RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 MB21D2Q8IYB1 491 aaPredicted RBP31.93■■■□□ 2.7
SH3GL3-205ENST00000563901 TCEANC2Q96MN5 208 aa31.93■■■□□ 2.7
SH3GL3-205ENST00000563901 ZNF341Q9BYN7 854 aa31.93■■■□□ 2.7
SH3GL3-205ENST00000563901 UPF3BQ9BZI7 483 aaKnown RBP31.93■■■□□ 2.7
SH3GL3-205ENST00000563901 CERKLQ49MI3 558 aaPredicted RBP31.92■■■□□ 2.7
SH3GL3-205ENST00000563901 ZNF444Q8N0Y2 327 aaPredicted RBP31.92■■■□□ 2.7
SH3GL3-205ENST00000563901 HOOK2Q96ED9 719 aa31.92■■■□□ 2.7
SH3GL3-205ENST00000563901 KRT23Q9C075 422 aa31.92■■■□□ 2.7
SH3GL3-205ENST00000563901 CNNM2Q9H8M5 875 aa31.92■■■□□ 2.7
SH3GL3-205ENST00000563901 ZNF287Q9HBT7 754 aa31.92■■■□□ 2.7
SH3GL3-205ENST00000563901 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.92■■■□□ 2.7
SH3GL3-205ENST00000563901 USP2O75604 605 aaPredicted RBP31.91■■■□□ 2.7
SH3GL3-205ENST00000563901 PCP11498 1178 aaKnown RBP31.91■■■□□ 2.7
SH3GL3-205ENST00000563901 NF2P35240 595 aa31.91■■■□□ 2.7
SH3GL3-205ENST00000563901 TFAP4Q01664 338 aa31.91■■■□□ 2.7
SH3GL3-205ENST00000563901 IL17RAQ96F46 866 aa31.91■■■□□ 2.7
SH3GL3-205ENST00000563901 ZKSCAN3Q9BRR0 538 aa31.91■■■□□ 2.7
SH3GL3-205ENST00000563901 ZSWIM5Q9P217 1185 aa31.91■■■□□ 2.7
SH3GL3-205ENST00000563901 TOMM70O94826 608 aa31.9■■■□□ 2.7
SH3GL3-205ENST00000563901 INPP5BP32019 993 aa31.9■■■□□ 2.7
SH3GL3-205ENST00000563901 ANTXR2P58335 489 aa31.9■■■□□ 2.7
SH3GL3-205ENST00000563901 SMC1BQ8NDV3 1235 aa31.9■■■□□ 2.7
SH3GL3-205ENST00000563901 ESR2Q92731 530 aa31.9■■■□□ 2.7
SH3GL3-205ENST00000563901 WRNIP1Q96S55 665 aa31.9■■■□□ 2.7
SH3GL3-205ENST00000563901 TSPY2A6NKD2 308 aa31.89■■■□□ 2.7
SH3GL3-205ENST00000563901 MPHOSPH10O00566 681 aaKnown RBP31.89■■■□□ 2.7
SH3GL3-205ENST00000563901 NMT2O60551 498 aa31.89■■■□□ 2.7
SH3GL3-205ENST00000563901 ANGEL1Q9UNK9 670 aaKnown RBP31.89■■■□□ 2.7
SH3GL3-205ENST00000563901 TTLL12Q14166 644 aaPredicted RBP31.89■■■□□ 2.7
SH3GL3-205ENST00000563901 CLEC10AQ8IUN9 316 aa31.89■■■□□ 2.7
SH3GL3-205ENST00000563901 KLRG1Q96E93 195 aa31.89■■■□□ 2.7
SH3GL3-205ENST00000563901 LRRC2Q9BYS8 371 aa31.89■■■□□ 2.7
SH3GL3-205ENST00000563901 CELF2O95319 508 aaKnown RBP31.88■■■□□ 2.69
SH3GL3-205ENST00000563901 TSPY3P0CV98 308 aa31.88■■■□□ 2.69
SH3GL3-205ENST00000563901 TSPY8P0CW00 308 aa31.88■■■□□ 2.69
SH3GL3-205ENST00000563901 BLOC1S2Q6QNY1 142 aa31.88■■■□□ 2.69
SH3GL3-205ENST00000563901 RBM46Q8TBY0 533 aaKnown RBP31.88■■■□□ 2.69
SH3GL3-205ENST00000563901 ZKSCAN4Q969J2 545 aaPredicted RBP31.88■■■□□ 2.69
SH3GL3-205ENST00000563901 GNL3Q9BVP2 549 aaKnown RBP eCLIP31.88■■■□□ 2.69
SH3GL3-205ENST00000563901 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.88■■■□□ 2.69
SH3GL3-205ENST00000563901 ZNF112Q9UJU3 913 aa31.88■■■□□ 2.69
SH3GL3-205ENST00000563901 ABCB5Q2M3G0 1257 aa31.87■■■□□ 2.69
SH3GL3-205ENST00000563901 ZSWIM6Q9HCJ5 1215 aa31.87■■■□□ 2.69
SH3GL3-205ENST00000563901 PPP1R12BO60237 982 aaPredicted RBP31.86■■■□□ 2.69
SH3GL3-205ENST00000563901 GH2P01242 217 aa31.86■■■□□ 2.69
SH3GL3-205ENST00000563901 PSMA5P28066 241 aa31.86■■■□□ 2.69
SH3GL3-205ENST00000563901 CAP2P40123 477 aa31.86■■■□□ 2.69
SH3GL3-205ENST00000563901 CST9Q5W186 159 aa31.86■■■□□ 2.69
SH3GL3-205ENST00000563901 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.86■■■□□ 2.69
SH3GL3-205ENST00000563901 TM6SF1Q9BZW5 370 aa31.86■■■□□ 2.69
SH3GL3-205ENST00000563901 TAOK2Q9UL54 1235 aa31.86■■■□□ 2.69
SH3GL3-205ENST00000563901 PASKQ96RG2 1323 aa31.86■■■□□ 2.69
SH3GL3-205ENST00000563901 PRC1O43663 620 aa31.86■■■□□ 2.69
SH3GL3-205ENST00000563901 RPS6KB1P23443 525 aa31.86■■■□□ 2.69
SH3GL3-205ENST00000563901 GPHNQ9NQX3 736 aaPredicted RBP31.86■■■□□ 2.69
SH3GL3-205ENST00000563901 GUCY1A2P33402 732 aa31.85■■■□□ 2.69
SH3GL3-205ENST00000563901 RUFY3Q7L099 469 aa31.85■■■□□ 2.69
SH3GL3-205ENST00000563901 CCDC84Q86UT8 332 aaPredicted RBP31.85■■■□□ 2.69
SH3GL3-205ENST00000563901 IL17RBQ9NRM6 502 aa31.85■■■□□ 2.69
SH3GL3-205ENST00000563901 MYH4Q9Y623 1939 aa31.85■■■□□ 2.69
SH3GL3-205ENST00000563901 MCM5P33992 734 aa31.84■■■□□ 2.69
SH3GL3-205ENST00000563901 DHX32Q7L7V1 743 aaKnown RBP31.84■■■□□ 2.69
SH3GL3-205ENST00000563901 NEDD1Q8NHV4 660 aa31.84■■■□□ 2.69
SH3GL3-205ENST00000563901 CCDC17Q96LX7 622 aa31.84■■■□□ 2.69
SH3GL3-205ENST00000563901 ZBTB21Q9ULJ3 1066 aa31.84■■■□□ 2.69
SH3GL3-205ENST00000563901 CYP46A1Q9Y6A2 500 aa31.84■■■□□ 2.69
SH3GL3-205ENST00000563901 UBE2Q2LH0YL09 131 aa31.83■■■□□ 2.69
SH3GL3-205ENST00000563901 EXOSC10Q01780 885 aaKnown RBP31.83■■■□□ 2.69
SH3GL3-205ENST00000563901 SEPT2Q15019 361 aa31.83■■■□□ 2.69
SH3GL3-205ENST00000563901 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.83■■■□□ 2.69
SH3GL3-205ENST00000563901 PLIN4Q96Q06 1357 aa31.83■■■□□ 2.69
SH3GL3-205ENST00000563901 PHIPQ8WWQ0 1821 aa31.83■■■□□ 2.69
SH3GL3-205ENST00000563901 IREB2P48200 963 aaKnown RBP31.82■■■□□ 2.69
SH3GL3-205ENST00000563901 RAB3GAP1Q15042 981 aa31.82■■■□□ 2.69
SH3GL3-205ENST00000563901 GBA2Q9HCG7 927 aaPredicted RBP31.82■■■□□ 2.69
SH3GL3-205ENST00000563901 CTNND1O60716 968 aaKnown RBP31.82■■■□□ 2.68
SH3GL3-205ENST00000563901 HMGB1P09429 215 aaKnown RBP31.82■■■□□ 2.68
SH3GL3-205ENST00000563901 VGLL4Q14135 290 aa31.82■■■□□ 2.68
SH3GL3-205ENST00000563901 CEP95Q96GE4 821 aa31.82■■■□□ 2.68
SH3GL3-205ENST00000563901 CLMNQ96JQ2 1002 aa31.82■■■□□ 2.68
SH3GL3-205ENST00000563901 SENP2Q9HC62 589 aa31.82■■■□□ 2.68
SH3GL3-205ENST00000563901 NEK4P51957 841 aa31.81■■■□□ 2.68
SH3GL3-205ENST00000563901 ARMC9Q7Z3E5 817 aa31.81■■■□□ 2.68
SH3GL3-205ENST00000563901 TNKSO95271 1327 aa31.8■■■□□ 2.68
SH3GL3-205ENST00000563901 IGKV6D-41A0A0C4DH26 115 aa31.8■■■□□ 2.68
SH3GL3-205ENST00000563901 MAP3K9P80192 1104 aa31.8■■■□□ 2.68
SH3GL3-205ENST00000563901 MAP3K11Q16584 847 aa31.8■■■□□ 2.68
SH3GL3-205ENST00000563901 TMEM179Q6ZVK1 233 aa31.8■■■□□ 2.68
SH3GL3-205ENST00000563901 SCYL3Q8IZE3 742 aa31.8■■■□□ 2.68
SH3GL3-205ENST00000563901 ZSCAN10Q96SZ4 725 aaPredicted RBP31.8■■■□□ 2.68
SH3GL3-205ENST00000563901 UBAC1Q9BSL1 405 aa31.8■■■□□ 2.68
SH3GL3-205ENST00000563901 CABP5Q9NP86 173 aa31.8■■■□□ 2.68
SH3GL3-205ENST00000563901 PDRG1Q9NUG6 133 aa31.79■■■□□ 2.68
SH3GL3-205ENST00000563901 SNCAIPQ9Y6H5 919 aa31.79■■■□□ 2.68
SH3GL3-205ENST00000563901 IFIT3O14879 490 aaKnown RBP31.78■■■□□ 2.68
SH3GL3-205ENST00000563901 RABEP1Q15276 862 aa31.78■■■□□ 2.68
SH3GL3-205ENST00000563901 Q6ZUG5 572 aa31.78■■■□□ 2.68
SH3GL3-205ENST00000563901 IQCA1Q86XH1 822 aa31.78■■■□□ 2.68
SH3GL3-205ENST00000563901 ENAHQ8N8S7 591 aaPredicted RBP31.78■■■□□ 2.68
SH3GL3-205ENST00000563901 LARP6Q9BRS8 491 aaKnown RBP31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms