RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 POLR3DP05423 398 aaPredicted RBP14.74□□□□□ -0.05
NSMCE1-204ENST00000563273 HOXA7P31268 230 aaPredicted RBP14.74□□□□□ -0.05
NSMCE1-204ENST00000563273 PSMC4P43686 418 aa14.74□□□□□ -0.05
NSMCE1-204ENST00000563273 PLCD1P51178 756 aa14.74□□□□□ -0.05
NSMCE1-204ENST00000563273 HMGCS2P54868 508 aa14.74□□□□□ -0.05
NSMCE1-204ENST00000563273 SOX10P56693 466 aa14.74□□□□□ -0.05
NSMCE1-204ENST00000563273 FAM110CQ1W6H9 321 aa14.74□□□□□ -0.05
NSMCE1-204ENST00000563273 TREML2Q5T2D2 321 aa14.74□□□□□ -0.05
NSMCE1-204ENST00000563273 NBPF11Q86T75 865 aa14.74□□□□□ -0.05
NSMCE1-204ENST00000563273 SMCR8Q8TEV9 937 aaPredicted RBP14.74□□□□□ -0.05
NSMCE1-204ENST00000563273 GCC1Q96CN9 775 aa14.74□□□□□ -0.05
NSMCE1-204ENST00000563273 TRIM47Q96LD4 638 aa14.74□□□□□ -0.05
NSMCE1-204ENST00000563273 ARHGAP39Q9C0H5 1083 aa14.74□□□□□ -0.05
NSMCE1-204ENST00000563273 MCM9Q9NXL9 1143 aa14.74□□□□□ -0.05
NSMCE1-204ENST00000563273 SRRDQ9UH36 339 aa14.74□□□□□ -0.05
NSMCE1-204ENST00000563273 MYO5AQ9Y4I1 1855 aaKnown RBP14.74□□□□□ -0.05
NSMCE1-204ENST00000563273 PHIPQ8WWQ0 1821 aa14.73□□□□□ -0.05
NSMCE1-204ENST00000563273 DDX60LQ5H9U9 1706 aaKnown RBP14.73□□□□□ -0.05
NSMCE1-204ENST00000563273 GDF11O95390 407 aa14.73□□□□□ -0.05
NSMCE1-204ENST00000563273 GH2P01242 217 aa14.73□□□□□ -0.05
NSMCE1-204ENST00000563273 ZFYP08048 801 aaPredicted RBP14.73□□□□□ -0.05
NSMCE1-204ENST00000563273 OSBPP22059 807 aa14.73□□□□□ -0.05
NSMCE1-204ENST00000563273 CTGFP29279 349 aa14.73□□□□□ -0.05
NSMCE1-204ENST00000563273 SHMT1P34896 483 aa14.73□□□□□ -0.05
NSMCE1-204ENST00000563273 FCGRTP55899 365 aa14.73□□□□□ -0.05
NSMCE1-204ENST00000563273 MTMR2Q13614 643 aa14.73□□□□□ -0.05
NSMCE1-204ENST00000563273 LRRFIP1Q32MZ4 808 aaKnown RBP14.73□□□□□ -0.05
NSMCE1-204ENST00000563273 CERKLQ49MI3 558 aaPredicted RBP14.73□□□□□ -0.05
NSMCE1-204ENST00000563273 ZNF333Q96JL9 665 aa14.73□□□□□ -0.05
NSMCE1-204ENST00000563273 C12orf42Q96LP6 360 aa14.73□□□□□ -0.05
NSMCE1-204ENST00000563273 BCL11AQ9H165 835 aa14.73□□□□□ -0.05
NSMCE1-204ENST00000563273 ARMT1Q9H993 441 aa14.73□□□□□ -0.05
NSMCE1-204ENST00000563273 TMOD4Q9NZQ9 345 aa14.73□□□□□ -0.05
NSMCE1-204ENST00000563273 SWAP70Q9UH65 585 aa14.73□□□□□ -0.05
NSMCE1-204ENST00000563273 PTCH2Q9Y6C5 1203 aa14.73□□□□□ -0.05
NSMCE1-204ENST00000563273 GLRX3O76003 335 aaKnown RBP14.72□□□□□ -0.05
NSMCE1-204ENST00000563273 ABCB5Q2M3G0 1257 aa14.72□□□□□ -0.05
NSMCE1-204ENST00000563273 SLC9C1Q4G0N8 1177 aa14.72□□□□□ -0.05
NSMCE1-204ENST00000563273 GIMAP6Q6P9H5 292 aa14.72□□□□□ -0.05
NSMCE1-204ENST00000563273 USP17L2Q6R6M4 530 aa14.72□□□□□ -0.05
NSMCE1-204ENST00000563273 GTF3C2Q8WUA4 911 aaPredicted RBP14.72□□□□□ -0.05
NSMCE1-204ENST00000563273 SDR42E1Q8WUS8 393 aa14.72□□□□□ -0.05
NSMCE1-204ENST00000563273 DDRGK1Q96HY6 314 aa14.72□□□□□ -0.05
NSMCE1-204ENST00000563273 KIAA1683Q9H0B3 1180 aa14.72□□□□□ -0.05
NSMCE1-204ENST00000563273 ASCC2Q9H1I8 757 aaPredicted RBP14.72□□□□□ -0.05
NSMCE1-204ENST00000563273 CABP5Q9NP86 173 aa14.72□□□□□ -0.05
NSMCE1-204ENST00000563273 CDK5RAP2Q96SN8 1893 aa14.72□□□□□ -0.05
NSMCE1-204ENST00000563273 SALL3Q9BXA9 1300 aa14.71□□□□□ -0.05
NSMCE1-204ENST00000563273 LOC285556D6RIA3 1793 aa14.71□□□□□ -0.05
NSMCE1-204ENST00000563273 FMNL1O95466 1100 aaPredicted RBP14.71□□□□□ -0.05
NSMCE1-204ENST00000563273 USP14P54578 494 aa14.71□□□□□ -0.05
NSMCE1-204ENST00000563273 SHROOM1Q2M3G4 852 aaPredicted RBP14.71□□□□□ -0.05
NSMCE1-204ENST00000563273 SLC4A8Q2Y0W8 1093 aa14.71□□□□□ -0.05
NSMCE1-204ENST00000563273 C12orf60Q5U649 245 aa14.71□□□□□ -0.05
NSMCE1-204ENST00000563273 AMOTL1Q8IY63 956 aa14.71□□□□□ -0.05
NSMCE1-204ENST00000563273 PI4K2BQ8TCG2 481 aa14.71□□□□□ -0.05
NSMCE1-204ENST00000563273 APPBP2Q92624 585 aa14.71□□□□□ -0.05
NSMCE1-204ENST00000563273 PUS7LQ9H0K6 701 aaKnown RBP14.71□□□□□ -0.05
NSMCE1-204ENST00000563273 MORF4L1Q9UBU8 362 aa14.71□□□□□ -0.05
NSMCE1-204ENST00000563273 RNF113AO15541 343 aaKnown RBP14.7□□□□□ -0.06
NSMCE1-204ENST00000563273 MX1P20591 662 aa14.7□□□□□ -0.06
NSMCE1-204ENST00000563273 IRX3P78415 501 aaPredicted RBP14.7□□□□□ -0.06
NSMCE1-204ENST00000563273 SLFNL1Q499Z3 407 aa14.7□□□□□ -0.06
NSMCE1-204ENST00000563273 TICAM2Q86XR7 235 aa14.7□□□□□ -0.06
NSMCE1-204ENST00000563273 CCDC17Q96LX7 622 aa14.7□□□□□ -0.06
NSMCE1-204ENST00000563273 PTPRFP10586 1907 aa14.7□□□□□ -0.06
NSMCE1-204ENST00000563273 MYPNQ86TC9 1320 aa14.69□□□□□ -0.06
NSMCE1-204ENST00000563273 PRKAB2O43741 272 aa14.69□□□□□ -0.06
NSMCE1-204ENST00000563273 GNAT2P19087 354 aa14.69□□□□□ -0.06
NSMCE1-204ENST00000563273 GUCY1A2P33402 732 aa14.69□□□□□ -0.06
NSMCE1-204ENST00000563273 IRF5Q13568 498 aa14.69□□□□□ -0.06
NSMCE1-204ENST00000563273 TSHZ3Q63HK5 1081 aa14.69□□□□□ -0.06
NSMCE1-204ENST00000563273 ANKRD13CQ8N6S4 541 aa14.69□□□□□ -0.06
NSMCE1-204ENST00000563273 STRBPQ96SI9 672 aaKnown RBP14.69□□□□□ -0.06
NSMCE1-204ENST00000563273 EMILIN3Q9NT22 766 aa14.69□□□□□ -0.06
NSMCE1-204ENST00000563273 ARPP21Q9UBL0 812 aaPredicted RBP14.69□□□□□ -0.06
NSMCE1-204ENST00000563273 ZBTB47Q9UFB7 747 aaPredicted RBP14.69□□□□□ -0.06
NSMCE1-204ENST00000563273 STAP2Q9UGK3 403 aa14.69□□□□□ -0.06
NSMCE1-204ENST00000563273 SLC4A4Q9Y6R1 1079 aa14.69□□□□□ -0.06
NSMCE1-204ENST00000563273 USP17L12C9JPN9 530 aa14.68□□□□□ -0.06
NSMCE1-204ENST00000563273 USP17L21D6R901 530 aa14.68□□□□□ -0.06
NSMCE1-204ENST00000563273 CHGBP05060 677 aa14.68□□□□□ -0.06
NSMCE1-204ENST00000563273 RAB3GAP1Q15042 981 aa14.68□□□□□ -0.06
NSMCE1-204ENST00000563273 SBK1Q52WX2 424 aa14.68□□□□□ -0.06
NSMCE1-204ENST00000563273 TMEM179Q6ZVK1 233 aa14.68□□□□□ -0.06
NSMCE1-204ENST00000563273 C16orf86Q6ZW13 317 aa14.68□□□□□ -0.06
NSMCE1-204ENST00000563273 SLAIN1Q8ND83 568 aa14.68□□□□□ -0.06
NSMCE1-204ENST00000563273 RAET1EQ8TD07 263 aa14.68□□□□□ -0.06
NSMCE1-204ENST00000563273 OSBP2Q969R2 916 aa14.68□□□□□ -0.06
NSMCE1-204ENST00000563273 TMEM106CQ9BVX2 250 aa14.68□□□□□ -0.06
NSMCE1-204ENST00000563273 CENPFP49454 3210 aa14.68□□□□□ -0.06
NSMCE1-204ENST00000563273 ATAD5Q96QE3 1844 aa14.67□□□□□ -0.06
NSMCE1-204ENST00000563273 TNPO2O14787 897 aaKnown RBP14.67□□□□□ -0.06
NSMCE1-204ENST00000563273 CYP2D6P10635 497 aa14.67□□□□□ -0.06
NSMCE1-204ENST00000563273 GRK4P32298 578 aa14.67□□□□□ -0.06
NSMCE1-204ENST00000563273 HERVK_113P62684 666 aa14.67□□□□□ -0.06
NSMCE1-204ENST00000563273 PRKCZQ05513 592 aa14.67□□□□□ -0.06
NSMCE1-204ENST00000563273 ANKRD45Q5TZF3 282 aa14.67□□□□□ -0.06
NSMCE1-204ENST00000563273 CTR9Q6PD62 1173 aa14.67□□□□□ -0.06
NSMCE1-204ENST00000563273 LBX2Q6XYB7 198 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms