RNA–Protein interactions for RNA: ENST00000561992.5

TCF4-211, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-211ENST00000561992 KARSQ15046 597 aaKnown RBP11.23□□□□□ -0.61
TCF4-211ENST00000561992 UBE3CQ15386 1083 aa11.23□□□□□ -0.61
TCF4-211ENST00000561992 ZNF662Q6ZS27 426 aa11.23□□□□□ -0.61
TCF4-211ENST00000561992 APTXQ7Z2E3 356 aaKnown RBP11.23□□□□□ -0.61
TCF4-211ENST00000561992 C10orf67Q8IYJ2 551 aa11.23□□□□□ -0.61
TCF4-211ENST00000561992 STK11IPQ8N1F8 1099 aa11.23□□□□□ -0.61
TCF4-211ENST00000561992 RUBCNQ92622 972 aa11.23□□□□□ -0.61
TCF4-211ENST00000561992 CLIC6Q96NY7 704 aa11.23□□□□□ -0.61
TCF4-211ENST00000561992 ABCB6Q9NP58 842 aa11.23□□□□□ -0.61
TCF4-211ENST00000561992 RNF216Q9NWF9 866 aaPredicted RBP11.23□□□□□ -0.61
TCF4-211ENST00000561992 ADD3Q9UEY8 706 aaKnown RBP11.23□□□□□ -0.61
TCF4-211ENST00000561992 GLI3P10071 1580 aa11.23□□□□□ -0.61
TCF4-211ENST00000561992 GOLGA8AA7E2F4 631 aa11.23□□□□□ -0.61
TCF4-211ENST00000561992 ATP5J2-PTCD1G3V325 749 aa11.23□□□□□ -0.61
TCF4-211ENST00000561992 ACTN4O43707 911 aaKnown RBP11.23□□□□□ -0.61
TCF4-211ENST00000561992 PTCD1O75127 700 aaKnown RBP11.23□□□□□ -0.61
TCF4-211ENST00000561992 FKBP4Q02790 459 aaKnown RBP eCLIP11.23□□□□□ -0.61
TCF4-211ENST00000561992 ZNF569Q5MCW4 686 aa11.23□□□□□ -0.61
TCF4-211ENST00000561992 RAD9BQ6WBX8 426 aa11.23□□□□□ -0.61
TCF4-211ENST00000561992 TRIM22Q8IYM9 498 aa11.23□□□□□ -0.61
TCF4-211ENST00000561992 GSDMAQ96QA5 445 aa11.23□□□□□ -0.61
TCF4-211ENST00000561992 CNNM2Q9H8M5 875 aa11.23□□□□□ -0.61
TCF4-211ENST00000561992 CCDC196A0A1B0GTZ2 297 aa11.22□□□□□ -0.61
TCF4-211ENST00000561992 PPFIA3O75145 1194 aa11.22□□□□□ -0.61
TCF4-211ENST00000561992 PPFIA4O75335 1185 aa11.22□□□□□ -0.61
TCF4-211ENST00000561992 CORO7P57737 925 aa11.22□□□□□ -0.61
TCF4-211ENST00000561992 MCM6Q14566 821 aa11.22□□□□□ -0.61
TCF4-211ENST00000561992 PPP2R5BQ15173 497 aa11.22□□□□□ -0.61
TCF4-211ENST00000561992 TTC31Q49AM3 519 aaPredicted RBP11.22□□□□□ -0.61
TCF4-211ENST00000561992 ESCO1Q5FWF5 840 aa11.22□□□□□ -0.61
TCF4-211ENST00000561992 CYP26C1Q6V0L0 522 aa11.22□□□□□ -0.61
TCF4-211ENST00000561992 EFCAB13Q8IY85 973 aa11.22□□□□□ -0.61
TCF4-211ENST00000561992 CCDC148Q8NFR7 591 aa11.22□□□□□ -0.61
TCF4-211ENST00000561992 XAGE2Q96GT9 111 aa11.22□□□□□ -0.61
TCF4-211ENST00000561992 PNKPQ96T60 521 aa11.22□□□□□ -0.61
TCF4-211ENST00000561992 DESI2Q9BSY9 194 aa11.22□□□□□ -0.61
TCF4-211ENST00000561992 GJB4Q9NTQ9 266 aa11.22□□□□□ -0.61
TCF4-211ENST00000561992 AATFQ9NY61 560 aaKnown RBP eCLIP11.22□□□□□ -0.61
TCF4-211ENST00000561992 SERTAD1Q9UHV2 236 aa11.22□□□□□ -0.61
TCF4-211ENST00000561992 UBN2Q6ZU65 1347 aa11.22□□□□□ -0.61
TCF4-211ENST00000561992 LRP6O75581 1613 aa11.22□□□□□ -0.61
TCF4-211ENST00000561992 TRPM3Q9HCF6 1732 aaPredicted RBP11.22□□□□□ -0.61
TCF4-211ENST00000561992 LRRC10BA6NIK2 292 aa11.21□□□□□ -0.61
TCF4-211ENST00000561992 SOWAHDA6NJG2 315 aa11.21□□□□□ -0.61
TCF4-211ENST00000561992 POLR2DO15514 142 aaKnown RBP11.21□□□□□ -0.61
TCF4-211ENST00000561992 ADD2P35612 726 aa11.21□□□□□ -0.61
TCF4-211ENST00000561992 RBL2Q08999 1139 aa11.21□□□□□ -0.61
TCF4-211ENST00000561992 CUL4BQ13620 913 aa11.21□□□□□ -0.61
TCF4-211ENST00000561992 LRRC24Q50LG9 513 aa11.21□□□□□ -0.61
TCF4-211ENST00000561992 ICE2Q659A1 982 aa11.21□□□□□ -0.61
TCF4-211ENST00000561992 EHBP1Q8NDI1 1231 aa11.21□□□□□ -0.61
TCF4-211ENST00000561992 ANKRD20A12PQ8NF67 263 aa11.21□□□□□ -0.61
TCF4-211ENST00000561992 IGDCC4Q8TDY8 1250 aa11.21□□□□□ -0.61
TCF4-211ENST00000561992 TRERF1Q96PN7 1200 aa11.21□□□□□ -0.61
TCF4-211ENST00000561992 PLA2G12BQ9BX93 195 aa11.21□□□□□ -0.61
TCF4-211ENST00000561992 TEX13AQ9BXU3 409 aaPredicted RBP11.21□□□□□ -0.61
TCF4-211ENST00000561992 LZTFL1Q9NQ48 299 aa11.21□□□□□ -0.61
TCF4-211ENST00000561992 BCCIPQ9P287 314 aaKnown RBP eCLIP11.21□□□□□ -0.61
TCF4-211ENST00000561992 LIMA1Q9UHB6 759 aaKnown RBP11.21□□□□□ -0.61
TCF4-211ENST00000561992 FAN1Q9Y2M0 1017 aa11.21□□□□□ -0.61
TCF4-211ENST00000561992 SYNRGQ9UMZ2 1314 aa11.21□□□□□ -0.61
TCF4-211ENST00000561992 BCL9LQ86UU0 1499 aa11.21□□□□□ -0.61
TCF4-211ENST00000561992 PKD1L3Q7Z443 1732 aa11.21□□□□□ -0.61
TCF4-211ENST00000561992 A6NNZ2 444 aa11.21□□□□□ -0.62
TCF4-211ENST00000561992 CKAP4Q07065 602 aaKnown RBP11.21□□□□□ -0.62
TCF4-211ENST00000561992 SEMA3FQ13275 785 aa11.21□□□□□ -0.62
TCF4-211ENST00000561992 CCDC57Q2TAC2 916 aa11.21□□□□□ -0.62
TCF4-211ENST00000561992 TUBB8Q3ZCM7 444 aa11.21□□□□□ -0.62
TCF4-211ENST00000561992 SH3RF1Q7Z6J0 888 aa11.21□□□□□ -0.62
TCF4-211ENST00000561992 CERS3Q8IU89 383 aa11.21□□□□□ -0.62
TCF4-211ENST00000561992 TMTC2Q8N394 836 aa11.21□□□□□ -0.62
TCF4-211ENST00000561992 PUS7LQ9H0K6 701 aaKnown RBP11.21□□□□□ -0.62
TCF4-211ENST00000561992 LY9Q9HBG7 655 aa11.21□□□□□ -0.62
TCF4-211ENST00000561992 SAMSN1Q9NSI8 373 aaKnown RBP11.21□□□□□ -0.62
TCF4-211ENST00000561992 PUF60Q9UHX1 559 aaKnown RBP11.21□□□□□ -0.62
TCF4-211ENST00000561992 ECM29Q5VYK3 1845 aa11.21□□□□□ -0.62
TCF4-211ENST00000561992 DEXIO95424 95 aa11.2□□□□□ -0.62
TCF4-211ENST00000561992 EIF5P55010 431 aaKnown RBP11.2□□□□□ -0.62
TCF4-211ENST00000561992 AMPD2Q01433 879 aa11.2□□□□□ -0.62
TCF4-211ENST00000561992 TRIM28Q13263 835 aaKnown RBP11.2□□□□□ -0.62
TCF4-211ENST00000561992 SLC9C2Q5TAH2 1124 aa11.2□□□□□ -0.62
TCF4-211ENST00000561992 TMED8Q6PL24 325 aaPredicted RBP11.2□□□□□ -0.62
TCF4-211ENST00000561992 CYB5R4Q7L1T6 521 aa11.2□□□□□ -0.62
TCF4-211ENST00000561992 FERMT2Q96AC1 680 aa11.2□□□□□ -0.62
TCF4-211ENST00000561992 KRT23Q9C075 422 aa11.2□□□□□ -0.62
TCF4-211ENST00000561992 NBPF3Q9H094 633 aa11.2□□□□□ -0.62
TCF4-211ENST00000561992 LCMT1Q9UIC8 334 aa11.2□□□□□ -0.62
TCF4-211ENST00000561992 MYO6Q9UM54 1294 aa11.2□□□□□ -0.62
TCF4-211ENST00000561992 SLC12A7Q9Y666 1083 aa11.2□□□□□ -0.62
TCF4-211ENST00000561992 TIAM2Q8IVF5 1701 aa11.2□□□□□ -0.62
TCF4-211ENST00000561992 PSMD14O00487 310 aa11.2□□□□□ -0.62
TCF4-211ENST00000561992 TOB1P50616 345 aaPredicted RBP11.2□□□□□ -0.62
TCF4-211ENST00000561992 VSNL1P62760 191 aa11.2□□□□□ -0.62
TCF4-211ENST00000561992 MTF1Q14872 753 aa11.2□□□□□ -0.62
TCF4-211ENST00000561992 TMEM67Q5HYA8 995 aa11.2□□□□□ -0.62
TCF4-211ENST00000561992 NBPF14Q5TI25 921 aa11.2□□□□□ -0.62
TCF4-211ENST00000561992 NFXL1Q6ZNB6 911 aa11.2□□□□□ -0.62
TCF4-211ENST00000561992 DIS3L2Q8IYB7 885 aaKnown RBP11.2□□□□□ -0.62
TCF4-211ENST00000561992 SLC35F6Q8N357 371 aa11.2□□□□□ -0.62
TCF4-211ENST00000561992 AFAP1L1Q8TED9 768 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms