RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 BRD3Q15059 726 aa15.91■□□□□ 0.14
VPS9D1-202ENST00000561976 ZNF569Q5MCW4 686 aa15.91■□□□□ 0.14
VPS9D1-202ENST00000561976 RAD9BQ6WBX8 426 aa15.91■□□□□ 0.14
VPS9D1-202ENST00000561976 NUP133Q8WUM0 1156 aa15.91■□□□□ 0.14
VPS9D1-202ENST00000561976 SRPRBQ9Y5M8 271 aaKnown RBP15.91■□□□□ 0.14
VPS9D1-202ENST00000561976 ALS2Q96Q42 1657 aa15.91■□□□□ 0.14
VPS9D1-202ENST00000561976 ERICH2A1L162 156 aa15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 TULP2O00295 520 aa15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 MBD4O95243 580 aa15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 TRIM28Q13263 835 aaKnown RBP15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 WTAPQ15007 396 aa15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 KIF4BQ2VIQ3 1234 aa15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 ZNF579Q8NAF0 562 aaKnown RBP15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 TTLL11Q8NHH1 800 aa15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 ZBTB9Q96C00 473 aa15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 KRT23Q9C075 422 aa15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 CNNM2Q9H8M5 875 aa15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 ATRNO75882 1429 aa15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 MST1RQ04912 1400 aa15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 PKD1L3Q7Z443 1732 aa15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 DEXIO95424 95 aa15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 LMAN1P49257 510 aa15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 RAD51AP2Q09MP3 1159 aa15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 MCM6Q14566 821 aa15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 AKNAD1Q5T1N1 836 aa15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 MAGEB6Q8N7X4 407 aa15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 CEP112Q8N8E3 955 aa15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 ZNF512BQ96KM6 892 aaPredicted RBP15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 ARMT1Q9H993 441 aa15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 EPB41L4AQ9HCS5 686 aaPredicted RBP15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 PLEKHG2Q9H7P9 1386 aa15.9■□□□□ 0.14
VPS9D1-202ENST00000561976 A0A0U1RQJ8 604 aa15.89■□□□□ 0.13
VPS9D1-202ENST00000561976 CAPN2P17655 700 aa15.89■□□□□ 0.13
VPS9D1-202ENST00000561976 GTF2E1P29083 439 aaPredicted RBP15.89■□□□□ 0.13
VPS9D1-202ENST00000561976 FILIP1LQ4L180 1135 aa15.89■□□□□ 0.13
VPS9D1-202ENST00000561976 SPATA1Q5VX52 437 aa15.89■□□□□ 0.13
VPS9D1-202ENST00000561976 OXER1Q8TDS5 423 aa15.89■□□□□ 0.13
VPS9D1-202ENST00000561976 ATRIPQ8WXE1 791 aa15.89■□□□□ 0.13
VPS9D1-202ENST00000561976 NAA15Q9BXJ9 866 aaKnown RBP15.89■□□□□ 0.13
VPS9D1-202ENST00000561976 SYNRGQ9UMZ2 1314 aa15.89■□□□□ 0.13
VPS9D1-202ENST00000561976 TCRBV5S4A2TA0A5A2 114 aa15.89■□□□□ 0.13
VPS9D1-202ENST00000561976 PDE8BO95263 885 aa15.89■□□□□ 0.13
VPS9D1-202ENST00000561976 UQCRFS1P1P0C7P4 283 aa15.89■□□□□ 0.13
VPS9D1-202ENST00000561976 TDO2P48775 406 aa15.89■□□□□ 0.13
VPS9D1-202ENST00000561976 ALX1Q15699 326 aa15.89■□□□□ 0.13
VPS9D1-202ENST00000561976 ZSCAN26Q16670 478 aa15.89■□□□□ 0.13
VPS9D1-202ENST00000561976 CDC23Q9UJX2 597 aa15.89■□□□□ 0.13
VPS9D1-202ENST00000561976 ADAM21Q9UKJ8 722 aa15.89■□□□□ 0.13
VPS9D1-202ENST00000561976 ECM29Q5VYK3 1845 aa15.89■□□□□ 0.13
VPS9D1-202ENST00000561976 COL18A1P39060 1754 aa15.88■□□□□ 0.13
VPS9D1-202ENST00000561976 HELBQ8NG08 1087 aaPredicted RBP15.88■□□□□ 0.13
VPS9D1-202ENST00000561976 KCPQ6ZWJ8 1503 aa15.88■□□□□ 0.13
VPS9D1-202ENST00000561976 CCDC196A0A1B0GTZ2 297 aa15.88■□□□□ 0.13
VPS9D1-202ENST00000561976 H3BQF6 201 aa15.88■□□□□ 0.13
VPS9D1-202ENST00000561976 CASP1P29466 404 aa15.88■□□□□ 0.13
VPS9D1-202ENST00000561976 CRACR2BQ8N4Y2 399 aaPredicted RBP15.88■□□□□ 0.13
VPS9D1-202ENST00000561976 TACC3Q9Y6A5 838 aa15.88■□□□□ 0.13
VPS9D1-202ENST00000561976 CASP14P31944 242 aa15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 CTSWP56202 376 aa15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 MAP3K12Q12852 859 aa15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 AKAP11Q9UKA4 1901 aa15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 CTAGE9A4FU28 777 aa15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 POTEB2H3BUK9 544 aa15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 ERLIN1O75477 346 aa15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 CD44P16070 742 aaKnown RBP15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 AKAP17AQ02040 695 aaKnown RBP15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 SMYD4Q8IYR2 804 aaPredicted RBP15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 SPATA20Q8TB22 786 aa15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 EXOC4Q96A65 974 aa15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 EPSTI1Q96J88 318 aa15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 CTAGE1Q96RT6 745 aa15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 ANKZF1Q9H8Y5 726 aa15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 PDE11AQ9HCR9 933 aa15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 TRIM75PA6NK02 468 aa15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 PRKAB2O43741 272 aa15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 MFAP3LO75121 409 aa15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 RHOXF2BP0C7M4 288 aa15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 ARID4AP29374 1257 aaPredicted RBP15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 MUM1L1Q5H9M0 696 aa15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 HDXQ7Z353 690 aa15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 RHOXF2Q9BQY4 288 aa15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 VPS18Q9P253 973 aa15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 ADD3Q9UEY8 706 aaKnown RBP15.87■□□□□ 0.13
VPS9D1-202ENST00000561976 IRS4O14654 1257 aaPredicted RBP15.86■□□□□ 0.13
VPS9D1-202ENST00000561976 MAP2K7O14733 419 aa15.86■□□□□ 0.13
VPS9D1-202ENST00000561976 APTXQ7Z2E3 356 aaKnown RBP15.86■□□□□ 0.13
VPS9D1-202ENST00000561976 DNAJC10Q8IXB1 793 aa15.86■□□□□ 0.13
VPS9D1-202ENST00000561976 SLC35F6Q8N357 371 aa15.86■□□□□ 0.13
VPS9D1-202ENST00000561976 VGLL2Q8N8G2 317 aa15.86■□□□□ 0.13
VPS9D1-202ENST00000561976 SPATA5Q8NB90 893 aa15.86■□□□□ 0.13
VPS9D1-202ENST00000561976 NACAP1Q9BZK3 213 aa15.86■□□□□ 0.13
VPS9D1-202ENST00000561976 TSPYL1Q9H0U9 437 aa15.86■□□□□ 0.13
VPS9D1-202ENST00000561976 STRN4Q9NRL3 753 aa15.86■□□□□ 0.13
VPS9D1-202ENST00000561976 CWC15Q9P013 229 aaKnown RBP15.86■□□□□ 0.13
VPS9D1-202ENST00000561976 CCT6AP40227 531 aaKnown RBP15.86■□□□□ 0.13
VPS9D1-202ENST00000561976 HLFQ16534 295 aa15.86■□□□□ 0.13
VPS9D1-202ENST00000561976 RASGRP2Q7LDG7 609 aa15.86■□□□□ 0.13
VPS9D1-202ENST00000561976 CNGA4Q8IV77 575 aa15.86■□□□□ 0.13
VPS9D1-202ENST00000561976 FANCBQ8NB91 859 aa15.86■□□□□ 0.13
VPS9D1-202ENST00000561976 PNKPQ96T60 521 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms