RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 FLRT1Q9NZU1 646 aa9.7□□□□□ -0.86
HERPUD1-206ENST00000563343 MYO5AQ9Y4I1 1855 aaKnown RBP9.7□□□□□ -0.86
HERPUD1-206ENST00000563343 DNM1LO00429 736 aa9.69□□□□□ -0.86
HERPUD1-206ENST00000563343 MAPK4P31152 587 aa9.69□□□□□ -0.86
HERPUD1-206ENST00000563343 RGS2P41220 211 aa9.69□□□□□ -0.86
HERPUD1-206ENST00000563343 HERVK_113P62684 666 aa9.69□□□□□ -0.86
HERPUD1-206ENST00000563343 MAP3K12Q12852 859 aa9.69□□□□□ -0.86
HERPUD1-206ENST00000563343 SNX17Q15036 470 aa9.69□□□□□ -0.86
HERPUD1-206ENST00000563343 GPRC5AQ8NFJ5 357 aa9.69□□□□□ -0.86
HERPUD1-206ENST00000563343 ZNF384Q8TF68 577 aa9.69□□□□□ -0.86
HERPUD1-206ENST00000563343 LPIN2Q92539 896 aa9.69□□□□□ -0.86
HERPUD1-206ENST00000563343 LPAR1Q92633 364 aa9.69□□□□□ -0.86
HERPUD1-206ENST00000563343 SYNGAP1Q96PV0 1343 aa9.69□□□□□ -0.86
HERPUD1-206ENST00000563343 APBA2Q99767 749 aa9.69□□□□□ -0.86
HERPUD1-206ENST00000563343 SRCIN1Q9C0H9 1055 aa9.69□□□□□ -0.86
HERPUD1-206ENST00000563343 DDX20Q9UHI6 824 aaKnown RBP9.69□□□□□ -0.86
HERPUD1-206ENST00000563343 CHD7Q9P2D1 2997 aa9.69□□□□□ -0.86
HERPUD1-206ENST00000563343 A0A0G2JMZ2 1700 aa9.68□□□□□ -0.86
HERPUD1-206ENST00000563343 USP17L5A8MUK1 530 aa9.68□□□□□ -0.86
HERPUD1-206ENST00000563343 PRR29P0C7W0 189 aa9.68□□□□□ -0.86
HERPUD1-206ENST00000563343 SLC5A1P13866 664 aa9.68□□□□□ -0.86
HERPUD1-206ENST00000563343 ZEB1P37275 1124 aaPredicted RBP9.68□□□□□ -0.86
HERPUD1-206ENST00000563343 EPHB4P54760 987 aa9.68□□□□□ -0.86
HERPUD1-206ENST00000563343 ERVK-9P63128 1117 aa9.68□□□□□ -0.86
HERPUD1-206ENST00000563343 ERVK-24P63145 666 aa9.68□□□□□ -0.86
HERPUD1-206ENST00000563343 EXOSC9Q06265 439 aaKnown RBP9.68□□□□□ -0.86
HERPUD1-206ENST00000563343 PICALMQ13492 652 aa9.68□□□□□ -0.86
HERPUD1-206ENST00000563343 SLC39A5Q6ZMH5 540 aa9.68□□□□□ -0.86
HERPUD1-206ENST00000563343 ATG9AQ7Z3C6 839 aa9.68□□□□□ -0.86
HERPUD1-206ENST00000563343 SH3RF1Q7Z6J0 888 aa9.68□□□□□ -0.86
HERPUD1-206ENST00000563343 TRPV1Q8NER1 839 aa9.68□□□□□ -0.86
HERPUD1-206ENST00000563343 WDR18Q9BV38 432 aa9.68□□□□□ -0.86
HERPUD1-206ENST00000563343 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.68□□□□□ -0.864e-7■□□□□ 11
HERPUD1-206ENST00000563343 PDLIM7Q9NR12 457 aa9.68□□□□□ -0.86
HERPUD1-206ENST00000563343 PRKAG2Q9UGJ0 569 aa9.68□□□□□ -0.86
HERPUD1-206ENST00000563343 PARP14Q460N5 1801 aa9.68□□□□□ -0.86
HERPUD1-206ENST00000563343 XIRP2A4UGR9 3374 aa9.67□□□□□ -0.86
HERPUD1-206ENST00000563343 MROH7-TTC4A0A0A0MT08 1334 aa9.67□□□□□ -0.86
HERPUD1-206ENST00000563343 TRIM43BA6NCK2 446 aa9.67□□□□□ -0.86
HERPUD1-206ENST00000563343 EYA2O00167 538 aa9.67□□□□□ -0.86
HERPUD1-206ENST00000563343 ITGB8P26012 769 aa9.67□□□□□ -0.86
HERPUD1-206ENST00000563343 BTDP43251 543 aa9.67□□□□□ -0.86
HERPUD1-206ENST00000563343 PHKA1P46020 1223 aa9.67□□□□□ -0.86
HERPUD1-206ENST00000563343 FXR2P51116 673 aaKnown RBP eCLIP9.67□□□□□ -0.86
HERPUD1-206ENST00000563343 BACE1P56817 501 aa9.67□□□□□ -0.86
HERPUD1-206ENST00000563343 IRX3P78415 501 aaPredicted RBP9.67□□□□□ -0.86
HERPUD1-206ENST00000563343 JAG1P78504 1218 aa9.67□□□□□ -0.86
HERPUD1-206ENST00000563343 MAP2K5Q13163 448 aa9.67□□□□□ -0.86
HERPUD1-206ENST00000563343 PDE3AQ14432 1141 aa9.67□□□□□ -0.86
HERPUD1-206ENST00000563343 PLEKHH3Q7Z736 793 aa9.67□□□□□ -0.86
HERPUD1-206ENST00000563343 ADAMTS19Q8TE59 1207 aa9.67□□□□□ -0.86
HERPUD1-206ENST00000563343 ATXN2LQ8WWM7 1075 aaKnown RBP9.67□□□□□ -0.86
HERPUD1-206ENST00000563343 TRIM43Q96BQ3 446 aaPredicted RBP9.67□□□□□ -0.86
HERPUD1-206ENST00000563343 ASB2Q96Q27 587 aa9.67□□□□□ -0.86
HERPUD1-206ENST00000563343 PRKRIP1Q9H875 184 aaPredicted RBP9.67□□□□□ -0.86
HERPUD1-206ENST00000563343 ATP11BQ9Y2G3 1177 aa9.67□□□□□ -0.86
HERPUD1-206ENST00000563343 TRANK1O15050 2925 aa9.67□□□□□ -0.86
HERPUD1-206ENST00000563343 MYH1P12882 1939 aa9.66□□□□□ -0.86
HERPUD1-206ENST00000563343 GPR75-ASB3A0A0A6YYF3 556 aa9.66□□□□□ -0.86
HERPUD1-206ENST00000563343 SEMA3EO15041 775 aa9.66□□□□□ -0.86
HERPUD1-206ENST00000563343 MSCO60682 206 aa9.66□□□□□ -0.86
HERPUD1-206ENST00000563343 CNMDO75829 334 aa9.66□□□□□ -0.86
HERPUD1-206ENST00000563343 HOXC6P09630 235 aa9.66□□□□□ -0.86
HERPUD1-206ENST00000563343 DNAJB2P25686 324 aa9.66□□□□□ -0.86
HERPUD1-206ENST00000563343 MTMR2Q13614 643 aa9.66□□□□□ -0.86
HERPUD1-206ENST00000563343 TRIM60Q495X7 471 aa9.66□□□□□ -0.86
HERPUD1-206ENST00000563343 SLC4A10Q6U841 1118 aa9.66□□□□□ -0.86
HERPUD1-206ENST00000563343 NPLOC4Q8TAT6 608 aa9.66□□□□□ -0.86
HERPUD1-206ENST00000563343 EDC3Q96F86 508 aaKnown RBP9.66□□□□□ -0.86
HERPUD1-206ENST00000563343 DENND2AQ9ULE3 1009 aa9.66□□□□□ -0.86
HERPUD1-206ENST00000563343 ARIH1Q9Y4X5 557 aaPredicted RBP9.66□□□□□ -0.86
HERPUD1-206ENST00000563343 PDS5AQ29RF7 1337 aaKnown RBP9.65□□□□□ -0.86
HERPUD1-206ENST00000563343 CYBAP13498 195 aa9.65□□□□□ -0.86
HERPUD1-206ENST00000563343 DDX10Q13206 875 aaKnown RBP9.65□□□□□ -0.86
HERPUD1-206ENST00000563343 SHROOM1Q2M3G4 852 aaPredicted RBP9.65□□□□□ -0.86
HERPUD1-206ENST00000563343 GJC2Q5T442 439 aaPredicted RBP9.65□□□□□ -0.86
HERPUD1-206ENST00000563343 C1orf53Q5VUE5 145 aa9.65□□□□□ -0.86
HERPUD1-206ENST00000563343 PIP4P2Q8N4L2 257 aa9.65□□□□□ -0.86
HERPUD1-206ENST00000563343 AS3MTQ9HBK9 375 aa9.65□□□□□ -0.86
HERPUD1-206ENST00000563343 PRDM5Q9NQX1 630 aaPredicted RBP9.65□□□□□ -0.86
HERPUD1-206ENST00000563343 PTPREP23469 700 aa9.64□□□□□ -0.87
HERPUD1-206ENST00000563343 CYP2C19P33261 490 aa9.64□□□□□ -0.87
HERPUD1-206ENST00000563343 RASGRF1Q13972 1273 aa9.64□□□□□ -0.87
HERPUD1-206ENST00000563343 ATP2B3Q16720 1220 aa9.64□□□□□ -0.87
HERPUD1-206ENST00000563343 AKNAD1Q5T1N1 836 aa9.64□□□□□ -0.87
HERPUD1-206ENST00000563343 MFSD14CQ5VZR4 134 aa9.64□□□□□ -0.87
HERPUD1-206ENST00000563343 DZIP1Q86YF9 867 aaKnown RBP9.64□□□□□ -0.87
HERPUD1-206ENST00000563343 ZGPATQ8N5A5 531 aaKnown RBP9.64□□□□□ -0.87
HERPUD1-206ENST00000563343 RNPC3Q96LT9 517 aaKnown RBP9.64□□□□□ -0.87
HERPUD1-206ENST00000563343 UHRF1Q96T88 793 aaPredicted RBP9.64□□□□□ -0.87
HERPUD1-206ENST00000563343 PAGR1Q9BTK6 254 aa9.64□□□□□ -0.87
HERPUD1-206ENST00000563343 ZNF576Q9H609 170 aa9.64□□□□□ -0.87
HERPUD1-206ENST00000563343 DNAJC18Q9H819 358 aa9.64□□□□□ -0.87
HERPUD1-206ENST00000563343 THEGQ9P2T0 379 aa9.64□□□□□ -0.87
HERPUD1-206ENST00000563343 COL11A1P12107 1806 aaPredicted RBP9.63□□□□□ -0.87
HERPUD1-206ENST00000563343 LRRC37A2A6NM11 1700 aa9.63□□□□□ -0.87
HERPUD1-206ENST00000563343 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.63□□□□□ -0.87
HERPUD1-206ENST00000563343 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.63□□□□□ -0.87
HERPUD1-206ENST00000563343 SLC15A5A6NIM6 579 aa9.63□□□□□ -0.87
HERPUD1-206ENST00000563343 C19orf81C9J6K1 198 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms