RNA–Protein interactions for RNA: ENST00000561878.1

TMEM170A-202, Transcript of transmembrane protein 170A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM170A, Length 1,072 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-202ENST00000561878 GOLIM4O00461 696 aa28.44■■■□□ 2.14
TMEM170A-202ENST00000561878 TNPO2O14787 897 aaKnown RBP28.44■■■□□ 2.14
TMEM170A-202ENST00000561878 GDF11O95390 407 aa28.44■■■□□ 2.14
TMEM170A-202ENST00000561878 PDE6AP16499 860 aa28.44■■■□□ 2.14
TMEM170A-202ENST00000561878 GCLCP48506 637 aaPredicted RBP28.44■■■□□ 2.14
TMEM170A-202ENST00000561878 BACE1P56817 501 aa28.44■■■□□ 2.14
TMEM170A-202ENST00000561878 MTMR2Q13614 643 aa28.44■■■□□ 2.14
TMEM170A-202ENST00000561878 FAM110CQ1W6H9 321 aa28.44■■■□□ 2.14
TMEM170A-202ENST00000561878 ANKRD13CQ8N6S4 541 aa28.44■■■□□ 2.14
TMEM170A-202ENST00000561878 RIOK1Q9BRS2 568 aaKnown RBP28.44■■■□□ 2.14
TMEM170A-202ENST00000561878 EHD4Q9H223 541 aa28.44■■■□□ 2.14
TMEM170A-202ENST00000561878 SERPINB13Q9UIV8 391 aa28.44■■■□□ 2.14
TMEM170A-202ENST00000561878 ZBTB21Q9ULJ3 1066 aa28.44■■■□□ 2.14
TMEM170A-202ENST00000561878 C19orf81C9J6K1 198 aa28.43■■■□□ 2.14
TMEM170A-202ENST00000561878 CRNKL1Q9BZJ0 848 aaKnown RBP28.43■■■□□ 2.14
TMEM170A-202ENST00000561878 NAV1Q8NEY1 1877 aa28.42■■■□□ 2.14
TMEM170A-202ENST00000561878 USP17L10C9JJH3 530 aa28.42■■■□□ 2.14
TMEM170A-202ENST00000561878 SLAIN1Q8ND83 568 aa28.42■■■□□ 2.14
TMEM170A-202ENST00000561878 ASCC2Q9H1I8 757 aaPredicted RBP28.42■■■□□ 2.14
TMEM170A-202ENST00000561878 ATP5JP18859 108 aa28.41■■■□□ 2.14
TMEM170A-202ENST00000561878 UBXN2AP68543 259 aa28.41■■■□□ 2.14
TMEM170A-202ENST00000561878 JAG1P78504 1218 aa28.41■■■□□ 2.14
TMEM170A-202ENST00000561878 LRRCC1Q9C099 1032 aa28.41■■■□□ 2.14
TMEM170A-202ENST00000561878 PAG1Q9NWQ8 432 aa28.41■■■□□ 2.14
TMEM170A-202ENST00000561878 BIN2Q9UBW5 565 aaPredicted RBP28.41■■■□□ 2.14
TMEM170A-202ENST00000561878 ZNF532Q9HCE3 1301 aa28.41■■■□□ 2.14
TMEM170A-202ENST00000561878 DDX60LQ5H9U9 1706 aaKnown RBP28.4■■■□□ 2.14
TMEM170A-202ENST00000561878 IRX3P78415 501 aaPredicted RBP28.4■■■□□ 2.14
TMEM170A-202ENST00000561878 TATDN1Q6P1N9 297 aa28.4■■■□□ 2.14
TMEM170A-202ENST00000561878 COA7Q96BR5 231 aa28.4■■■□□ 2.14
TMEM170A-202ENST00000561878 GABRQQ9UN88 632 aa28.4■■■□□ 2.14
TMEM170A-202ENST00000561878 POLR3DP05423 398 aaPredicted RBP28.39■■■□□ 2.14
TMEM170A-202ENST00000561878 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.39■■■□□ 2.14
TMEM170A-202ENST00000561878 BOLA2Q9H3K6 86 aa28.39■■■□□ 2.14
TMEM170A-202ENST00000561878 GH2P01242 217 aa28.38■■■□□ 2.13
TMEM170A-202ENST00000561878 FLT3LGP49771 235 aa28.38■■■□□ 2.13
TMEM170A-202ENST00000561878 SHROOM1Q2M3G4 852 aaPredicted RBP28.38■■■□□ 2.13
TMEM170A-202ENST00000561878 TCRBV5S4A2TA0A5A2 114 aa28.37■■■□□ 2.13
TMEM170A-202ENST00000561878 HOXA7P31268 230 aaPredicted RBP28.37■■■□□ 2.13
TMEM170A-202ENST00000561878 IRF5Q13568 498 aa28.37■■■□□ 2.13
TMEM170A-202ENST00000561878 MTFR1Q15390 333 aa28.37■■■□□ 2.13
TMEM170A-202ENST00000561878 CERKLQ49MI3 558 aaPredicted RBP28.37■■■□□ 2.13
TMEM170A-202ENST00000561878 NKX2-3Q8TAU0 364 aa28.37■■■□□ 2.13
TMEM170A-202ENST00000561878 EDC3Q96F86 508 aaKnown RBP28.37■■■□□ 2.13
TMEM170A-202ENST00000561878 HAUS7Q99871 368 aa28.37■■■□□ 2.13
TMEM170A-202ENST00000561878 BRCA2P51587 3418 aa28.36■■■□□ 2.13
TMEM170A-202ENST00000561878 ADCY3O60266 1144 aa28.36■■■□□ 2.13
TMEM170A-202ENST00000561878 USP17L2Q6R6M4 530 aa28.36■■■□□ 2.13
TMEM170A-202ENST00000561878 CABP5Q9NP86 173 aa28.36■■■□□ 2.13
TMEM170A-202ENST00000561878 ABCB5Q2M3G0 1257 aa28.35■■■□□ 2.13
TMEM170A-202ENST00000561878 PXYLP1Q8TE99 480 aa28.35■■■□□ 2.13
TMEM170A-202ENST00000561878 FEZ1Q99689 392 aa28.35■■■□□ 2.13
TMEM170A-202ENST00000561878 MCM9Q9NXL9 1143 aa28.35■■■□□ 2.13
TMEM170A-202ENST00000561878 MYH7P12883 1935 aa28.34■■■□□ 2.13
TMEM170A-202ENST00000561878 CCL5P13501 91 aa28.34■■■□□ 2.13
TMEM170A-202ENST00000561878 ADD2P35612 726 aa28.34■■■□□ 2.13
TMEM170A-202ENST00000561878 PLCD1P51178 756 aa28.34■■■□□ 2.13
TMEM170A-202ENST00000561878 LCORLQ8N3X6 602 aa28.34■■■□□ 2.13
TMEM170A-202ENST00000561878 MORF4L1Q9UBU8 362 aa28.34■■■□□ 2.13
TMEM170A-202ENST00000561878 RAB3GAP1Q15042 981 aa28.33■■■□□ 2.13
TMEM170A-202ENST00000561878 GTF3C2Q8WUA4 911 aaPredicted RBP28.33■■■□□ 2.13
TMEM170A-202ENST00000561878 RNF208Q9H0X6 261 aa28.33■■■□□ 2.13
TMEM170A-202ENST00000561878 GJB1P08034 283 aa28.32■■■□□ 2.12
TMEM170A-202ENST00000561878 SHMT1P34896 483 aa28.32■■■□□ 2.12
TMEM170A-202ENST00000561878 USP14P54578 494 aa28.32■■■□□ 2.12
TMEM170A-202ENST00000561878 HERVK_113P62684 666 aa28.32■■■□□ 2.12
TMEM170A-202ENST00000561878 SDR42E1Q8WUS8 393 aa28.32■■■□□ 2.12
TMEM170A-202ENST00000561878 DCP1AQ9NPI6 582 aaPredicted RBP28.32■■■□□ 2.12
TMEM170A-202ENST00000561878 TAOK2Q9UL54 1235 aa28.32■■■□□ 2.12
TMEM170A-202ENST00000561878 MKI67P46013 3256 aaKnown RBP28.31■■■□□ 2.12
TMEM170A-202ENST00000561878 SMARCA5O60264 1052 aaPredicted RBP28.31■■■□□ 2.12
TMEM170A-202ENST00000561878 ZSCAN25Q6NSZ9 544 aa28.31■■■□□ 2.12
TMEM170A-202ENST00000561878 C12orf42Q96LP6 360 aa28.31■■■□□ 2.12
TMEM170A-202ENST00000561878 P2RX7Q99572 595 aaKnown RBP28.31■■■□□ 2.12
TMEM170A-202ENST00000561878 ARMT1Q9H993 441 aa28.31■■■□□ 2.12
TMEM170A-202ENST00000561878 EMILIN3Q9NT22 766 aa28.31■■■□□ 2.12
TMEM170A-202ENST00000561878 DOCK3Q8IZD9 2030 aa28.3■■■□□ 2.12
TMEM170A-202ENST00000561878 MBD4O95243 580 aa28.3■■■□□ 2.12
TMEM170A-202ENST00000561878 ELNP15502 786 aa28.3■■■□□ 2.12
TMEM170A-202ENST00000561878 GJA8P48165 433 aa28.3■■■□□ 2.12
TMEM170A-202ENST00000561878 GABPAQ06546 454 aa28.3■■■□□ 2.12
TMEM170A-202ENST00000561878 GPATCH3Q96I76 525 aa28.3■■■□□ 2.12
TMEM170A-202ENST00000561878 ATP8A2Q9NTI2 1148 aa28.3■■■□□ 2.12
TMEM170A-202ENST00000561878 INHAP05111 366 aa28.29■■■□□ 2.12
TMEM170A-202ENST00000561878 UBE3CQ15386 1083 aa28.29■■■□□ 2.12
TMEM170A-202ENST00000561878 ZYXQ15942 572 aaKnown RBP28.29■■■□□ 2.12
TMEM170A-202ENST00000561878 GPRC5AQ8NFJ5 357 aa28.29■■■□□ 2.12
TMEM170A-202ENST00000561878 GCC1Q96CN9 775 aa28.29■■■□□ 2.12
TMEM170A-202ENST00000561878 KIAA1683Q9H0B3 1180 aa28.29■■■□□ 2.12
TMEM170A-202ENST00000561878 DCTPP1Q9H773 170 aa28.29■■■□□ 2.12
TMEM170A-202ENST00000561878 ECHDC1Q9NTX5 307 aa28.29■■■□□ 2.12
TMEM170A-202ENST00000561878 AMOTL1Q8IY63 956 aa28.28■■■□□ 2.12
TMEM170A-202ENST00000561878 SHISA4Q96DD7 197 aa28.28■■■□□ 2.12
TMEM170A-202ENST00000561878 DDRGK1Q96HY6 314 aa28.28■■■□□ 2.12
TMEM170A-202ENST00000561878 SWAP70Q9UH65 585 aa28.28■■■□□ 2.12
TMEM170A-202ENST00000561878 USP17L15C9J2P7 530 aa28.27■■■□□ 2.12
TMEM170A-202ENST00000561878 USP17L13C9JLJ4 530 aa28.27■■■□□ 2.12
TMEM170A-202ENST00000561878 USP17L11C9JVI0 530 aa28.27■■■□□ 2.12
TMEM170A-202ENST00000561878 USP17L18D6R9N7 530 aa28.27■■■□□ 2.12
TMEM170A-202ENST00000561878 USP17L22D6RA61 530 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms