RNA–Protein interactions for RNA: ENST00000563679.5

PDXDC1-210, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-210ENST00000563679 MECOMQ03112 1051 aa11.42□□□□□ -0.58
PDXDC1-210ENST00000563679 GNL2Q13823 731 aaKnown RBP11.42□□□□□ -0.58
PDXDC1-210ENST00000563679 METTL16Q86W50 562 aaKnown RBP11.42□□□□□ -0.58
PDXDC1-210ENST00000563679 ZKSCAN3Q9BRR0 538 aa11.42□□□□□ -0.58
PDXDC1-210ENST00000563679 NAV1Q8NEY1 1877 aa11.42□□□□□ -0.58
PDXDC1-210ENST00000563679 A0A0G2JS52 829 aa11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 KLRK1P26718 216 aa11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 KCNJ6P48051 423 aa11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 RRP12Q5JTH9 1297 aaKnown RBP11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 TPTE2Q6XPS3 522 aa11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 PTF1AQ7RTS3 328 aa11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 DRC7Q8IY82 874 aa11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 TNFRSF25Q93038 417 aa11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 MAP7D2Q96T17 732 aa11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 KCNH3Q9ULD8 1083 aa11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 IQSEC3Q9UPP2 1182 aaPredicted RBP11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 SRPRBQ9Y5M8 271 aaKnown RBP11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 CDK5RAP2Q96SN8 1893 aa11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 SPATA31A6Q5VVP1 1343 aa11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 A0A087WWV3 80 aa11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 CCZ1BP86790 482 aa11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 CCZ1P86791 482 aaPredicted RBP11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 NBPF5PQ86XG9 351 aaPredicted RBP11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 DCP1AQ9NPI6 582 aaPredicted RBP11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 ARPP21Q9UBL0 812 aaPredicted RBP11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 SRP68Q9UHB9 627 aaKnown RBP11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 MKRN1Q9UHC7 482 aaKnown RBP11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 CEP131Q9UPN4 1083 aa11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 LTBP1Q14766 1721 aa11.41□□□□□ -0.58
PDXDC1-210ENST00000563679 TMTC3Q6ZXV5 915 aa11.4□□□□□ -0.58
PDXDC1-210ENST00000563679 MTERF4Q7Z6M4 381 aaKnown RBP11.4□□□□□ -0.58
PDXDC1-210ENST00000563679 ANKS1AQ92625 1134 aa11.4□□□□□ -0.58
PDXDC1-210ENST00000563679 ERCC4Q92889 916 aaPredicted RBP11.4□□□□□ -0.58
PDXDC1-210ENST00000563679 CRNKL1Q9BZJ0 848 aaKnown RBP11.4□□□□□ -0.58
PDXDC1-210ENST00000563679 MINDY4BA8MYZ0 360 aa11.4□□□□□ -0.58
PDXDC1-210ENST00000563679 SARSP49591 514 aaKnown RBP11.4□□□□□ -0.58
PDXDC1-210ENST00000563679 CATIPQ7Z7H3 387 aa11.4□□□□□ -0.58
PDXDC1-210ENST00000563679 SPATA20Q8TB22 786 aa11.4□□□□□ -0.58
PDXDC1-210ENST00000563679 CLIC6Q96NY7 704 aa11.4□□□□□ -0.58
PDXDC1-210ENST00000563679 KCNJ14Q9UNX9 436 aa11.4□□□□□ -0.58
PDXDC1-210ENST00000563679 SMIM22K7EJ46 135 aa11.4□□□□□ -0.59
PDXDC1-210ENST00000563679 ZPR1O75312 459 aa11.4□□□□□ -0.59
PDXDC1-210ENST00000563679 TPM4P67936 248 aa11.4□□□□□ -0.59
PDXDC1-210ENST00000563679 ZRSR1Q15695 479 aaKnown RBP11.4□□□□□ -0.59
PDXDC1-210ENST00000563679 NPY5RQ15761 445 aa11.4□□□□□ -0.59
PDXDC1-210ENST00000563679 SPTY2D1Q68D10 685 aaPredicted RBP11.4□□□□□ -0.59
PDXDC1-210ENST00000563679 IQCA1Q86XH1 822 aa11.4□□□□□ -0.59
PDXDC1-210ENST00000563679 PDCL3Q9H2J4 239 aa11.4□□□□□ -0.59
PDXDC1-210ENST00000563679 RTCBQ9Y3I0 505 aaKnown RBP11.4□□□□□ -0.59
PDXDC1-210ENST00000563679 CNTNAP5Q8WYK1 1306 aa11.39□□□□□ -0.59
PDXDC1-210ENST00000563679 GNPATO15228 680 aa11.39□□□□□ -0.59
PDXDC1-210ENST00000563679 CTIFO43310 598 aaKnown RBP11.39□□□□□ -0.59
PDXDC1-210ENST00000563679 BMP15O95972 392 aa11.39□□□□□ -0.59
PDXDC1-210ENST00000563679 LONRF3Q496Y0 759 aa11.39□□□□□ -0.59
PDXDC1-210ENST00000563679 IFIT1BQ5T764 474 aaKnown RBP11.39□□□□□ -0.59
PDXDC1-210ENST00000563679 ARHGEF1Q92888 912 aaKnown RBP11.39□□□□□ -0.59
PDXDC1-210ENST00000563679 TOMM22Q9NS69 142 aa11.39□□□□□ -0.59
PDXDC1-210ENST00000563679 LEMD3Q9Y2U8 911 aa11.39□□□□□ -0.59
PDXDC1-210ENST00000563679 XBP1P17861 261 aa11.39□□□□□ -0.59
PDXDC1-210ENST00000563679 CT47A1Q5JQC4 288 aaPredicted RBP11.39□□□□□ -0.59
PDXDC1-210ENST00000563679 DNTTIP2Q5QJE6 756 aaKnown RBP11.39□□□□□ -0.59
PDXDC1-210ENST00000563679 AMIGO3Q86WK7 504 aa11.39□□□□□ -0.59
PDXDC1-210ENST00000563679 FOXP4Q8IVH2 680 aaPredicted RBP11.39□□□□□ -0.59
PDXDC1-210ENST00000563679 TRIML1Q8N9V2 468 aa11.39□□□□□ -0.59
PDXDC1-210ENST00000563679 CCDC150Q8NCX0 1101 aa11.39□□□□□ -0.59
PDXDC1-210ENST00000563679 NGLY1Q96IV0 654 aa11.39□□□□□ -0.59
PDXDC1-210ENST00000563679 AATFQ9NY61 560 aaKnown RBP eCLIP11.39□□□□□ -0.59
PDXDC1-210ENST00000563679 CCNL1Q9UK58 526 aaPredicted RBP11.39□□□□□ -0.59
PDXDC1-210ENST00000563679 FOCADQ5VW36 1801 aa11.39□□□□□ -0.59
PDXDC1-210ENST00000563679 USP17L12C9JPN9 530 aa11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 USP17L21D6R901 530 aa11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 ONECUT3O60422 494 aaPredicted RBP11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 ADRA2BP18089 450 aa11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 GTF2E1P29083 439 aaPredicted RBP11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 MYL5Q02045 173 aa11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 NYAP1Q6ZVC0 841 aa11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 CERKQ8TCT0 537 aa11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 OXER1Q8TDS5 423 aa11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 FAM13BQ9NYF5 915 aa11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 HOOK1Q9UJC3 728 aaKnown RBP11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 PCDHB6Q9Y5E3 794 aa11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 CYP2D7A0A087X1C5 515 aa11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 ACTN4O43707 911 aaKnown RBP11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 KRT2P35908 639 aa11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 KCNQ4P56696 695 aa11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 PPP4CP60510 307 aa11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 NR5A1Q13285 461 aa11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 PNOCQ13519 176 aa11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 GRAPQ13588 217 aa11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 KANK3Q6NY19 840 aa11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 BICDL1Q6ZP65 573 aa11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 GRAPLQ8TC17 118 aaPredicted RBP11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 NUP133Q8WUM0 1156 aa11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 C8orf37Q96NL8 207 aa11.38□□□□□ -0.59
PDXDC1-210ENST00000563679 SYCP1Q15431 976 aa11.37□□□□□ -0.59
PDXDC1-210ENST00000563679 FAM177A1Q8N128 213 aaPredicted RBP11.37□□□□□ -0.59
PDXDC1-210ENST00000563679 XPO4Q9C0E2 1151 aaKnown RBP11.37□□□□□ -0.59
PDXDC1-210ENST00000563679 PLEKHA8P1O95397 391 aa11.37□□□□□ -0.59
PDXDC1-210ENST00000563679 BMP6P22004 513 aa11.37□□□□□ -0.59
PDXDC1-210ENST00000563679 PRDX5P30044 214 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms