RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 ENOX2Q16206 610 aaKnown RBP11.84□□□□□ -0.51
RNF40-204ENST00000563683 SERTAD1Q9UHV2 236 aa11.84□□□□□ -0.51
RNF40-204ENST00000563683 ZMYM6O95789 1325 aa11.84□□□□□ -0.51
RNF40-204ENST00000563683 IVLP07476 585 aa11.84□□□□□ -0.51
RNF40-204ENST00000563683 HIBADHP31937 336 aaKnown RBP11.84□□□□□ -0.51
RNF40-204ENST00000563683 CCDC96Q2M329 555 aa11.84□□□□□ -0.51
RNF40-204ENST00000563683 NOSTRINQ8IVI9 506 aa11.84□□□□□ -0.51
RNF40-204ENST00000563683 FANCBQ8NB91 859 aa11.84□□□□□ -0.51
RNF40-204ENST00000563683 LRRN4CLQ8ND94 238 aa11.84□□□□□ -0.51
RNF40-204ENST00000563683 SMARCC2Q8TAQ2 1214 aa11.84□□□□□ -0.51
RNF40-204ENST00000563683 DENND2AQ9ULE3 1009 aa11.84□□□□□ -0.51
RNF40-204ENST00000563683 ZNF609O15014 1411 aa11.84□□□□□ -0.51
RNF40-204ENST00000563683 RTL9Q8NET4 1388 aa11.84□□□□□ -0.51
RNF40-204ENST00000563683 LOC102724428A0A0B4J2F2 783 aa11.84□□□□□ -0.51
RNF40-204ENST00000563683 A0A1W2PQ27 194 aa11.84□□□□□ -0.51
RNF40-204ENST00000563683 A0A1W2PQ64 194 aa11.84□□□□□ -0.51
RNF40-204ENST00000563683 A0A1W2PQD8 194 aa11.84□□□□□ -0.51
RNF40-204ENST00000563683 CCT6AP40227 531 aaKnown RBP11.84□□□□□ -0.51
RNF40-204ENST00000563683 SIK1P57059 783 aa11.84□□□□□ -0.51
RNF40-204ENST00000563683 KIF23Q02241 960 aaPredicted RBP11.84□□□□□ -0.51
RNF40-204ENST00000563683 CC2D1AQ6P1N0 951 aaPredicted RBP11.84□□□□□ -0.51
RNF40-204ENST00000563683 TRIM47Q96LD4 638 aa11.84□□□□□ -0.51
RNF40-204ENST00000563683 UBXN6Q9BZV1 441 aa11.84□□□□□ -0.51
RNF40-204ENST00000563683 BMP2KQ9NSY1 1161 aaPredicted RBP11.84□□□□□ -0.51
RNF40-204ENST00000563683 C1orf167Q5SNV9 1468 aa11.84□□□□□ -0.51
RNF40-204ENST00000563683 AKAP12Q02952 1782 aa11.84□□□□□ -0.51
RNF40-204ENST00000563683 CRKLP46109 303 aaKnown RBP11.83□□□□□ -0.52
RNF40-204ENST00000563683 MTIF2P46199 727 aaKnown RBP11.83□□□□□ -0.52
RNF40-204ENST00000563683 RNF216Q9NWF9 866 aaPredicted RBP11.83□□□□□ -0.52
RNF40-204ENST00000563683 MYO1CO00159 1063 aa11.83□□□□□ -0.52
RNF40-204ENST00000563683 TOM1O60784 492 aa11.83□□□□□ -0.52
RNF40-204ENST00000563683 BMP15O95972 392 aa11.83□□□□□ -0.52
RNF40-204ENST00000563683 PICALMQ13492 652 aa11.83□□□□□ -0.52
RNF40-204ENST00000563683 SAP30BPQ9UHR5 308 aaKnown RBP11.83□□□□□ -0.52
RNF40-204ENST00000563683 RTCBQ9Y3I0 505 aaKnown RBP11.83□□□□□ -0.52
RNF40-204ENST00000563683 PCDHA5Q9Y5H7 936 aa11.83□□□□□ -0.52
RNF40-204ENST00000563683 TNKSO95271 1327 aa11.83□□□□□ -0.52
RNF40-204ENST00000563683 MED23Q9ULK4 1368 aa11.83□□□□□ -0.52
RNF40-204ENST00000563683 SEC31AO94979 1220 aaKnown RBP11.83□□□□□ -0.52
RNF40-204ENST00000563683 CALM1P0DP23 149 aa11.83□□□□□ -0.52
RNF40-204ENST00000563683 CALM2P0DP24 149 aa11.83□□□□□ -0.52
RNF40-204ENST00000563683 CALM3P0DP25 149 aa11.83□□□□□ -0.52
RNF40-204ENST00000563683 SLC39A14Q15043 492 aa11.83□□□□□ -0.52
RNF40-204ENST00000563683 POSTNQ15063 836 aa11.83□□□□□ -0.52
RNF40-204ENST00000563683 BAG1Q99933 345 aaPredicted RBP11.83□□□□□ -0.52
RNF40-204ENST00000563683 FANCLQ9NW38 375 aa11.83□□□□□ -0.52
RNF40-204ENST00000563683 LDHBP07195 334 aaKnown RBP11.82□□□□□ -0.52
RNF40-204ENST00000563683 IL6STP40189 918 aaPredicted RBP11.82□□□□□ -0.52
RNF40-204ENST00000563683 RASGRF1Q13972 1273 aa11.82□□□□□ -0.52
RNF40-204ENST00000563683 CCDC178Q5BJE1 867 aa11.82□□□□□ -0.52
RNF40-204ENST00000563683 USPL1Q5W0Q7 1092 aa11.82□□□□□ -0.52
RNF40-204ENST00000563683 C10orf67Q8IYJ2 551 aa11.82□□□□□ -0.52
RNF40-204ENST00000563683 FMR1NBQ8N0W7 255 aaPredicted RBP11.82□□□□□ -0.52
RNF40-204ENST00000563683 CRACR2BQ8N4Y2 399 aaPredicted RBP11.82□□□□□ -0.52
RNF40-204ENST00000563683 IQUBQ8NA54 791 aa11.82□□□□□ -0.52
RNF40-204ENST00000563683 SETD1AO15047 1707 aaKnown RBP11.82□□□□□ -0.52
RNF40-204ENST00000563683 TBC1D8O95759 1140 aa11.82□□□□□ -0.52
RNF40-204ENST00000563683 DNA2P51530 1060 aa11.82□□□□□ -0.52
RNF40-204ENST00000563683 ST5P78524 1137 aa11.82□□□□□ -0.52
RNF40-204ENST00000563683 NR5A1Q13285 461 aa11.82□□□□□ -0.52
RNF40-204ENST00000563683 SUSD4Q5VX71 490 aa11.82□□□□□ -0.52
RNF40-204ENST00000563683 LCORLQ8N3X6 602 aa11.82□□□□□ -0.52
RNF40-204ENST00000563683 TCEAL9Q9UHQ7 104 aa11.82□□□□□ -0.52
RNF40-204ENST00000563683 IKBKBO14920 756 aa11.82□□□□□ -0.52
RNF40-204ENST00000563683 LMAN1P49257 510 aa11.82□□□□□ -0.52
RNF40-204ENST00000563683 NAPAP54920 295 aa11.82□□□□□ -0.52
RNF40-204ENST00000563683 RABGGTAQ92696 567 aa11.82□□□□□ -0.52
RNF40-204ENST00000563683 ISCA1Q9BUE6 129 aa11.82□□□□□ -0.52
RNF40-204ENST00000563683 VPS16Q9H269 839 aa11.82□□□□□ -0.52
RNF40-204ENST00000563683 ACBD3Q9H3P7 528 aa11.82□□□□□ -0.52
RNF40-204ENST00000563683 POLR3EQ9NVU0 708 aa11.82□□□□□ -0.52
RNF40-204ENST00000563683 UTYO14607 1347 aa11.82□□□□□ -0.52
RNF40-204ENST00000563683 CCDC102AQ96A19 550 aa11.81□□□□□ -0.52
RNF40-204ENST00000563683 CCDC43Q96MW1 224 aaKnown RBP11.81□□□□□ -0.52
RNF40-204ENST00000563683 RUFY1Q96T51 708 aa11.81□□□□□ -0.52
RNF40-204ENST00000563683 CYP2D7A0A087X1C5 515 aa11.81□□□□□ -0.52
RNF40-204ENST00000563683 MYO1BO43795 1136 aa11.81□□□□□ -0.52
RNF40-204ENST00000563683 ERLIN1O75477 346 aa11.81□□□□□ -0.52
RNF40-204ENST00000563683 ADKP55263 362 aaKnown RBP11.81□□□□□ -0.52
RNF40-204ENST00000563683 RPS8P62241 208 aaKnown RBP11.81□□□□□ -0.52
RNF40-204ENST00000563683 TBC1D10CQ8IV04 446 aa11.81□□□□□ -0.52
RNF40-204ENST00000563683 GOLGA1Q92805 767 aa11.81□□□□□ -0.52
RNF40-204ENST00000563683 ARHGAP6O43182 974 aa11.81□□□□□ -0.52
RNF40-204ENST00000563683 EIF3JO75822 258 aaKnown RBP11.81□□□□□ -0.52
RNF40-204ENST00000563683 TRIM21P19474 475 aaKnown RBP11.81□□□□□ -0.52
RNF40-204ENST00000563683 GOLGA8FQ08AF8 430 aa11.81□□□□□ -0.52
RNF40-204ENST00000563683 GOLGA8DPQ0D2H9 430 aa11.81□□□□□ -0.52
RNF40-204ENST00000563683 TRIM65Q6PJ69 517 aa11.81□□□□□ -0.52
RNF40-204ENST00000563683 STRBPQ96SI9 672 aaKnown RBP11.81□□□□□ -0.52
RNF40-204ENST00000563683 NYXQ9GZU5 481 aa11.81□□□□□ -0.52
RNF40-204ENST00000563683 PARP3Q9Y6F1 533 aa11.81□□□□□ -0.52
RNF40-204ENST00000563683 PXDNQ92626 1479 aa11.81□□□□□ -0.52
RNF40-204ENST00000563683 LMTK3Q96Q04 1460 aa11.81□□□□□ -0.52
RNF40-204ENST00000563683 ACTN2P35609 894 aa11.81□□□□□ -0.52
RNF40-204ENST00000563683 DYNLL1P63167 89 aaKnown RBP11.81□□□□□ -0.52
RNF40-204ENST00000563683 PPP2R3AQ06190 1150 aa11.81□□□□□ -0.52
RNF40-204ENST00000563683 COL9A3Q14050 684 aaPredicted RBP11.81□□□□□ -0.52
RNF40-204ENST00000563683 BRD3Q15059 726 aa11.81□□□□□ -0.52
RNF40-204ENST00000563683 BLZF1Q9H2G9 400 aa11.81□□□□□ -0.52
RNF40-204ENST00000563683 CTDP1Q9Y5B0 961 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms