RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 EPOPA6NHQ4 379 aa14.06□□□□□ -0.16
HDGFL3-204ENST00000563790 H0Y858 1186 aa14.06□□□□□ -0.16
HDGFL3-204ENST00000563790 ANXA1P04083 346 aa14.06□□□□□ -0.16
HDGFL3-204ENST00000563790 IRS1P35568 1242 aa14.06□□□□□ -0.16
HDGFL3-204ENST00000563790 ZP2Q05996 745 aa14.06□□□□□ -0.16
HDGFL3-204ENST00000563790 ZNF365Q70YC5 407 aa14.06□□□□□ -0.16
HDGFL3-204ENST00000563790 FBXL6Q8N531 539 aa14.06□□□□□ -0.16
HDGFL3-204ENST00000563790 TLR9Q9NR96 1032 aa14.06□□□□□ -0.16
HDGFL3-204ENST00000563790 AFG3L2Q9Y4W6 797 aa14.06□□□□□ -0.16
HDGFL3-204ENST00000563790 PCDHA11Q9Y5I1 949 aa14.06□□□□□ -0.16
HDGFL3-204ENST00000563790 HSP90B1P14625 803 aaKnown RBP14.05□□□□□ -0.16
HDGFL3-204ENST00000563790 RGS2P41220 211 aa14.05□□□□□ -0.16
HDGFL3-204ENST00000563790 DCTN1Q14203 1278 aa14.05□□□□□ -0.16
HDGFL3-204ENST00000563790 XAGE3Q8WTP9 111 aa14.05□□□□□ -0.16
HDGFL3-204ENST00000563790 EDAQ92838 391 aa14.05□□□□□ -0.16
HDGFL3-204ENST00000563790 APBA2Q99767 749 aa14.05□□□□□ -0.16
HDGFL3-204ENST00000563790 MORF4L1Q9UBU8 362 aa14.05□□□□□ -0.16
HDGFL3-204ENST00000563790 TMEM221A6NGB7 291 aa14.04□□□□□ -0.16
HDGFL3-204ENST00000563790 M0R296 226 aa14.04□□□□□ -0.16
HDGFL3-204ENST00000563790 MYOGP15173 224 aa14.04□□□□□ -0.16
HDGFL3-204ENST00000563790 RABGGTBP53611 331 aa14.04□□□□□ -0.16
HDGFL3-204ENST00000563790 AIMP1Q12904 312 aaKnown RBP14.04□□□□□ -0.16
HDGFL3-204ENST00000563790 FERMT2Q96AC1 680 aa14.04□□□□□ -0.16
HDGFL3-204ENST00000563790 MTIF3Q9H2K0 278 aaKnown RBP14.04□□□□□ -0.16
HDGFL3-204ENST00000563790 PRKAG3Q9UGI9 489 aa14.04□□□□□ -0.16
HDGFL3-204ENST00000563790 ZHX2Q9Y6X8 837 aa14.04□□□□□ -0.16
HDGFL3-204ENST00000563790 PQBP1O60828 265 aaKnown RBP14.03□□□□□ -0.16
HDGFL3-204ENST00000563790 KCNA5P22460 613 aa14.03□□□□□ -0.16
HDGFL3-204ENST00000563790 CNGA1P29973 690 aa14.03□□□□□ -0.16
HDGFL3-204ENST00000563790 CACNB3P54284 484 aa14.03□□□□□ -0.16
HDGFL3-204ENST00000563790 FAAP100Q0VG06 881 aa14.03□□□□□ -0.16
HDGFL3-204ENST00000563790 PUS10Q3MIT2 529 aaKnown RBP14.03□□□□□ -0.16
HDGFL3-204ENST00000563790 FKBP1CQ5VVH2 108 aa14.03□□□□□ -0.16
HDGFL3-204ENST00000563790 MFSD14CQ5VZR4 134 aa14.03□□□□□ -0.16
HDGFL3-204ENST00000563790 TDRD7Q8NHU6 1098 aaKnown RBP14.03□□□□□ -0.16
HDGFL3-204ENST00000563790 NKD2Q969F2 451 aaPredicted RBP14.03□□□□□ -0.16
HDGFL3-204ENST00000563790 CDC5LQ99459 802 aaKnown RBP14.03□□□□□ -0.16
HDGFL3-204ENST00000563790 ATAD5Q96QE3 1844 aa14.03□□□□□ -0.16
HDGFL3-204ENST00000563790 MYO7AQ13402 2215 aa14.03□□□□□ -0.16
HDGFL3-204ENST00000563790 ZNF536O15090 1300 aa14.02□□□□□ -0.17
HDGFL3-204ENST00000563790 IL1R1P14778 569 aa14.02□□□□□ -0.17
HDGFL3-204ENST00000563790 MORN1Q5T089 497 aa14.02□□□□□ -0.17
HDGFL3-204ENST00000563790 TREML2Q5T2D2 321 aa14.02□□□□□ -0.17
HDGFL3-204ENST00000563790 TRIM67Q6ZTA4 783 aa14.02□□□□□ -0.17
HDGFL3-204ENST00000563790 TOX2Q96NM4 488 aa14.02□□□□□ -0.17
HDGFL3-204ENST00000563790 CCDC85AQ96PX6 553 aaPredicted RBP14.02□□□□□ -0.17
HDGFL3-204ENST00000563790 MUTYHQ9UIF7 546 aa14.02□□□□□ -0.17
HDGFL3-204ENST00000563790 TTF2Q9UNY4 1162 aaKnown RBP14.02□□□□□ -0.17
HDGFL3-204ENST00000563790 JAG2Q9Y219 1238 aa14.02□□□□□ -0.17
HDGFL3-204ENST00000563790 ATP5J2-PTCD1G3V325 749 aa14.01□□□□□ -0.17
HDGFL3-204ENST00000563790 HTATSF1O43719 755 aaKnown RBP14.01□□□□□ -0.17
HDGFL3-204ENST00000563790 ACRP10323 421 aa14.01□□□□□ -0.17
HDGFL3-204ENST00000563790 CSF2RAP15509 400 aa14.01□□□□□ -0.17
HDGFL3-204ENST00000563790 MAP2K5Q13163 448 aa14.01□□□□□ -0.17
HDGFL3-204ENST00000563790 TRIM28Q13263 835 aaKnown RBP14.01□□□□□ -0.17
HDGFL3-204ENST00000563790 ANKRD33Q7Z3H0 272 aa14.01□□□□□ -0.17
HDGFL3-204ENST00000563790 PNISRQ8TF01 805 aaKnown RBP14.01□□□□□ -0.17
HDGFL3-204ENST00000563790 DLL3Q9NYJ7 618 aa14.01□□□□□ -0.17
HDGFL3-204ENST00000563790 TBX21Q9UL17 535 aa14.01□□□□□ -0.17
HDGFL3-204ENST00000563790 SMG1Q96Q15 3661 aaKnown RBP14.01□□□□□ -0.17
HDGFL3-204ENST00000563790 COL11A1P12107 1806 aaPredicted RBP14□□□□□ -0.17
HDGFL3-204ENST00000563790 PDE8AO60658 829 aa14□□□□□ -0.17
HDGFL3-204ENST00000563790 PTPRAP18433 802 aa14□□□□□ -0.17
HDGFL3-204ENST00000563790 CRKP46108 304 aa14□□□□□ -0.17
HDGFL3-204ENST00000563790 NUBP1P53384 320 aa14□□□□□ -0.17
HDGFL3-204ENST00000563790 VCPP55072 806 aaKnown RBP14□□□□□ -0.17
HDGFL3-204ENST00000563790 CERS4Q9HA82 394 aa14□□□□□ -0.17
HDGFL3-204ENST00000563790 CNOT1A5YKK6 2376 aaKnown RBP13.99□□□□□ -0.17
HDGFL3-204ENST00000563790 SOBPA7XYQ1 873 aa13.99□□□□□ -0.17
HDGFL3-204ENST00000563790 LPXNO60711 386 aa13.99□□□□□ -0.17
HDGFL3-204ENST00000563790 GRB10Q13322 594 aa13.99□□□□□ -0.17
HDGFL3-204ENST00000563790 ADHFE1Q8IWW8 467 aa13.99□□□□□ -0.17
HDGFL3-204ENST00000563790 TRPV1Q8NER1 839 aa13.99□□□□□ -0.17
HDGFL3-204ENST00000563790 FLRT1Q9NZU1 646 aa13.99□□□□□ -0.17
HDGFL3-204ENST00000563790 LMCD1Q9NZU5 365 aa13.99□□□□□ -0.17
HDGFL3-204ENST00000563790 PHF24Q9UPV7 400 aa13.99□□□□□ -0.17
HDGFL3-204ENST00000563790 SIP14410 1827 aa13.99□□□□□ -0.17
HDGFL3-204ENST00000563790 U2SURPO15042 1029 aaKnown RBP13.98□□□□□ -0.17
HDGFL3-204ENST00000563790 AVPR2P30518 371 aa13.98□□□□□ -0.17
HDGFL3-204ENST00000563790 MAPK4P31152 587 aa13.98□□□□□ -0.17
HDGFL3-204ENST00000563790 EIF4G2P78344 907 aaKnown RBP eCLIP13.98□□□□□ -0.17
HDGFL3-204ENST00000563790 LRRC41Q15345 812 aa13.98□□□□□ -0.17
HDGFL3-204ENST00000563790 C15orf52Q6ZUT6 534 aaKnown RBP13.98□□□□□ -0.17
HDGFL3-204ENST00000563790 TMEM199Q8N511 208 aa13.98□□□□□ -0.17
HDGFL3-204ENST00000563790 PROCA1Q8NCQ7 364 aaPredicted RBP13.98□□□□□ -0.17
HDGFL3-204ENST00000563790 PLBD2Q8NHP8 589 aa13.98□□□□□ -0.17
HDGFL3-204ENST00000563790 ITPR1Q14643 2758 aa13.97□□□□□ -0.17
HDGFL3-204ENST00000563790 DCDC2CA8MYV0 355 aa13.97□□□□□ -0.17
HDGFL3-204ENST00000563790 CA3P07451 260 aa13.97□□□□□ -0.17
HDGFL3-204ENST00000563790 CYBAP13498 195 aa13.97□□□□□ -0.17
HDGFL3-204ENST00000563790 EIF2S2P20042 333 aaKnown RBP13.97□□□□□ -0.17
HDGFL3-204ENST00000563790 MCTP2Q6DN12 878 aa13.97□□□□□ -0.17
HDGFL3-204ENST00000563790 SCYL3Q8IZE3 742 aa13.97□□□□□ -0.17
HDGFL3-204ENST00000563790 ASCC2Q9H1I8 757 aaPredicted RBP13.97□□□□□ -0.17
HDGFL3-204ENST00000563790 IL23AQ9NPF7 189 aa13.97□□□□□ -0.17
HDGFL3-204ENST00000563790 PICK1Q9NRD5 415 aa13.97□□□□□ -0.17
HDGFL3-204ENST00000563790 TMOD2Q9NZR1 351 aa13.97□□□□□ -0.17
HDGFL3-204ENST00000563790 ZNF236Q9UL36 1845 aa13.97□□□□□ -0.17
HDGFL3-204ENST00000563790 ZNFX1Q9P2E3 1918 aaKnown RBP13.96□□□□□ -0.17
HDGFL3-204ENST00000563790 IGF2RP11717 2491 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms