□□□□ 0.85
CCNF-203ENST00000564236 MTMR2Q13614 643 aa20.37■□□□□ 0.85
CCNF-203ENST00000564236 TTF1Q15361 905 aaPredicted RBP20.37■□□□□ 0.85
CCNF-203ENST00000564236 CHMP4BQ9H444 224 aaKnown RBP20.37■□□□□ 0.85
CCNF-203ENST00000564236 RAB11FIP3O75154 756 aa20.36■□□□□ 0.85
CCNF-203ENST00000564236 MYCP01106 439 aaPredicted RBP20.36■□□□□ 0.85
CCNF-203ENST00000564236 CLASRPQ8N2M8 674 aaKnown RBP20.36■□□□□ 0.85
CCNF-203ENST00000564236 MIGA1Q8NAN2 632 aa20.36■□□□□ 0.85
CCNF-203ENST00000564236 COA7Q96BR5 231 aa20.36■□□□□ 0.85
CCNF-203ENST00000564236 IL1RAPL2Q9NP60 686 aa20.36■□□□□ 0.85
CCNF-203ENST00000564236 NDUFB9Q9Y6M9 179 aa20.36■□□□□ 0.85
CCNF-203ENST00000564236 MYO5AQ9Y4I1 1855 aaKnown RBP20.36■□□□□ 0.85
CCNF-203ENST00000564236 USP17L10C9JJH3 530 aa20.35■□□□□ 0.85
CCNF-203ENST00000564236 TRIM34Q9BYJ4 488 aa20.35■□□□□ 0.85
CCNF-203ENST00000564236 RNF208Q9H0X6 261 aa20.35■□□□□ 0.85
CCNF-203ENST00000564236 TMOD4Q9NZQ9 345 aa20.35■□□□□ 0.85
CCNF-203ENST00000564236 SAP30BPQ9UHR5 308 aaKnown RBP20.35■□□□□ 0.85
CCNF-203ENST00000564236 SERPINB13Q9UIV8 391 aa20.35■□□□□ 0.85
CCNF-203ENST00000564236 COG6Q9Y2V7 657 aa20.35■□□□□ 0.85
CCNF-203ENST00000564236 SHROOM1Q2M3G4 852 aaPredicted RBP20.34■□□□□ 0.85
CCNF-203ENST00000564236 TTC6Q86TZ1 520 aa20.34■□□□□ 0.85
CCNF-203ENST00000564236 C12orf42Q96LP6 360 aa20.34■□□□□ 0.85
CCNF-203ENST00000564236 PCDH10Q9P2E7 1040 aa20.34■□□□□ 0.85
CCNF-203ENST00000564236 RCAN3Q9UKA8 241 aa20.34■□□□□ 0.85
CCNF-203ENST00000564236 GJD2Q9UKL4 321 aa20.34■□□□□ 0.85
CCNF-203ENST00000564236 DDX60LQ5H9U9 1706 aaKnown RBP20.33■□□□□ 0.85
CCNF-203ENST00000564236 GDF11O95390 407 aa20.33■□□□□ 0.85
CCNF-203ENST00000564236 INHAP05111 366 aa20.33■□□□□ 0.85
CCNF-203ENST00000564236 USP5P45974 858 aa20.33■□□□□ 0.85
CCNF-203ENST00000564236 U2AF1L4Q8WU68 220 aaKnown RBP20.33■□□□□ 0.85
CCNF-203ENST00000564236 PAK6Q9NQU5 681 aaPredicted RBP20.33■□□□□ 0.85
CCNF-203ENST00000564236 TAOK2Q9UL54 1235 aa20.33■□□□□ 0.85
CCNF-203ENST00000564236 TCRBV5S4A2TA0A5A2 114 aa20.32■□□□□ 0.84
CCNF-203ENST00000564236 SGPL1O95470 568 aa20.32■□□□□ 0.84
CCNF-203ENST00000564236 ELNP15502 786 aa20.32■□□□□ 0.84
CCNF-203ENST00000564236 PDE6AP16499 860 aa20.32■□□□□ 0.84
CCNF-203ENST00000564236 GABPAQ06546 454 aa20.32■□□□□ 0.84
CCNF-203ENST00000564236 PDE3AQ14432 1141 aa20.32■□□□□ 0.84
CCNF-203ENST00000564236 HABP4Q5JVS0 413 aaKnown RBP20.32■□□□□ 0.84
CCNF-203ENST00000564236 GTF3C2Q8WUA4 911 aaPredicted RBP20.32■□□□□ 0.84
CCNF-203ENST00000564236 UNC93B1Q9H1C4 597 aa20.32■□□□□ 0.84
CCNF-203ENST00000564236 EMILIN3Q9NT22 766 aa20.32■□□□□ 0.84
CCNF-203ENST00000564236 BIN2Q9UBW5 565 aaPredicted RBP20.32■□□□□ 0.84
CCNF-203ENST00000564236 GH2P01242 217 aa20.31■□□□□ 0.84
CCNF-203ENST00000564236 IFIT2P09913 472 aaKnown RBP20.31■□□□□ 0.84
CCNF-203ENST00000564236 HERVK_113P62684 666 aa20.31■□□□□ 0.84
CCNF-203ENST00000564236 IRX3P78415 501 aaPredicted RBP20.31■□□□□ 0.84
CCNF-203ENST00000564236 SLC9C2Q5TAH2 1124 aa20.31■□□□□ 0.84
CCNF-203ENST00000564236 USP17L2Q6R6M4 530 aa20.31■□□□□ 0.84
CCNF-203ENST00000564236 P2RX7Q99572 595 aaKnown RBP20.31■□□□□ 0.84
CCNF-203ENST00000564236 MAGEB6P1A0A0J9YX57 407 aa20.3■□□□□ 0.84
CCNF-203ENST00000564236 KIAA1683Q9H0B3 1180 aa20.3■□□□□ 0.84
CCNF-203ENST00000564236 CRISPLD2Q9H0B8 497 aa20.3■□□□□ 0.84
CCNF-203ENST00000564236 TXNRD2Q9NNW7 524 aa20.3■□□□□ 0.84
CCNF-203ENST00000564236 ATP5JP18859 108 aa20.29■□□□□ 0.84
CCNF-203ENST00000564236 SHMT1P34896 483 aa20.29■□□□□ 0.84
CCNF-203ENST00000564236 PLCD1P51178 756 aa20.29■□□□□ 0.84
CCNF-203ENST00000564236 POTEEQ6S8J3 1075 aa20.29■□□□□ 0.84
CCNF-203ENST00000564236 CRNKL1Q9BZJ0 848 aaKnown RBP20.29■□□□□ 0.84
CCNF-203ENST00000564236 RBPJLQ9UBG7 517 aa20.29■□□□□ 0.84
CCNF-203ENST00000564236 ZNF532Q9HCE3 1301 aa20.28■□□□□ 0.84
CCNF-203ENST00000564236 GOLIM4O00461 696 aa20.28■□□□□ 0.84
CCNF-203ENST00000564236 HMGCRP04035 888 aa20.28■□□□□ 0.84
CCNF-203ENST00000564236 XRCC5P13010 732 aaKnown RBP20.28■□□□□ 0.84
CCNF-203ENST00000564236 USP14P54578 494 aa20.28■□□□□ 0.84
CCNF-203ENST00000564236 CERKLQ49MI3 558 aaPredicted RBP20.28■□□□□ 0.84
CCNF-203ENST00000564236 GPRC5AQ8NFJ5 357 aa20.28■□□□□ 0.84
CCNF-203ENST00000564236 ABCB5Q2M3G0 1257 aa20.27■□□□□ 0.84
CCNF-203ENST00000564236 LBX2Q6XYB7 198 aa20.27■□□□□ 0.84
CCNF-203ENST00000564236 SOCS4Q8WXH5 440 aa20.27■□□□□ 0.84
CCNF-203ENST00000564236 HAUS7Q99871 368 aa20.27■□□□□ 0.84
CCNF-203ENST00000564236 HTATIP2Q9BUP3 242 aa20.27■□□□□ 0.84
CCNF-203ENST00000564236 DCP1AQ9NPI6 582 aaPredicted RBP20.27■□□□□ 0.84
CCNF-203ENST00000564236 MYH1P12882 1939 aa20.27■□□□□ 0.84
CCNF-203ENST00000564236 FARP2O94887 1054 aaPredicted RBP20.26■□□□□ 0.83
CCNF-203ENST00000564236 MAPK4P31152 587 aa20.26■□□□□ 0.83
CCNF-203ENST00000564236 GUCY1A2P33402 732 aa20.26■□□□□ 0.83
CCNF-203ENST00000564236 ADD2P35612 726 aa20.26■□□□□ 0.83
CCNF-203ENST00000564236 ERVK-9P63128 1117 aa20.26■□□□□ 0.83
CCNF-203ENST00000564236 ERVK-24P63145 666 aa20.26■□□□□ 0.83
CCNF-203ENST00000564236 USP6NLQ92738 828 aa20.26■□□□□ 0.83
CCNF-203ENST00000564236 DNAJC2Q99543 621 aaKnown RBP20.26■□□□□ 0.83
CCNF-203ENST00000564236 PAG1Q9NWQ8 432 aa20.26■□□□□ 0.83
CCNF-203ENST00000564236 USP17L15C9J2P7 530 aa20.25■□□□□ 0.83
CCNF-203ENST00000564236 USP17L13C9JLJ4 530 aa20.25■□□□□ 0.83
CCNF-203ENST00000564236 USP17L11C9JVI0 530 aa20.25■□□□□ 0.83
CCNF-203ENST00000564236 USP17L18D6R9N7 530 aa20.25■□□□□ 0.83
CCNF-203ENST00000564236 USP17L22D6RA61 530 aa20.25■□□□□ 0.83
CCNF-203ENST00000564236 USP17L17D6RBQ6 530 aa20.25■□□□□ 0.83
CCNF-203ENST00000564236 USP17L19D6RCP7 530 aa20.25■□□□□ 0.83
CCNF-203ENST00000564236 USP17L20D6RJB6 530 aa20.25■□□□□ 0.83
CCNF-203ENST00000564236 H0YGN5 161 aa20.25■□□□□ 0.83
CCNF-203ENST00000564236 USP17L24Q0WX57 530 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms