RNA–Protein interactions for RNA: ENST00000562570.1

AC009041.2-203, humanhuman

TSL 1 (best)

Gene AC009041.2, Length 3,222 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-203ENST00000562570 ERVV-1B6SEH8 477 aa20.31■□□□□ 0.84
AC009041.2-203ENST00000562570 YEATS4O95619 227 aa20.31■□□□□ 0.84
AC009041.2-203ENST00000562570 CMA1P23946 247 aa20.31■□□□□ 0.84
AC009041.2-203ENST00000562570 RFC4P35249 363 aa20.31■□□□□ 0.84
AC009041.2-203ENST00000562570 TAF1P21675 1872 aa20.31■□□□□ 0.84
AC009041.2-203ENST00000562570 HIBADHP31937 336 aaKnown RBP20.31■□□□□ 0.84
AC009041.2-203ENST00000562570 ARMCX5Q6P1M9 558 aa20.31■□□□□ 0.84
AC009041.2-203ENST00000562570 CRACR2BQ8N4Y2 399 aaPredicted RBP20.31■□□□□ 0.84
AC009041.2-203ENST00000562570 ZNF384Q8TF68 577 aa20.31■□□□□ 0.84
AC009041.2-203ENST00000562570 SPATA31A1Q5TZJ5 1347 aa20.31■□□□□ 0.84
AC009041.2-203ENST00000562570 FMR1Q06787 632 aaKnown RBP eCLIP20.31■□□□□ 0.84
AC009041.2-203ENST00000562570 PP2D1A8MPX8 630 aa20.3■□□□□ 0.84
AC009041.2-203ENST00000562570 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.3■□□□□ 0.84
AC009041.2-203ENST00000562570 USP54Q70EL1 1684 aa20.3■□□□□ 0.84
AC009041.2-203ENST00000562570 TFAP4Q01664 338 aa20.3■□□□□ 0.84
AC009041.2-203ENST00000562570 STAG2Q8N3U4 1231 aa20.3■□□□□ 0.84
AC009041.2-203ENST00000562570 C6orf229H3BNL8 230 aa20.29■□□□□ 0.84
AC009041.2-203ENST00000562570 MMP1P03956 469 aa20.29■□□□□ 0.84
AC009041.2-203ENST00000562570 TOP1P11387 765 aaKnown RBP20.29■□□□□ 0.84
AC009041.2-203ENST00000562570 BMP6P22004 513 aa20.29■□□□□ 0.84
AC009041.2-203ENST00000562570 NLRP12P59046 1061 aa20.29■□□□□ 0.84
AC009041.2-203ENST00000562570 ZSCAN10Q96SZ4 725 aaPredicted RBP20.29■□□□□ 0.84
AC009041.2-203ENST00000562570 SIPA1L3O60292 1781 aaPredicted RBP20.29■□□□□ 0.84
AC009041.2-203ENST00000562570 HEATR3Q7Z4Q2 680 aa20.29■□□□□ 0.84
AC009041.2-203ENST00000562570 CTCFLQ8NI51 663 aaPredicted RBP20.29■□□□□ 0.84
AC009041.2-203ENST00000562570 IRX2Q9BZI1 471 aaPredicted RBP20.29■□□□□ 0.84
AC009041.2-203ENST00000562570 URI1O94763 535 aaPredicted RBP20.29■□□□□ 0.84
AC009041.2-203ENST00000562570 PDIA4P13667 645 aaKnown RBP20.29■□□□□ 0.84
AC009041.2-203ENST00000562570 ELF2Q15723 593 aa20.29■□□□□ 0.84
AC009041.2-203ENST00000562570 RBM43Q6ZSC3 357 aaKnown RBP20.29■□□□□ 0.84
AC009041.2-203ENST00000562570 PTPAQ15257 358 aa20.28■□□□□ 0.84
AC009041.2-203ENST00000562570 CTR9Q6PD62 1173 aa20.28■□□□□ 0.84
AC009041.2-203ENST00000562570 KRBA2Q6ZNG9 492 aa20.28■□□□□ 0.84
AC009041.2-203ENST00000562570 CNNM2Q9H8M5 875 aa20.28■□□□□ 0.84
AC009041.2-203ENST00000562570 FAM196AQ6ZSG2 479 aa20.28■□□□□ 0.84
AC009041.2-203ENST00000562570 SMARCE1Q969G3 411 aa20.28■□□□□ 0.84
AC009041.2-203ENST00000562570 SHISA4Q96DD7 197 aa20.28■□□□□ 0.84
AC009041.2-203ENST00000562570 ABCC12Q96J65 1359 aa20.28■□□□□ 0.84
AC009041.2-203ENST00000562570 HINFPQ9BQA5 517 aa20.27■□□□□ 0.84
AC009041.2-203ENST00000562570 MXD3Q9BW11 206 aa20.27■□□□□ 0.84
AC009041.2-203ENST00000562570 LZTFL1Q9NQ48 299 aa20.27■□□□□ 0.84
AC009041.2-203ENST00000562570 FMNL1O95466 1100 aaPredicted RBP20.27■□□□□ 0.84
AC009041.2-203ENST00000562570 ARHGEF1Q92888 912 aaKnown RBP20.27■□□□□ 0.84
AC009041.2-203ENST00000562570 A0A087X0B3 334 aa20.27■□□□□ 0.83
AC009041.2-203ENST00000562570 PTGDRQ13258 359 aa20.27■□□□□ 0.83
AC009041.2-203ENST00000562570 POSTNQ15063 836 aa20.27■□□□□ 0.83
AC009041.2-203ENST00000562570 PARP10Q53GL7 1025 aa20.27■□□□□ 0.83
AC009041.2-203ENST00000562570 SYMPKQ92797 1274 aaKnown RBP20.27■□□□□ 0.83
AC009041.2-203ENST00000562570 SPTLC3Q9NUV7 552 aa20.27■□□□□ 0.83
AC009041.2-203ENST00000562570 FBXO3Q9UK99 471 aa20.27■□□□□ 0.83
AC009041.2-203ENST00000562570 MTF1Q14872 753 aa20.26■□□□□ 0.83
AC009041.2-203ENST00000562570 MAP3K14Q99558 947 aa20.26■□□□□ 0.83
AC009041.2-203ENST00000562570 UBA5Q9GZZ9 404 aa20.26■□□□□ 0.83
AC009041.2-203ENST00000562570 RTCBQ9Y3I0 505 aaKnown RBP20.26■□□□□ 0.83
AC009041.2-203ENST00000562570 TRIM75PA6NK02 468 aa20.26■□□□□ 0.83
AC009041.2-203ENST00000562570 CCZ1BP86790 482 aa20.26■□□□□ 0.83
AC009041.2-203ENST00000562570 CCZ1P86791 482 aaPredicted RBP20.26■□□□□ 0.83
AC009041.2-203ENST00000562570 PRIMPOLQ96LW4 560 aa20.26■□□□□ 0.83
AC009041.2-203ENST00000562570 RNF41Q9H4P4 317 aaPredicted RBP20.26■□□□□ 0.83
AC009041.2-203ENST00000562570 RNF216Q9NWF9 866 aaPredicted RBP20.26■□□□□ 0.83
AC009041.2-203ENST00000562570 PHLPP1O60346 1717 aa20.26■□□□□ 0.83
AC009041.2-203ENST00000562570 A0A0U1RQJ8 604 aa20.25■□□□□ 0.83
AC009041.2-203ENST00000562570 DEXIO95424 95 aa20.25■□□□□ 0.83
AC009041.2-203ENST00000562570 IFNAR1P17181 557 aa20.25■□□□□ 0.83
AC009041.2-203ENST00000562570 MYL5Q02045 173 aa20.25■□□□□ 0.83
AC009041.2-203ENST00000562570 ATRIPQ8WXE1 791 aa20.25■□□□□ 0.83
AC009041.2-203ENST00000562570 RFX7Q2KHR2 1363 aa20.25■□□□□ 0.83
AC009041.2-203ENST00000562570 ERCC6LQ2NKX8 1250 aa20.25■□□□□ 0.83
AC009041.2-203ENST00000562570 SRBD1Q8N5C6 995 aaKnown RBP20.25■□□□□ 0.83
AC009041.2-203ENST00000562570 SH3RF3Q8TEJ3 882 aaPredicted RBP20.25■□□□□ 0.83
AC009041.2-203ENST00000562570 A0A1W2PQ27 194 aa20.25■□□□□ 0.83
AC009041.2-203ENST00000562570 A0A1W2PQ64 194 aa20.25■□□□□ 0.83
AC009041.2-203ENST00000562570 A0A1W2PQD8 194 aa20.25■□□□□ 0.83
AC009041.2-203ENST00000562570 TFRCP02786 760 aaKnown RBP20.25■□□□□ 0.83
AC009041.2-203ENST00000562570 TPM3P06753 285 aa20.25■□□□□ 0.83
AC009041.2-203ENST00000562570 TPTE2Q6XPS3 522 aa20.25■□□□□ 0.83
AC009041.2-203ENST00000562570 VPS16Q9H269 839 aa20.25■□□□□ 0.83
AC009041.2-203ENST00000562570 TEX33O43247 280 aa20.24■□□□□ 0.83
AC009041.2-203ENST00000562570 NCAPHQ15003 741 aa20.24■□□□□ 0.83
AC009041.2-203ENST00000562570 MAN1B1Q9UKM7 699 aa20.24■□□□□ 0.83
AC009041.2-203ENST00000562570 NHSL1Q5SYE7 1610 aa20.24■□□□□ 0.83
AC009041.2-203ENST00000562570 GJA10Q969M2 543 aa20.24■□□□□ 0.83
AC009041.2-203ENST00000562570 MAP7D2Q96T17 732 aa20.24■□□□□ 0.83
AC009041.2-203ENST00000562570 TNS2Q63HR2 1409 aa20.24■□□□□ 0.83
AC009041.2-203ENST00000562570 SPATA31A5Q5VU36 1347 aa20.24■□□□□ 0.83
AC009041.2-203ENST00000562570 SPATA31A7Q8IWB4 1347 aa20.24■□□□□ 0.83
AC009041.2-203ENST00000562570 DCP1AQ9NPI6 582 aaPredicted RBP20.23■□□□□ 0.83
AC009041.2-203ENST00000562570 AFF2P51816 1311 aa20.23■□□□□ 0.83
AC009041.2-203ENST00000562570 XBP1P17861 261 aa20.23■□□□□ 0.83
AC009041.2-203ENST00000562570 PLCD1P51178 756 aa20.23■□□□□ 0.83
AC009041.2-203ENST00000562570 E4F1Q66K89 784 aaPredicted RBP20.23■□□□□ 0.83
AC009041.2-203ENST00000562570 CCDC196A0A1B0GTZ2 297 aa20.23■□□□□ 0.83
AC009041.2-203ENST00000562570 FAM196BA6NMK8 535 aa20.23■□□□□ 0.83
AC009041.2-203ENST00000562570 TSPY3P0CV98 308 aa20.23■□□□□ 0.83
AC009041.2-203ENST00000562570 TSPY8P0CW00 308 aa20.23■□□□□ 0.83
AC009041.2-203ENST00000562570 EVCP57679 992 aa20.23■□□□□ 0.83
AC009041.2-203ENST00000562570 MRFAP1L1Q96HT8 127 aa20.23■□□□□ 0.83
AC009041.2-203ENST00000562570 RIOK1Q9BRS2 568 aaKnown RBP20.23■□□□□ 0.83
AC009041.2-203ENST00000562570 ZNF804BA4D1E1 1349 aa20.22■□□□□ 0.83
AC009041.2-203ENST00000562570 SMTNL1A8MU46 457 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms