RNA–Protein interactions for RNA: ENST00000563964.5

LAT-208, Transcript of linker for activation of T cells, human

TSL 5

Gene LAT, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAT-208	ENST00000563964	BRCA2	P51587	3418 aa		28.4	■■■□□ 2.14
LAT-208	ENST00000563964	ATP5J	P18859	108 aa		28.4	■■■□□ 2.14
LAT-208	ENST00000563964	MTMR2	Q13614	643 aa		28.4	■■■□□ 2.14
LAT-208	ENST00000563964	RAET1E	Q8TD07	263 aa		28.4	■■■□□ 2.14
LAT-208	ENST00000563964	LRRCC1	Q9C099	1032 aa		28.4	■■■□□ 2.14
LAT-208	ENST00000563964	ZBTB21	Q9ULJ3	1066 aa		28.4	■■■□□ 2.14
LAT-208	ENST00000563964	PDE4DIP	Q5VU43	2346 aa		28.4	■■■□□ 2.14
LAT-208	ENST00000563964	SMARCA5	O60264	1052 aa	Predicted RBP	28.39	■■■□□ 2.14
LAT-208	ENST00000563964	BACE1	P56817	501 aa		28.39	■■■□□ 2.14
LAT-208	ENST00000563964	TTC6	Q86TZ1	520 aa		28.39	■■■□□ 2.14
LAT-208	ENST00000563964	ANKRD13C	Q8N6S4	541 aa		28.39	■■■□□ 2.14
LAT-208	ENST00000563964	EHD4	Q9H223	541 aa		28.39	■■■□□ 2.14
LAT-208	ENST00000563964	PAG1	Q9NWQ8	432 aa		28.39	■■■□□ 2.14
LAT-208	ENST00000563964	KIAA0100	Q14667	2235 aa	Known RBP	28.39	■■■□□ 2.14
LAT-208	ENST00000563964	TCRBV5S4A2T	A0A5A2	114 aa		28.38	■■■□□ 2.13
LAT-208	ENST00000563964	PRKCZ	Q05513	592 aa		28.38	■■■□□ 2.13
LAT-208	ENST00000563964	PABPC4	Q13310	644 aa	Known RBP eCLIP	28.38	■■■□□ 2.13
LAT-208	ENST00000563964	TATDN1	Q6P1N9	297 aa		28.38	■■■□□ 2.13
LAT-208	ENST00000563964	SERPINB13	Q9UIV8	391 aa		28.38	■■■□□ 2.13
LAT-208	ENST00000563964	HAUS7	Q99871	368 aa		28.37	■■■□□ 2.13
LAT-208	ENST00000563964	CRNKL1	Q9BZJ0	848 aa	Known RBP	28.37	■■■□□ 2.13
LAT-208	ENST00000563964	ASCC2	Q9H1I8	757 aa	Predicted RBP	28.37	■■■□□ 2.13
LAT-208	ENST00000563964	GABRQ	Q9UN88	632 aa		28.37	■■■□□ 2.13
LAT-208	ENST00000563964	GRK4	P32298	578 aa		28.36	■■■□□ 2.13
LAT-208	ENST00000563964	TMOD4	Q9NZQ9	345 aa		28.36	■■■□□ 2.13
LAT-208	ENST00000563964	C19orf81	C9J6K1	198 aa		28.35	■■■□□ 2.13
LAT-208	ENST00000563964	USP17L10	C9JJH3	530 aa		28.35	■■■□□ 2.13
LAT-208	ENST00000563964	GH2	P01242	217 aa		28.35	■■■□□ 2.13
LAT-208	ENST00000563964	PLCD1	P51178	756 aa		28.35	■■■□□ 2.13
LAT-208	ENST00000563964	MKI67	P46013	3256 aa	Known RBP	28.35	■■■□□ 2.13
LAT-208	ENST00000563964	DDX60L	Q5H9U9	1706 aa	Known RBP	28.35	■■■□□ 2.13
LAT-208	ENST00000563964	TNPO2	O14787	897 aa	Known RBP	28.34	■■■□□ 2.13
LAT-208	ENST00000563964	POLR3D	P05423	398 aa	Predicted RBP	28.34	■■■□□ 2.13
LAT-208	ENST00000563964	GCLC	P48506	637 aa	Predicted RBP	28.34	■■■□□ 2.13
LAT-208	ENST00000563964	FAM110C	Q1W6H9	321 aa		28.34	■■■□□ 2.13
LAT-208	ENST00000563964	LCORL	Q8N3X6	602 aa		28.34	■■■□□ 2.13
LAT-208	ENST00000563964	NAV1	Q8NEY1	1877 aa		28.34	■■■□□ 2.13
LAT-208	ENST00000563964	ADD2	P35612	726 aa		28.33	■■■□□ 2.13
LAT-208	ENST00000563964	SLFNL1	Q499Z3	407 aa		28.33	■■■□□ 2.13
LAT-208	ENST00000563964	DCTPP1	Q9H773	170 aa		28.33	■■■□□ 2.13
LAT-208	ENST00000563964	MCM9	Q9NXL9	1143 aa		28.33	■■■□□ 2.13
LAT-208	ENST00000563964	HOXA7	P31268	230 aa	Predicted RBP	28.32	■■■□□ 2.12
LAT-208	ENST00000563964	FLT3LG	P49771	235 aa		28.32	■■■□□ 2.12
LAT-208	ENST00000563964	MTFR1	Q15390	333 aa		28.32	■■■□□ 2.12
LAT-208	ENST00000563964	CERKL	Q49MI3	558 aa	Predicted RBP	28.32	■■■□□ 2.12
LAT-208	ENST00000563964	SDR42E1	Q8WUS8	393 aa		28.32	■■■□□ 2.12
LAT-208	ENST00000563964	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	28.32	■■■□□ 2.12
LAT-208	ENST00000563964	ARMT1	Q9H993	441 aa		28.32	■■■□□ 2.12
LAT-208	ENST00000563964	SHMT1	P34896	483 aa		28.31	■■■□□ 2.12
LAT-208	ENST00000563964	IRX3	P78415	501 aa	Predicted RBP	28.31	■■■□□ 2.12
LAT-208	ENST00000563964	PRPF38B	Q5VTL8	546 aa	Known RBP	28.31	■■■□□ 2.12
LAT-208	ENST00000563964	DCP1A	Q9NPI6	582 aa	Predicted RBP	28.31	■■■□□ 2.12
LAT-208	ENST00000563964	EMILIN3	Q9NT22	766 aa		28.31	■■■□□ 2.12
LAT-208	ENST00000563964	BIN2	Q9UBW5	565 aa	Predicted RBP	28.31	■■■□□ 2.12
LAT-208	ENST00000563964	EVX2	Q03828	476 aa		28.3	■■■□□ 2.12
LAT-208	ENST00000563964	ABCB5	Q2M3G0	1257 aa		28.3	■■■□□ 2.12
LAT-208	ENST00000563964	P2RX7	Q99572	595 aa	Known RBP	28.3	■■■□□ 2.12
LAT-208	ENST00000563964	MBD4	O95243	580 aa		28.29	■■■□□ 2.12
LAT-208	ENST00000563964	CHGB	P05060	677 aa		28.29	■■■□□ 2.12
LAT-208	ENST00000563964	GABPA	Q06546	454 aa		28.29	■■■□□ 2.12
LAT-208	ENST00000563964	RAB3GAP1	Q15042	981 aa		28.29	■■■□□ 2.12
LAT-208	ENST00000563964	USP17L2	Q6R6M4	530 aa		28.29	■■■□□ 2.12
LAT-208	ENST00000563964	SLAIN1	Q8ND83	568 aa		28.29	■■■□□ 2.12
LAT-208	ENST00000563964	COA7	Q96BR5	231 aa		28.29	■■■□□ 2.12
LAT-208	ENST00000563964	PRKAB2	O43741	272 aa		28.28	■■■□□ 2.12
LAT-208	ENST00000563964	ADCY3	O60266	1144 aa		28.28	■■■□□ 2.12
LAT-208	ENST00000563964	CABP5	Q9NP86	173 aa		28.28	■■■□□ 2.12
LAT-208	ENST00000563964	ECHDC1	Q9NTX5	307 aa		28.28	■■■□□ 2.12
LAT-208	ENST00000563964	UBXN2A	P68543	259 aa		28.27	■■■□□ 2.12
LAT-208	ENST00000563964	IRF5	Q13568	498 aa		28.27	■■■□□ 2.12
LAT-208	ENST00000563964	UBE3C	Q15386	1083 aa		28.27	■■■□□ 2.12
LAT-208	ENST00000563964	FEZ1	Q99689	392 aa		28.27	■■■□□ 2.12
LAT-208	ENST00000563964	MORF4L1	Q9UBU8	362 aa		28.27	■■■□□ 2.12
LAT-208	ENST00000563964	MYH7	P12883	1935 aa		28.27	■■■□□ 2.12
LAT-208	ENST00000563964	DOCK3	Q8IZD9	2030 aa		28.26	■■■□□ 2.12
LAT-208	ENST00000563964	CYP2D6	P10635	497 aa		28.26	■■■□□ 2.11
LAT-208	ENST00000563964	CCL5	P13501	91 aa		28.26	■■■□□ 2.11
LAT-208	ENST00000563964	ELN	P15502	786 aa		28.26	■■■□□ 2.11
LAT-208	ENST00000563964	HERVK_113	P62684	666 aa		28.26	■■■□□ 2.11
LAT-208	ENST00000563964	ZYX	Q15942	572 aa	Known RBP	28.26	■■■□□ 2.11
LAT-208	ENST00000563964	PXYLP1	Q8TE99	480 aa		28.26	■■■□□ 2.11
LAT-208	ENST00000563964	ATP8A2	Q9NTI2	1148 aa		28.26	■■■□□ 2.11
LAT-208	ENST00000563964	PCDHB15	Q9Y5E8	787 aa		28.26	■■■□□ 2.11
LAT-208	ENST00000563964	RRP1	P56182	461 aa	Known RBP	28.25	■■■□□ 2.11
LAT-208	ENST00000563964	ZSCAN25	Q6NSZ9	544 aa		28.25	■■■□□ 2.11
LAT-208	ENST00000563964	TAOK2	Q9UL54	1235 aa		28.25	■■■□□ 2.11
LAT-208	ENST00000563964	PEX10	O60683	326 aa		28.24	■■■□□ 2.11
LAT-208	ENST00000563964	GUCY1A2	P33402	732 aa		28.24	■■■□□ 2.11
LAT-208	ENST00000563964	ACER1	Q8TDN7	264 aa		28.24	■■■□□ 2.11
LAT-208	ENST00000563964	C12orf42	Q96LP6	360 aa		28.24	■■■□□ 2.11
LAT-208	ENST00000563964	KIAA1683	Q9H0B3	1180 aa		28.24	■■■□□ 2.11
LAT-208	ENST00000563964	RNF208	Q9H0X6	261 aa		28.24	■■■□□ 2.11
LAT-208	ENST00000563964	SEPT2	Q15019	361 aa		28.23	■■■□□ 2.11
LAT-208	ENST00000563964	TSHZ3	Q63HK5	1081 aa		28.23	■■■□□ 2.11
LAT-208	ENST00000563964	GPATCH3	Q96I76	525 aa		28.23	■■■□□ 2.11
LAT-208	ENST00000563964	TXNRD2	Q9NNW7	524 aa		28.23	■■■□□ 2.11
LAT-208	ENST00000563964	RBPJL	Q9UBG7	517 aa		28.23	■■■□□ 2.11
LAT-208	ENST00000563964	GJB1	P08034	283 aa		28.22	■■■□□ 2.11
LAT-208	ENST00000563964	USP14	P54578	494 aa		28.22	■■■□□ 2.11
LAT-208	ENST00000563964	SLC44A5	Q8NCS7	719 aa		28.22	■■■□□ 2.11

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms