RNA–Protein interactions for RNA: ENST00000563662.2

VAC14-204, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 3

Gene VAC14, Length 554 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-204ENST00000563662 KIF12Q96FN5 646 aa12.17□□□□□ -0.46
VAC14-204ENST00000563662 DDRGK1Q96HY6 314 aa12.17□□□□□ -0.46
VAC14-204ENST00000563662 BCL11AQ9H165 835 aa12.17□□□□□ -0.46
VAC14-204ENST00000563662 EHD4Q9H223 541 aa12.17□□□□□ -0.46
VAC14-204ENST00000563662 PAG1Q9NWQ8 432 aa12.17□□□□□ -0.46
VAC14-204ENST00000563662 CPA4Q9UI42 421 aa12.17□□□□□ -0.46
VAC14-204ENST00000563662 SERPINB13Q9UIV8 391 aa12.17□□□□□ -0.46
VAC14-204ENST00000563662 AGTPBP1Q9UPW5 1226 aa12.17□□□□□ -0.46
VAC14-204ENST00000563662 POLR3DP05423 398 aaPredicted RBP12.16□□□□□ -0.46
VAC14-204ENST00000563662 PDE6AP16499 860 aa12.16□□□□□ -0.46
VAC14-204ENST00000563662 GCLCP48506 637 aaPredicted RBP12.16□□□□□ -0.46
VAC14-204ENST00000563662 FCGRTP55899 365 aa12.16□□□□□ -0.46
VAC14-204ENST00000563662 SOX10P56693 466 aa12.16□□□□□ -0.46
VAC14-204ENST00000563662 BACE1P56817 501 aa12.16□□□□□ -0.46
VAC14-204ENST00000563662 SLC9C1Q4G0N8 1177 aa12.16□□□□□ -0.46
VAC14-204ENST00000563662 SH3D19Q5HYK7 790 aa12.16□□□□□ -0.46
VAC14-204ENST00000563662 AMOTL1Q8IY63 956 aa12.16□□□□□ -0.46
VAC14-204ENST00000563662 ARMC5Q96C12 935 aa12.16□□□□□ -0.46
VAC14-204ENST00000563662 HAUS7Q99871 368 aa12.16□□□□□ -0.46
VAC14-204ENST00000563662 BOLA2Q9H3K6 86 aa12.16□□□□□ -0.46
VAC14-204ENST00000563662 CABP5Q9NP86 173 aa12.16□□□□□ -0.46
VAC14-204ENST00000563662 ECHDC1Q9NTX5 307 aa12.16□□□□□ -0.46
VAC14-204ENST00000563662 SAP30BPQ9UHR5 308 aaKnown RBP12.16□□□□□ -0.46
VAC14-204ENST00000563662 AKAP11Q9UKA4 1901 aa12.15□□□□□ -0.46
VAC14-204ENST00000563662 FAM196BA6NMK8 535 aa12.15□□□□□ -0.46
VAC14-204ENST00000563662 USP17L10C9JJH3 530 aa12.15□□□□□ -0.46
VAC14-204ENST00000563662 UBE3CQ15386 1083 aa12.15□□□□□ -0.46
VAC14-204ENST00000563662 RAET1EQ8TD07 263 aa12.15□□□□□ -0.46
VAC14-204ENST00000563662 RIOK1Q9BRS2 568 aaKnown RBP12.15□□□□□ -0.46
VAC14-204ENST00000563662 ATP8A2Q9NTI2 1148 aa12.15□□□□□ -0.46
VAC14-204ENST00000563662 SRRDQ9UH36 339 aa12.15□□□□□ -0.46
VAC14-204ENST00000563662 NDUFB9Q9Y6M9 179 aa12.15□□□□□ -0.46
VAC14-204ENST00000563662 ZNF532Q9HCE3 1301 aa12.14□□□□□ -0.47
VAC14-204ENST00000563662 CASP8AP2Q9UKL3 1982 aa12.14□□□□□ -0.47
VAC14-204ENST00000563662 CYP2C8P10632 490 aa12.14□□□□□ -0.47
VAC14-204ENST00000563662 BCRP11274 1271 aa12.14□□□□□ -0.47
VAC14-204ENST00000563662 CAPN2P17655 700 aa12.14□□□□□ -0.47
VAC14-204ENST00000563662 USP14P54578 494 aa12.14□□□□□ -0.47
VAC14-204ENST00000563662 CERKLQ49MI3 558 aaPredicted RBP12.14□□□□□ -0.47
VAC14-204ENST00000563662 TATDN1Q6P1N9 297 aa12.14□□□□□ -0.47
VAC14-204ENST00000563662 ZNF579Q8NAF0 562 aaKnown RBP12.14□□□□□ -0.47
VAC14-204ENST00000563662 GTF3C2Q8WUA4 911 aaPredicted RBP12.14□□□□□ -0.47
VAC14-204ENST00000563662 TRIM47Q96LD4 638 aa12.14□□□□□ -0.47
VAC14-204ENST00000563662 MCM9Q9NXL9 1143 aa12.14□□□□□ -0.47
VAC14-204ENST00000563662 PCDHB8Q9UN66 801 aa12.14□□□□□ -0.47
VAC14-204ENST00000563662 PCDHB13Q9Y5F0 798 aa12.14□□□□□ -0.47
VAC14-204ENST00000563662 ERC2O15083 957 aa12.13□□□□□ -0.47
VAC14-204ENST00000563662 HOXA7P31268 230 aaPredicted RBP12.13□□□□□ -0.47
VAC14-204ENST00000563662 ADD2P35612 726 aa12.13□□□□□ -0.47
VAC14-204ENST00000563662 HMGCS2P54868 508 aa12.13□□□□□ -0.47
VAC14-204ENST00000563662 RRP1P56182 461 aaKnown RBP12.13□□□□□ -0.47
VAC14-204ENST00000563662 USP17L2Q6R6M4 530 aa12.13□□□□□ -0.47
VAC14-204ENST00000563662 COA7Q96BR5 231 aa12.13□□□□□ -0.47
VAC14-204ENST00000563662 SWAP70Q9UH65 585 aa12.13□□□□□ -0.47
VAC14-204ENST00000563662 ZBTB21Q9ULJ3 1066 aa12.13□□□□□ -0.47
VAC14-204ENST00000563662 PTCH2Q9Y6C5 1203 aa12.13□□□□□ -0.47
VAC14-204ENST00000563662 TCRBV5S4A2TA0A5A2 114 aa12.12□□□□□ -0.47
VAC14-204ENST00000563662 ZFYP08048 801 aaPredicted RBP12.12□□□□□ -0.47
VAC14-204ENST00000563662 SLURP2P0DP57 97 aa12.12□□□□□ -0.47
VAC14-204ENST00000563662 UBXN2AP68543 259 aa12.12□□□□□ -0.47
VAC14-204ENST00000563662 IRX3P78415 501 aaPredicted RBP12.12□□□□□ -0.47
VAC14-204ENST00000563662 FAM110CQ1W6H9 321 aa12.12□□□□□ -0.47
VAC14-204ENST00000563662 ABCB5Q2M3G0 1257 aa12.12□□□□□ -0.47
VAC14-204ENST00000563662 SLC4A8Q2Y0W8 1093 aa12.12□□□□□ -0.47
VAC14-204ENST00000563662 ZNF333Q96JL9 665 aa12.12□□□□□ -0.47
VAC14-204ENST00000563662 ADGRA2Q96PE1 1338 aa12.11□□□□□ -0.47
VAC14-204ENST00000563662 TNPO2O14787 897 aaKnown RBP12.11□□□□□ -0.47
VAC14-204ENST00000563662 GH2P01242 217 aa12.11□□□□□ -0.47
VAC14-204ENST00000563662 MTMR2Q13614 643 aa12.11□□□□□ -0.47
VAC14-204ENST00000563662 RRP1BQ14684 758 aaKnown RBP12.11□□□□□ -0.47
VAC14-204ENST00000563662 SLAIN1Q8ND83 568 aa12.11□□□□□ -0.47
VAC14-204ENST00000563662 NKX2-3Q8TAU0 364 aa12.11□□□□□ -0.47
VAC14-204ENST00000563662 DNAJC18Q9H819 358 aa12.11□□□□□ -0.47
VAC14-204ENST00000563662 BIN2Q9UBW5 565 aaPredicted RBP12.11□□□□□ -0.47
VAC14-204ENST00000563662 TTC41PQ6P2S7 1318 aa12.11□□□□□ -0.47
VAC14-204ENST00000563662 MYPNQ86TC9 1320 aa12.11□□□□□ -0.47
VAC14-204ENST00000563662 SMARCA5O60264 1052 aaPredicted RBP12.1□□□□□ -0.47
VAC14-204ENST00000563662 GLRX3O76003 335 aaKnown RBP12.1□□□□□ -0.47
VAC14-204ENST00000563662 GDF11O95390 407 aa12.1□□□□□ -0.47
VAC14-204ENST00000563662 GRK4P32298 578 aa12.1□□□□□ -0.47
VAC14-204ENST00000563662 PLCD1P51178 756 aa12.1□□□□□ -0.47
VAC14-204ENST00000563662 RAB3GAP1Q15042 981 aa12.1□□□□□ -0.47
VAC14-204ENST00000563662 TREML2Q5T2D2 321 aa12.1□□□□□ -0.47
VAC14-204ENST00000563662 ZNF467Q7Z7K2 595 aaPredicted RBP12.1□□□□□ -0.47
VAC14-204ENST00000563662 CCDC84Q86UT8 332 aaPredicted RBP12.1□□□□□ -0.47
VAC14-204ENST00000563662 CCAR1Q8IX12 1150 aaKnown RBP12.1□□□□□ -0.47
VAC14-204ENST00000563662 ANKRD13CQ8N6S4 541 aa12.1□□□□□ -0.47
VAC14-204ENST00000563662 PXYLP1Q8TE99 480 aa12.1□□□□□ -0.47
VAC14-204ENST00000563662 GCC1Q96CN9 775 aa12.1□□□□□ -0.47
VAC14-204ENST00000563662 CCDC17Q96LX7 622 aa12.1□□□□□ -0.47
VAC14-204ENST00000563662 FEZ1Q99689 392 aa12.1□□□□□ -0.47
VAC14-204ENST00000563662 ARHGAP39Q9C0H5 1083 aa12.1□□□□□ -0.47
VAC14-204ENST00000563662 ASCC2Q9H1I8 757 aaPredicted RBP12.1□□□□□ -0.47
VAC14-204ENST00000563662 ARMT1Q9H993 441 aa12.1□□□□□ -0.47
VAC14-204ENST00000563662 DCP1AQ9NPI6 582 aaPredicted RBP12.1□□□□□ -0.47
VAC14-204ENST00000563662 USP17L15C9J2P7 530 aa12.09□□□□□ -0.47
VAC14-204ENST00000563662 USP17L13C9JLJ4 530 aa12.09□□□□□ -0.47
VAC14-204ENST00000563662 USP17L11C9JVI0 530 aa12.09□□□□□ -0.47
VAC14-204ENST00000563662 USP17L18D6R9N7 530 aa12.09□□□□□ -0.47
VAC14-204ENST00000563662 USP17L22D6RA61 530 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms