RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 CD2APQ9Y5K6 639 aa12.5□□□□□ -0.41
RPAP1-204ENST00000562303 CNGA1P29973 690 aa12.5□□□□□ -0.41
RPAP1-204ENST00000562303 LACTBP83111 547 aaPredicted RBP12.5□□□□□ -0.41
RPAP1-204ENST00000562303 PAK1Q13153 545 aa12.5□□□□□ -0.41
RPAP1-204ENST00000562303 CYP26C1Q6V0L0 522 aa12.5□□□□□ -0.41
RPAP1-204ENST00000562303 SDCCAG8Q86SQ7 713 aaPredicted RBP12.5□□□□□ -0.41
RPAP1-204ENST00000562303 MED10Q9BTT4 135 aa12.5□□□□□ -0.41
RPAP1-204ENST00000562303 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.5□□□□□ -0.411e-11■■■■□ 22.3
RPAP1-204ENST00000562303 NR1I2O75469 434 aa12.5□□□□□ -0.41
RPAP1-204ENST00000562303 HPDP32754 393 aaPredicted RBP12.5□□□□□ -0.41
RPAP1-204ENST00000562303 CEP85LQ5SZL2 805 aa12.5□□□□□ -0.41
RPAP1-204ENST00000562303 C8orf74Q6P047 294 aa12.5□□□□□ -0.41
RPAP1-204ENST00000562303 LPIN2Q92539 896 aa12.5□□□□□ -0.41
RPAP1-204ENST00000562303 MLXIPQ9HAP2 919 aa12.5□□□□□ -0.41
RPAP1-204ENST00000562303 SYNRGQ9UMZ2 1314 aa12.5□□□□□ -0.41
RPAP1-204ENST00000562303 PSMD6Q15008 389 aa12.5□□□□□ -0.41
RPAP1-204ENST00000562303 TAOK1Q7L7X3 1001 aa12.5□□□□□ -0.41
RPAP1-204ENST00000562303 NELFCDQ8IXH7 590 aa12.5□□□□□ -0.41
RPAP1-204ENST00000562303 DIS3L2Q8IYB7 885 aaKnown RBP12.5□□□□□ -0.41
RPAP1-204ENST00000562303 LZTS2Q9BRK4 669 aa12.5□□□□□ -0.41
RPAP1-204ENST00000562303 TRIM31Q9BZY9 425 aa12.5□□□□□ -0.41
RPAP1-204ENST00000562303 TRPM2O94759 1503 aa12.5□□□□□ -0.41
RPAP1-204ENST00000562303 TNNI1P19237 187 aa12.5□□□□□ -0.41
RPAP1-204ENST00000562303 YARSP54577 528 aaKnown RBP12.5□□□□□ -0.41
RPAP1-204ENST00000562303 ABCA10Q8WWZ4 1543 aa12.5□□□□□ -0.41
RPAP1-204ENST00000562303 POLR2DO15514 142 aaKnown RBP12.49□□□□□ -0.41
RPAP1-204ENST00000562303 ABL1P00519 1130 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 BCRP11274 1271 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 KCNA6P17658 529 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 BEND3Q5T5X7 828 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 OTUD6AQ7L8S5 288 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 ZHX1Q9UKY1 873 aaPredicted RBP12.49□□□□□ -0.41
RPAP1-204ENST00000562303 SLC27A2O14975 620 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 TUBBP07437 444 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 NEDD9Q14511 834 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 PLEKHM2Q8IWE5 1019 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 DEPTORQ8TB45 409 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 TRPC6Q9Y210 931 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 ABCC1P33527 1531 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 SLC12A2P55011 1212 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 SLC9C1Q4G0N8 1177 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 GKAP1Q5VSY0 366 aaPredicted RBP12.49□□□□□ -0.41
RPAP1-204ENST00000562303 KLHDC4Q8TBB5 520 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 HDXQ7Z353 690 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 SPATA5Q8NB90 893 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 NAPGQ99747 312 aaPredicted RBP12.49□□□□□ -0.41
RPAP1-204ENST00000562303 USP40Q9NVE5 1235 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 USP21Q9UK80 565 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 HMGXB3Q12766 1538 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 A1BGP04217 495 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 MAN1A1P33908 653 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 YWHAEP62258 255 aaKnown RBP12.49□□□□□ -0.41
RPAP1-204ENST00000562303 DPY19L2Q6NUT2 758 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 TPH2Q8IWU9 490 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 TBC1D22AQ8WUA7 517 aa12.49□□□□□ -0.41
RPAP1-204ENST00000562303 INTS4Q96HW7 963 aaKnown RBP12.49□□□□□ -0.41
RPAP1-204ENST00000562303 ERCC3P19447 782 aa12.48□□□□□ -0.41
RPAP1-204ENST00000562303 MYL10Q9BUA6 226 aa12.48□□□□□ -0.41
RPAP1-204ENST00000562303 NCOA5Q9HCD5 579 aaKnown RBP12.48□□□□□ -0.41
RPAP1-204ENST00000562303 OATP04181 439 aa12.48□□□□□ -0.41
RPAP1-204ENST00000562303 GNPTABQ3T906 1256 aa12.48□□□□□ -0.41
RPAP1-204ENST00000562303 LGSNQ5TDP6 509 aa12.48□□□□□ -0.41
RPAP1-204ENST00000562303 ARHGEF16Q5VV41 709 aa12.48□□□□□ -0.41
RPAP1-204ENST00000562303 NUP58Q9BVL2 599 aa12.48□□□□□ -0.41
RPAP1-204ENST00000562303 MYO1AQ9UBC5 1043 aa12.48□□□□□ -0.41
RPAP1-204ENST00000562303 NOC2LQ9Y3T9 749 aaKnown RBP12.48□□□□□ -0.41
RPAP1-204ENST00000562303 RPRD2Q5VT52 1461 aaKnown RBP12.48□□□□□ -0.41
RPAP1-204ENST00000562303 PALM3A6NDB9 673 aaPredicted RBP12.48□□□□□ -0.41
RPAP1-204ENST00000562303 SPDYE16A6NNV3 312 aaPredicted RBP12.48□□□□□ -0.41
RPAP1-204ENST00000562303 PPP2R3AQ06190 1150 aa12.48□□□□□ -0.41
RPAP1-204ENST00000562303 TNFAIP1Q13829 316 aa12.48□□□□□ -0.41
RPAP1-204ENST00000562303 SPDYE2Q495Y8 402 aa12.48□□□□□ -0.41
RPAP1-204ENST00000562303 MIER3Q7Z3K6 550 aa12.48□□□□□ -0.41
RPAP1-204ENST00000562303 PHACTR3Q96KR7 559 aa12.48□□□□□ -0.41
RPAP1-204ENST00000562303 FAM193BQ96PV7 902 aaPredicted RBP12.48□□□□□ -0.41
RPAP1-204ENST00000562303 TESPA1A2RU30 521 aaPredicted RBP12.48□□□□□ -0.41
RPAP1-204ENST00000562303 BSPRYQ5W0U4 402 aa12.48□□□□□ -0.41
RPAP1-204ENST00000562303 SEPT14Q6ZU15 432 aa12.48□□□□□ -0.41
RPAP1-204ENST00000562303 CABP7Q86V35 215 aa12.48□□□□□ -0.41
RPAP1-204ENST00000562303 GPIHBP1Q8IV16 184 aa12.48□□□□□ -0.41
RPAP1-204ENST00000562303 TNNQ9UQP3 1299 aa12.48□□□□□ -0.41
RPAP1-204ENST00000562303 MAP3K19Q56UN5 1328 aa12.48□□□□□ -0.41
RPAP1-204ENST00000562303 TTC36A6NLP5 189 aa12.47□□□□□ -0.41
RPAP1-204ENST00000562303 CUTAO60888 179 aa12.47□□□□□ -0.41
RPAP1-204ENST00000562303 SECISBP2LQ93073 1101 aaKnown RBP12.47□□□□□ -0.41
RPAP1-204ENST00000562303 ST7Q9NRC1 585 aa12.47□□□□□ -0.41
RPAP1-204ENST00000562303 KCNG1Q9UIX4 513 aa12.47□□□□□ -0.41
RPAP1-204ENST00000562303 MROH5Q6ZUA9 1318 aa12.47□□□□□ -0.41
RPAP1-204ENST00000562303 CEP104O60308 925 aa12.47□□□□□ -0.41
RPAP1-204ENST00000562303 SEPT6Q14141 434 aa12.47□□□□□ -0.41
RPAP1-204ENST00000562303 HHATQ5VTY9 493 aa12.47□□□□□ -0.41
RPAP1-204ENST00000562303 GADL1Q6ZQY3 521 aa12.47□□□□□ -0.41
RPAP1-204ENST00000562303 CCDC89Q8N998 374 aa12.47□□□□□ -0.41
RPAP1-204ENST00000562303 CHURC1Q8WUH1 139 aa12.47□□□□□ -0.41
RPAP1-204ENST00000562303 TTF2Q9UNY4 1162 aaKnown RBP12.47□□□□□ -0.41
RPAP1-204ENST00000562303 A2MP01023 1474 aa12.47□□□□□ -0.41
RPAP1-204ENST00000562303 SORBS3O60504 671 aa12.47□□□□□ -0.41
RPAP1-204ENST00000562303 GAS7O60861 476 aa12.47□□□□□ -0.41
RPAP1-204ENST00000562303 GTF2IP78347 998 aa12.47□□□□□ -0.41
RPAP1-204ENST00000562303 TFAP4Q01664 338 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms