RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 GYS2P54840 703 aa12.67□□□□□ -0.38
TCF4-222ENST00000564228 MAP3K9P80192 1104 aa12.67□□□□□ -0.38
TCF4-222ENST00000564228 UBE4AQ14139 1066 aa12.67□□□□□ -0.38
TCF4-222ENST00000564228 SCARF1Q14162 830 aa12.67□□□□□ -0.38
TCF4-222ENST00000564228 SWT1Q5T5J6 900 aaKnown RBP12.67□□□□□ -0.38
TCF4-222ENST00000564228 PI16Q6UXB8 463 aa12.67□□□□□ -0.38
TCF4-222ENST00000564228 ILDR2Q71H61 639 aa12.67□□□□□ -0.38
TCF4-222ENST00000564228 TMX1Q9H3N1 280 aa12.67□□□□□ -0.38
TCF4-222ENST00000564228 KIF13BQ9NQT8 1826 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 DLEC1Q9Y238 1755 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 SLC27A2O14975 620 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 BCAMP50895 628 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 CORO7P57737 925 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 TSGA10IPQ3SY00 556 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 NAA16Q6N069 864 aaPredicted RBP12.66□□□□□ -0.38
TCF4-222ENST00000564228 GOLGA1Q92805 767 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 MTFR1LQ9H019 292 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 DEF6Q9H4E7 631 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 PAG1Q9NWQ8 432 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 HMG20BQ9P0W2 317 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 C10orf71Q711Q0 1435 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 ZNF804BA4D1E1 1349 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 XDHP47989 1333 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 POTEB2H3BUK9 544 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 KLRK1P26718 216 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 POLD1P28340 1107 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 ALDH1B1P30837 517 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 ADD1P35611 737 aaKnown RBP12.66□□□□□ -0.38
TCF4-222ENST00000564228 MCAMP43121 646 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 GYG1P46976 350 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 TUBB4BP68371 445 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 TOB2Q14106 344 aaPredicted RBP12.66□□□□□ -0.38
TCF4-222ENST00000564228 PACS2Q86VP3 889 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 CCDC34Q96HJ3 373 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 GOLPH3LQ9H4A5 285 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 IFNKQ9P0W0 207 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 MRFAP1Q9Y605 127 aa12.66□□□□□ -0.38
TCF4-222ENST00000564228 H3BQF6 201 aa12.65□□□□□ -0.38
TCF4-222ENST00000564228 EIF3JO75822 258 aaKnown RBP12.65□□□□□ -0.38
TCF4-222ENST00000564228 ZAP70P43403 619 aa12.65□□□□□ -0.38
TCF4-222ENST00000564228 GPSM2P81274 684 aa12.65□□□□□ -0.38
TCF4-222ENST00000564228 PPP2R3AQ06190 1150 aa12.65□□□□□ -0.38
TCF4-222ENST00000564228 LONRF2Q1L5Z9 754 aa12.65□□□□□ -0.38
TCF4-222ENST00000564228 CAVIN4Q5BKX8 364 aa12.65□□□□□ -0.38
TCF4-222ENST00000564228 VPS37DQ86XT2 251 aa12.65□□□□□ -0.38
TCF4-222ENST00000564228 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.65□□□□□ -0.38
TCF4-222ENST00000564228 BRF1Q92994 677 aa12.65□□□□□ -0.38
TCF4-222ENST00000564228 ZBTB9Q96C00 473 aa12.65□□□□□ -0.38
TCF4-222ENST00000564228 ZNF396Q96N95 335 aaPredicted RBP12.65□□□□□ -0.38
TCF4-222ENST00000564228 PARD6BQ9BYG5 372 aa12.65□□□□□ -0.38
TCF4-222ENST00000564228 IQSEC3Q9UPP2 1182 aaPredicted RBP12.65□□□□□ -0.38
TCF4-222ENST00000564228 EIF3CLB5ME19 914 aaKnown RBP12.64□□□□□ -0.39
TCF4-222ENST00000564228 H3BQV1 296 aa12.64□□□□□ -0.39
TCF4-222ENST00000564228 MYO1BO43795 1136 aa12.64□□□□□ -0.39
TCF4-222ENST00000564228 UQCRFS1P1P0C7P4 283 aa12.64□□□□□ -0.39
TCF4-222ENST00000564228 ARID4AP29374 1257 aaPredicted RBP12.64□□□□□ -0.39
TCF4-222ENST00000564228 TXLNAP40222 546 aa12.64□□□□□ -0.39
TCF4-222ENST00000564228 USP5P45974 858 aa12.64□□□□□ -0.39
TCF4-222ENST00000564228 APOBRQ0VD83 1088 aa12.64□□□□□ -0.39
TCF4-222ENST00000564228 IFFO2Q5TF58 517 aa12.64□□□□□ -0.39
TCF4-222ENST00000564228 OLFM4Q6UX06 510 aa12.64□□□□□ -0.39
TCF4-222ENST00000564228 EIF3CQ99613 913 aaKnown RBP12.64□□□□□ -0.39
TCF4-222ENST00000564228 LLPHQ9BRT6 129 aaKnown RBP12.64□□□□□ -0.39
TCF4-222ENST00000564228 LTBP1Q14766 1721 aa12.64□□□□□ -0.39
TCF4-222ENST00000564228 GOLGB1Q14789 3259 aaKnown RBP12.64□□□□□ -0.39
TCF4-222ENST00000564228 LOC102724159A0A0B4J2E5 919 aa12.64□□□□□ -0.39
TCF4-222ENST00000564228 DCAF8L1A6NGE4 600 aa12.64□□□□□ -0.39
TCF4-222ENST00000564228 IKBKBO14920 756 aa12.64□□□□□ -0.39
TCF4-222ENST00000564228 FANCGO15287 622 aa12.64□□□□□ -0.39
TCF4-222ENST00000564228 CBFA2T2O43439 604 aa12.64□□□□□ -0.39
TCF4-222ENST00000564228 DTNBO60941 627 aa12.64□□□□□ -0.39
TCF4-222ENST00000564228 UFL1O94874 794 aa12.64□□□□□ -0.39
TCF4-222ENST00000564228 RASGRF1Q13972 1273 aa12.64□□□□□ -0.39
TCF4-222ENST00000564228 PWP2Q15269 919 aaKnown RBP12.64□□□□□ -0.39
TCF4-222ENST00000564228 STYK1Q6J9G0 422 aa12.64□□□□□ -0.39
TCF4-222ENST00000564228 TMC4Q7Z404 712 aa12.64□□□□□ -0.39
TCF4-222ENST00000564228 CCDC91Q7Z6B0 441 aa12.64□□□□□ -0.39
TCF4-222ENST00000564228 EFCAB13Q8IY85 973 aa12.64□□□□□ -0.39
TCF4-222ENST00000564228 ZNF512BQ96KM6 892 aaPredicted RBP12.64□□□□□ -0.39
TCF4-222ENST00000564228 GPR101Q96P66 508 aaPredicted RBP12.64□□□□□ -0.39
TCF4-222ENST00000564228 A0A1W2PQ27 194 aa12.63□□□□□ -0.39
TCF4-222ENST00000564228 A0A1W2PQ64 194 aa12.63□□□□□ -0.39
TCF4-222ENST00000564228 A0A1W2PQD8 194 aa12.63□□□□□ -0.39
TCF4-222ENST00000564228 ARHGAP6O43182 974 aa12.63□□□□□ -0.39
TCF4-222ENST00000564228 KRT32Q14532 448 aa12.63□□□□□ -0.39
TCF4-222ENST00000564228 HDXQ7Z353 690 aa12.63□□□□□ -0.39
TCF4-222ENST00000564228 TXNRD3Q86VQ6 643 aa12.63□□□□□ -0.39
TCF4-222ENST00000564228 SP8Q8IXZ3 490 aa12.63□□□□□ -0.39
TCF4-222ENST00000564228 FMR1NBQ8N0W7 255 aaPredicted RBP12.63□□□□□ -0.39
TCF4-222ENST00000564228 FSIP1Q8NA03 581 aa12.63□□□□□ -0.39
TCF4-222ENST00000564228 KBTBD3Q8NAB2 608 aa12.63□□□□□ -0.39
TCF4-222ENST00000564228 SMARCC2Q8TAQ2 1214 aa12.63□□□□□ -0.39
TCF4-222ENST00000564228 FAM84BQ96KN1 310 aaPredicted RBP12.63□□□□□ -0.39
TCF4-222ENST00000564228 CEP89Q96ST8 783 aa12.63□□□□□ -0.39
TCF4-222ENST00000564228 FAM107BQ9H098 131 aa12.63□□□□□ -0.39
TCF4-222ENST00000564228 TMX4Q9H1E5 349 aaPredicted RBP12.63□□□□□ -0.39
TCF4-222ENST00000564228 PPP1R1BQ9UD71 204 aaPredicted RBP12.63□□□□□ -0.39
TCF4-222ENST00000564228 GGA1Q9UJY5 639 aa12.63□□□□□ -0.39
TCF4-222ENST00000564228 LEMD3Q9Y2U8 911 aa12.63□□□□□ -0.39
TCF4-222ENST00000564228 ATP6V0A2Q9Y487 856 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms