RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 GABRQQ9UN88 632 aa19.12■□□□□ 0.65
SF3B3-203ENST00000562874 ZNF532Q9HCE3 1301 aa19.11■□□□□ 0.65
SF3B3-203ENST00000562874 IGSF3O75054 1194 aa19.11■□□□□ 0.65
SF3B3-203ENST00000562874 RAB11FIP3O75154 756 aa19.11■□□□□ 0.65
SF3B3-203ENST00000562874 ASNSP08243 561 aa19.11■□□□□ 0.65
SF3B3-203ENST00000562874 EVX2Q03828 476 aa19.11■□□□□ 0.65
SF3B3-203ENST00000562874 PDE3AQ14432 1141 aa19.11■□□□□ 0.65
SF3B3-203ENST00000562874 BOLA2Q9H3K6 86 aa19.11■□□□□ 0.65
SF3B3-203ENST00000562874 PNMA3Q9UL41 463 aa19.11■□□□□ 0.65
SF3B3-203ENST00000562874 MYH4Q9Y623 1939 aa19.1■□□□□ 0.65
SF3B3-203ENST00000562874 MAGEB6P1A0A0J9YX57 407 aa19.1■□□□□ 0.65
SF3B3-203ENST00000562874 PRMT2P55345 433 aa19.1■□□□□ 0.65
SF3B3-203ENST00000562874 TTF1Q15361 905 aaPredicted RBP19.1■□□□□ 0.65
SF3B3-203ENST00000562874 MTFR1Q15390 333 aa19.1■□□□□ 0.65
SF3B3-203ENST00000562874 SLC9C2Q5TAH2 1124 aa19.1■□□□□ 0.65
SF3B3-203ENST00000562874 METTL16Q86W50 562 aaKnown RBP19.1■□□□□ 0.65
SF3B3-203ENST00000562874 TBC1D2Q9BYX2 928 aa19.1■□□□□ 0.65
SF3B3-203ENST00000562874 CHMP4BQ9H444 224 aaKnown RBP19.1■□□□□ 0.65
SF3B3-203ENST00000562874 RLFQ13129 1914 aa19.1■□□□□ 0.65
SF3B3-203ENST00000562874 A0A0G2JMZ2 1700 aa19.09■□□□□ 0.65
SF3B3-203ENST00000562874 CHGBP05060 677 aa19.09■□□□□ 0.65
SF3B3-203ENST00000562874 FOXP4Q8IVH2 680 aaPredicted RBP19.09■□□□□ 0.65
SF3B3-203ENST00000562874 LCORLQ8N3X6 602 aa19.09■□□□□ 0.65
SF3B3-203ENST00000562874 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.09■□□□□ 0.65
SF3B3-203ENST00000562874 SDR42E1Q8WUS8 393 aa19.09■□□□□ 0.65
SF3B3-203ENST00000562874 PAG1Q9NWQ8 432 aa19.09■□□□□ 0.65
SF3B3-203ENST00000562874 TCRBV5S4A2TA0A5A2 114 aa19.08■□□□□ 0.64
SF3B3-203ENST00000562874 TNPO2O14787 897 aaKnown RBP19.08■□□□□ 0.64
SF3B3-203ENST00000562874 PEX10O60683 326 aa19.08■□□□□ 0.64
SF3B3-203ENST00000562874 GH2P01242 217 aa19.08■□□□□ 0.64
SF3B3-203ENST00000562874 HOXD10P28358 340 aa19.08■□□□□ 0.64
SF3B3-203ENST00000562874 GRK4P32298 578 aa19.08■□□□□ 0.64
SF3B3-203ENST00000562874 ZYXQ15942 572 aaKnown RBP19.08■□□□□ 0.64
SF3B3-203ENST00000562874 SH3D19Q5HYK7 790 aa19.08■□□□□ 0.64
SF3B3-203ENST00000562874 CERS3Q8IU89 383 aa19.08■□□□□ 0.64
SF3B3-203ENST00000562874 WDR18Q9BV38 432 aa19.08■□□□□ 0.64
SF3B3-203ENST00000562874 ASCC2Q9H1I8 757 aaPredicted RBP19.08■□□□□ 0.64
SF3B3-203ENST00000562874 TAOK2Q9UL54 1235 aa19.08■□□□□ 0.64
SF3B3-203ENST00000562874 GREB1LQ9C091 1923 aaPredicted RBP19.08■□□□□ 0.64
SF3B3-203ENST00000562874 PLCD1P51178 756 aa19.07■□□□□ 0.64
SF3B3-203ENST00000562874 BACE1P56817 501 aa19.07■□□□□ 0.64
SF3B3-203ENST00000562874 PRPF38BQ5VTL8 546 aaKnown RBP19.07■□□□□ 0.64
SF3B3-203ENST00000562874 LRRCC1Q9C099 1032 aa19.07■□□□□ 0.64
SF3B3-203ENST00000562874 ARMT1Q9H993 441 aa19.07■□□□□ 0.64
SF3B3-203ENST00000562874 TMOD4Q9NZQ9 345 aa19.07■□□□□ 0.64
SF3B3-203ENST00000562874 SERPINB13Q9UIV8 391 aa19.07■□□□□ 0.64
SF3B3-203ENST00000562874 ELNP15502 786 aa19.06■□□□□ 0.64
SF3B3-203ENST00000562874 FLT3LGP49771 235 aa19.06■□□□□ 0.64
SF3B3-203ENST00000562874 PABPC4Q13310 644 aaKnown RBP eCLIP19.06■□□□□ 0.64
SF3B3-203ENST00000562874 FAM110CQ1W6H9 321 aa19.06■□□□□ 0.64
SF3B3-203ENST00000562874 CRNKL1Q9BZJ0 848 aaKnown RBP19.06■□□□□ 0.64
SF3B3-203ENST00000562874 EHD4Q9H223 541 aa19.06■□□□□ 0.64
SF3B3-203ENST00000562874 USP17L10C9JJH3 530 aa19.05■□□□□ 0.64
SF3B3-203ENST00000562874 MBD4O95243 580 aa19.05■□□□□ 0.64
SF3B3-203ENST00000562874 POLR3DP05423 398 aaPredicted RBP19.05■□□□□ 0.64
SF3B3-203ENST00000562874 CYP2D6P10635 497 aa19.05■□□□□ 0.64
SF3B3-203ENST00000562874 ATP5JP18859 108 aa19.05■□□□□ 0.64
SF3B3-203ENST00000562874 SHMT1P34896 483 aa19.05■□□□□ 0.64
SF3B3-203ENST00000562874 ADD2P35612 726 aa19.05■□□□□ 0.64
SF3B3-203ENST00000562874 IRX3P78415 501 aaPredicted RBP19.05■□□□□ 0.64
SF3B3-203ENST00000562874 RAB3GAP1Q15042 981 aa19.05■□□□□ 0.64
SF3B3-203ENST00000562874 TTC6Q86TZ1 520 aa19.05■□□□□ 0.64
SF3B3-203ENST00000562874 SHISA4Q96DD7 197 aa19.05■□□□□ 0.64
SF3B3-203ENST00000562874 MCM9Q9NXL9 1143 aa19.05■□□□□ 0.64
SF3B3-203ENST00000562874 BIN2Q9UBW5 565 aaPredicted RBP19.05■□□□□ 0.64
SF3B3-203ENST00000562874 ZNFX1Q9P2E3 1918 aaKnown RBP19.05■□□□□ 0.64
SF3B3-203ENST00000562874 TSHZ3Q63HK5 1081 aa19.04■□□□□ 0.64
SF3B3-203ENST00000562874 TATDN1Q6P1N9 297 aa19.04■□□□□ 0.64
SF3B3-203ENST00000562874 FEZ1Q99689 392 aa19.04■□□□□ 0.64
SF3B3-203ENST00000562874 HAUS7Q99871 368 aa19.04■□□□□ 0.64
SF3B3-203ENST00000562874 PRKAB2O43741 272 aa19.03■□□□□ 0.64
SF3B3-203ENST00000562874 ADCY3O60266 1144 aa19.03■□□□□ 0.64
SF3B3-203ENST00000562874 CCL5P13501 91 aa19.03■□□□□ 0.64
SF3B3-203ENST00000562874 GCLCP48506 637 aaPredicted RBP19.03■□□□□ 0.64
SF3B3-203ENST00000562874 ABCB5Q2M3G0 1257 aa19.03■□□□□ 0.64
SF3B3-203ENST00000562874 CERKLQ49MI3 558 aaPredicted RBP19.03■□□□□ 0.64
SF3B3-203ENST00000562874 TMED8Q6PL24 325 aaPredicted RBP19.03■□□□□ 0.64
SF3B3-203ENST00000562874 SLC44A5Q8NCS7 719 aa19.03■□□□□ 0.64
SF3B3-203ENST00000562874 SLAIN1Q8ND83 568 aa19.03■□□□□ 0.64
SF3B3-203ENST00000562874 DCP1AQ9NPI6 582 aaPredicted RBP19.03■□□□□ 0.64
SF3B3-203ENST00000562874 EMILIN3Q9NT22 766 aa19.03■□□□□ 0.64
SF3B3-203ENST00000562874 GINM1Q9NU53 330 aa19.03■□□□□ 0.64
SF3B3-203ENST00000562874 SMIM22K7EJ46 135 aa19.02■□□□□ 0.64
SF3B3-203ENST00000562874 COA7Q96BR5 231 aa19.02■□□□□ 0.64
SF3B3-203ENST00000562874 YTHDC1Q96MU7 727 aaKnown RBP19.02■□□□□ 0.64
SF3B3-203ENST00000562874 UNC93B1Q9H1C4 597 aa19.02■□□□□ 0.64
SF3B3-203ENST00000562874 TXNRD2Q9NNW7 524 aa19.02■□□□□ 0.64
SF3B3-203ENST00000562874 PLXNA1Q9UIW2 1896 aa19.02■□□□□ 0.64
SF3B3-203ENST00000562874 C19orf81C9J6K1 198 aa19.01■□□□□ 0.63
SF3B3-203ENST00000562874 INHAP05111 366 aa19.01■□□□□ 0.63
SF3B3-203ENST00000562874 HERVK_113P62684 666 aa19.01■□□□□ 0.63
SF3B3-203ENST00000562874 UBXN2AP68543 259 aa19.01■□□□□ 0.63
SF3B3-203ENST00000562874 GABPAQ06546 454 aa19.01■□□□□ 0.63
SF3B3-203ENST00000562874 USP17L2Q6R6M4 530 aa19.01■□□□□ 0.63
SF3B3-203ENST00000562874 ACER1Q8TDN7 264 aa19.01■□□□□ 0.63
SF3B3-203ENST00000562874 P2RX7Q99572 595 aaKnown RBP19.01■□□□□ 0.63
SF3B3-203ENST00000562874 PAGR1Q9BTK6 254 aa19.01■□□□□ 0.63
SF3B3-203ENST00000562874 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.01■□□□□ 0.63
SF3B3-203ENST00000562874 RNF208Q9H0X6 261 aa19.01■□□□□ 0.63
SF3B3-203ENST00000562874 CYP2D7A0A087X1C5 515 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms