RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 TRIM75PA6NK02 468 aa18.5■□□□□ 0.55
CCNDBP1-203ENST00000562553 SMIM22K7EJ46 135 aa18.5■□□□□ 0.55
CCNDBP1-203ENST00000562553 GABPAQ06546 454 aa18.5■□□□□ 0.55
CCNDBP1-203ENST00000562553 PRRT2Q7Z6L0 340 aaPredicted RBP18.5■□□□□ 0.55
CCNDBP1-203ENST00000562553 SEC62Q99442 399 aaKnown RBP18.5■□□□□ 0.55
CCNDBP1-203ENST00000562553 ATP8A2Q9NTI2 1148 aa18.5■□□□□ 0.55
CCNDBP1-203ENST00000562553 CYP2D7A0A087X1C5 515 aa18.49■□□□□ 0.55
CCNDBP1-203ENST00000562553 GPAA1O43292 621 aa18.49■□□□□ 0.55
CCNDBP1-203ENST00000562553 SHMT1P34896 483 aa18.49■□□□□ 0.55
CCNDBP1-203ENST00000562553 GPAT2Q6NUI2 795 aa18.49■□□□□ 0.55
CCNDBP1-203ENST00000562553 TATDN1Q6P1N9 297 aa18.49■□□□□ 0.55
CCNDBP1-203ENST00000562553 ZBTB21Q9ULJ3 1066 aa18.49■□□□□ 0.55
CCNDBP1-203ENST00000562553 USP17L5A8MUK1 530 aa18.48■□□□□ 0.55
CCNDBP1-203ENST00000562553 ASNSP08243 561 aa18.48■□□□□ 0.55
CCNDBP1-203ENST00000562553 SPP2Q13103 211 aa18.48■□□□□ 0.55
CCNDBP1-203ENST00000562553 LRRFIP1Q32MZ4 808 aaKnown RBP18.48■□□□□ 0.55
CCNDBP1-203ENST00000562553 ZMYM1Q5SVZ6 1142 aa18.48■□□□□ 0.55
CCNDBP1-203ENST00000562553 GADL1Q6ZQY3 521 aa18.48■□□□□ 0.55
CCNDBP1-203ENST00000562553 ANKRD23Q86SG2 305 aa18.48■□□□□ 0.55
CCNDBP1-203ENST00000562553 SLC44A5Q8NCS7 719 aa18.48■□□□□ 0.55
CCNDBP1-203ENST00000562553 EVI5LQ96CN4 794 aa18.48■□□□□ 0.55
CCNDBP1-203ENST00000562553 DYNLL2Q96FJ2 89 aa18.48■□□□□ 0.55
CCNDBP1-203ENST00000562553 ZCCHC17Q9NP64 241 aaKnown RBP18.48■□□□□ 0.55
CCNDBP1-203ENST00000562553 ZSWIM8A7E2V4 1837 aa18.47■□□□□ 0.55
CCNDBP1-203ENST00000562553 GSG1L2A8MUP6 293 aa18.47■□□□□ 0.55
CCNDBP1-203ENST00000562553 USP17L12C9JPN9 530 aa18.47■□□□□ 0.55
CCNDBP1-203ENST00000562553 USP17L21D6R901 530 aa18.47■□□□□ 0.55
CCNDBP1-203ENST00000562553 PDHXO00330 501 aa18.47■□□□□ 0.55
CCNDBP1-203ENST00000562553 FKTNO75072 461 aa18.47■□□□□ 0.55
CCNDBP1-203ENST00000562553 GH2P01242 217 aa18.47■□□□□ 0.55
CCNDBP1-203ENST00000562553 PDE4AP27815 886 aa18.47■□□□□ 0.55
CCNDBP1-203ENST00000562553 ZNF280CQ8ND82 737 aa18.47■□□□□ 0.55
CCNDBP1-203ENST00000562553 OSBPL3Q9H4L5 887 aa18.47■□□□□ 0.55
CCNDBP1-203ENST00000562553 ZFYVE28Q9HCC9 887 aa18.47■□□□□ 0.55
CCNDBP1-203ENST00000562553 EPB41L4AQ9HCS5 686 aaPredicted RBP18.47■□□□□ 0.55
CCNDBP1-203ENST00000562553 HPS5Q9UPZ3 1129 aa18.47■□□□□ 0.55
CCNDBP1-203ENST00000562553 CERKLQ49MI3 558 aaPredicted RBP18.46■□□□□ 0.55
CCNDBP1-203ENST00000562553 C12orf60Q5U649 245 aa18.46■□□□□ 0.55
CCNDBP1-203ENST00000562553 CTR9Q6PD62 1173 aa18.46■□□□□ 0.55
CCNDBP1-203ENST00000562553 HMGCS2P54868 508 aa18.45■□□□□ 0.54
CCNDBP1-203ENST00000562553 CAP1Q01518 475 aa18.45■□□□□ 0.54
CCNDBP1-203ENST00000562553 FBXO46Q6PJ61 603 aaPredicted RBP18.45■□□□□ 0.54
CCNDBP1-203ENST00000562553 CCDC129Q6ZRS4 1044 aa18.45■□□□□ 0.54
CCNDBP1-203ENST00000562553 FASTKD5Q7L8L6 764 aaKnown RBP18.45■□□□□ 0.54
CCNDBP1-203ENST00000562553 DDRGK1Q96HY6 314 aa18.45■□□□□ 0.54
CCNDBP1-203ENST00000562553 WDR18Q9BV38 432 aa18.45■□□□□ 0.54
CCNDBP1-203ENST00000562553 TBC1D2Q9BYX2 928 aa18.45■□□□□ 0.54
CCNDBP1-203ENST00000562553 AS3MTQ9HBK9 375 aa18.45■□□□□ 0.54
CCNDBP1-203ENST00000562553 GINM1Q9NU53 330 aa18.45■□□□□ 0.54
CCNDBP1-203ENST00000562553 ADGRA2Q96PE1 1338 aa18.45■□□□□ 0.54
CCNDBP1-203ENST00000562553 TRIM6-TRIM34B2RNG4 842 aa18.44■□□□□ 0.54
CCNDBP1-203ENST00000562553 TLR2O60603 784 aa18.44■□□□□ 0.54
CCNDBP1-203ENST00000562553 GUCY1A2P33402 732 aa18.44■□□□□ 0.54
CCNDBP1-203ENST00000562553 MTMR2Q13614 643 aa18.44■□□□□ 0.54
CCNDBP1-203ENST00000562553 ABCB5Q2M3G0 1257 aa18.44■□□□□ 0.54
CCNDBP1-203ENST00000562553 TREML2Q5T2D2 321 aa18.44■□□□□ 0.54
CCNDBP1-203ENST00000562553 CYP2C8P10632 490 aa18.43■□□□□ 0.54
CCNDBP1-203ENST00000562553 GNAT2P19087 354 aa18.43■□□□□ 0.54
CCNDBP1-203ENST00000562553 SP3Q02447 781 aa18.43■□□□□ 0.54
CCNDBP1-203ENST00000562553 GIMAP6Q6P9H5 292 aa18.43■□□□□ 0.54
CCNDBP1-203ENST00000562553 CD99L2Q8TCZ2 262 aa18.43■□□□□ 0.54
CCNDBP1-203ENST00000562553 RILPL2Q969X0 211 aa18.43■□□□□ 0.54
CCNDBP1-203ENST00000562553 FAM227BQ96M60 508 aa18.43■□□□□ 0.54
CCNDBP1-203ENST00000562553 ARPP21Q9UBL0 812 aaPredicted RBP18.43■□□□□ 0.54
CCNDBP1-203ENST00000562553 SWAP70Q9UH65 585 aa18.43■□□□□ 0.54
CCNDBP1-203ENST00000562553 AGTPBP1Q9UPW5 1226 aa18.43■□□□□ 0.54
CCNDBP1-203ENST00000562553 A0A0D9SFI3 127 aa18.42■□□□□ 0.54
CCNDBP1-203ENST00000562553 FOXP2O15409 715 aa18.42■□□□□ 0.54
CCNDBP1-203ENST00000562553 CDK8P49336 464 aa18.42■□□□□ 0.54
CCNDBP1-203ENST00000562553 SOX10P56693 466 aa18.42■□□□□ 0.54
CCNDBP1-203ENST00000562553 BACE1P56817 501 aa18.42■□□□□ 0.54
CCNDBP1-203ENST00000562553 SEPT2Q15019 361 aa18.42■□□□□ 0.54
CCNDBP1-203ENST00000562553 RAB3GAP1Q15042 981 aa18.42■□□□□ 0.54
CCNDBP1-203ENST00000562553 SBK1Q52WX2 424 aa18.42■□□□□ 0.54
CCNDBP1-203ENST00000562553 SH3D19Q5HYK7 790 aa18.42■□□□□ 0.54
CCNDBP1-203ENST00000562553 C16orf86Q6ZW13 317 aa18.42■□□□□ 0.54
CCNDBP1-203ENST00000562553 AMOTL1Q8IY63 956 aa18.42■□□□□ 0.54
CCNDBP1-203ENST00000562553 PROCA1Q8NCQ7 364 aaPredicted RBP18.42■□□□□ 0.54
CCNDBP1-203ENST00000562553 CPA4Q9UI42 421 aa18.42■□□□□ 0.54
CCNDBP1-203ENST00000562553 PATL2C9JE40 543 aaKnown RBP18.41■□□□□ 0.54
CCNDBP1-203ENST00000562553 APPP05067 770 aa18.41■□□□□ 0.54
CCNDBP1-203ENST00000562553 AKR1B1P15121 316 aa18.41■□□□□ 0.54
CCNDBP1-203ENST00000562553 TDO2P48775 406 aa18.41■□□□□ 0.54
CCNDBP1-203ENST00000562553 NMIQ13287 307 aaPredicted RBP18.41■□□□□ 0.54
CCNDBP1-203ENST00000562553 C17orf99Q6UX52 265 aa18.41■□□□□ 0.54
CCNDBP1-203ENST00000562553 IFNL3Q8IZI9 196 aa18.41■□□□□ 0.54
CCNDBP1-203ENST00000562553 STK11IPQ8N1F8 1099 aa18.41■□□□□ 0.54
CCNDBP1-203ENST00000562553 PARK7Q99497 189 aaKnown RBP18.41■□□□□ 0.54
CCNDBP1-203ENST00000562553 CABP5Q9NP86 173 aa18.41■□□□□ 0.54
CCNDBP1-203ENST00000562553 SLC45A1Q9Y2W3 748 aa18.41■□□□□ 0.54
CCNDBP1-203ENST00000562553 ROBO3Q96MS0 1386 aa18.41■□□□□ 0.54
CCNDBP1-203ENST00000562553 GREB1LQ9C091 1923 aaPredicted RBP18.41■□□□□ 0.54
CCNDBP1-203ENST00000562553 PDE4DIPQ5VU43 2346 aa18.4■□□□□ 0.54
CCNDBP1-203ENST00000562553 MINDY4BA8MYZ0 360 aa18.4■□□□□ 0.54
CCNDBP1-203ENST00000562553 USP17L10C9JJH3 530 aa18.4■□□□□ 0.54
CCNDBP1-203ENST00000562553 MPHOSPH10O00566 681 aaKnown RBP18.4■□□□□ 0.54
CCNDBP1-203ENST00000562553 VPS53Q5VIR6 699 aa18.4■□□□□ 0.54
CCNDBP1-203ENST00000562553 ACER1Q8TDN7 264 aa18.4■□□□□ 0.54
CCNDBP1-203ENST00000562553 ERO1AQ96HE7 468 aa18.4■□□□□ 0.54
CCNDBP1-203ENST00000562553 HELLSQ9NRZ9 838 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms