RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 CCDC26Q8TAB7 109 aa21.09■□□□□ 0.97
RAB40C-206ENST00000561781 BORCS6Q96GS4 357 aa21.09■□□□□ 0.97
RAB40C-206ENST00000561781 NUCKS1Q9H1E3 243 aaKnown RBP21.09■□□□□ 0.97
RAB40C-206ENST00000561781 ASAP1Q9ULH1 1129 aa21.09■□□□□ 0.97
RAB40C-206ENST00000561781 GOLGA6CA6NDK9 693 aa21.08■□□□□ 0.97
RAB40C-206ENST00000561781 KIF5CO60282 957 aa21.08■□□□□ 0.97
RAB40C-206ENST00000561781 SLC3A2P08195 630 aaKnown RBP21.08■□□□□ 0.97
RAB40C-206ENST00000561781 GOLGA6DP0CG33 693 aa21.08■□□□□ 0.97
RAB40C-206ENST00000561781 EZRP15311 586 aaKnown RBP21.08■□□□□ 0.97
RAB40C-206ENST00000561781 TEFQ10587 303 aa21.08■□□□□ 0.97
RAB40C-206ENST00000561781 WHAMMP3Q1A5X7 153 aa21.08■□□□□ 0.97
RAB40C-206ENST00000561781 ZC3H12AQ5D1E8 599 aaKnown RBP21.08■□□□□ 0.97
RAB40C-206ENST00000561781 MICALCLQ6ZW33 695 aa21.08■□□□□ 0.97
RAB40C-206ENST00000561781 SLC52A2Q9HAB3 445 aa21.08■□□□□ 0.97
RAB40C-206ENST00000561781 GOLGA6AQ9NYA3 693 aa21.08■□□□□ 0.97
RAB40C-206ENST00000561781 HMG20BQ9P0W2 317 aa21.08■□□□□ 0.97
RAB40C-206ENST00000561781 CCDC175P0C221 793 aa21.08■□□□□ 0.96
RAB40C-206ENST00000561781 KARSQ15046 597 aaKnown RBP21.08■□□□□ 0.96
RAB40C-206ENST00000561781 TMOD3Q9NYL9 352 aa21.08■□□□□ 0.96
RAB40C-206ENST00000561781 SCN11AQ9UI33 1791 aa21.07■□□□□ 0.96
RAB40C-206ENST00000561781 CDR1P51861 262 aa21.07■□□□□ 0.96
RAB40C-206ENST00000561781 SLC8A3P57103 927 aa21.07■□□□□ 0.96
RAB40C-206ENST00000561781 TRAF1Q13077 416 aa21.07■□□□□ 0.96
RAB40C-206ENST00000561781 STIM1Q13586 685 aa21.07■□□□□ 0.96
RAB40C-206ENST00000561781 MAGEC3Q8TD91 643 aa21.07■□□□□ 0.96
RAB40C-206ENST00000561781 CLSTN1O94985 981 aa21.07■□□□□ 0.96
RAB40C-206ENST00000561781 ZNF589Q86UQ0 364 aaPredicted RBP21.07■□□□□ 0.96
RAB40C-206ENST00000561781 NSUN7Q8NE18 718 aaKnown RBP21.07■□□□□ 0.96
RAB40C-206ENST00000561781 PHAXQ9H814 394 aaKnown RBP21.07■□□□□ 0.96
RAB40C-206ENST00000561781 GCKP35557 465 aa21.06■□□□□ 0.96
RAB40C-206ENST00000561781 IRX2Q9BZI1 471 aaPredicted RBP21.06■□□□□ 0.96
RAB40C-206ENST00000561781 ITGB4P16144 1822 aa21.06■□□□□ 0.96
RAB40C-206ENST00000561781 A0A1W2PQ27 194 aa21.06■□□□□ 0.96
RAB40C-206ENST00000561781 A0A1W2PQ64 194 aa21.06■□□□□ 0.96
RAB40C-206ENST00000561781 A0A1W2PQD8 194 aa21.06■□□□□ 0.96
RAB40C-206ENST00000561781 CTAGE9A4FU28 777 aa21.06■□□□□ 0.96
RAB40C-206ENST00000561781 ECM2O94769 699 aaPredicted RBP21.06■□□□□ 0.96
RAB40C-206ENST00000561781 MYBL2P10244 700 aa21.06■□□□□ 0.96
RAB40C-206ENST00000561781 GUCY1B3Q02153 619 aa21.06■□□□□ 0.96
RAB40C-206ENST00000561781 RBBP5Q15291 538 aaKnown RBP21.06■□□□□ 0.96
RAB40C-206ENST00000561781 COG1Q8WTW3 980 aa21.06■□□□□ 0.96
RAB40C-206ENST00000561781 NEK1Q96PY6 1258 aa21.06■□□□□ 0.96
RAB40C-206ENST00000561781 CRACR2AQ9BSW2 395 aa21.06■□□□□ 0.96
RAB40C-206ENST00000561781 CPSF2Q9P2I0 782 aaKnown RBP21.06■□□□□ 0.96
RAB40C-206ENST00000561781 ZBTB12Q9Y330 459 aaPredicted RBP21.06■□□□□ 0.96
RAB40C-206ENST00000561781 GRIN2DO15399 1336 aa21.06■□□□□ 0.96
RAB40C-206ENST00000561781 MED23Q9ULK4 1368 aa21.06■□□□□ 0.96
RAB40C-206ENST00000561781 SBF2Q86WG5 1849 aa21.05■□□□□ 0.96
RAB40C-206ENST00000561781 RASSF9O75901 435 aa21.05■□□□□ 0.96
RAB40C-206ENST00000561781 TBX2Q13207 712 aaPredicted RBP21.05■□□□□ 0.96
RAB40C-206ENST00000561781 RCSD1Q6JBY9 416 aa21.05■□□□□ 0.96
RAB40C-206ENST00000561781 TEX13AQ9BXU3 409 aaPredicted RBP21.05■□□□□ 0.96
RAB40C-206ENST00000561781 BCL9O00512 1426 aa21.05■□□□□ 0.96
RAB40C-206ENST00000561781 ZC3H4Q9UPT8 1303 aaKnown RBP21.05■□□□□ 0.96
RAB40C-206ENST00000561781 PFKFB2O60825 505 aa21.05■□□□□ 0.96
RAB40C-206ENST00000561781 PTCD1O75127 700 aaKnown RBP21.05■□□□□ 0.96
RAB40C-206ENST00000561781 GNGT1P63211 74 aa21.05■□□□□ 0.96
RAB40C-206ENST00000561781 ATP2B2Q01814 1243 aa21.05■□□□□ 0.96
RAB40C-206ENST00000561781 CCDC40Q4G0X9 1142 aa21.05■□□□□ 0.96
RAB40C-206ENST00000561781 CCDC148Q8NFR7 591 aa21.05■□□□□ 0.96
RAB40C-206ENST00000561781 LLPHQ9BRT6 129 aaKnown RBP21.05■□□□□ 0.96
RAB40C-206ENST00000561781 DESI2Q9BSY9 194 aa21.05■□□□□ 0.96
RAB40C-206ENST00000561781 LRRC2Q9BYS8 371 aa21.05■□□□□ 0.96
RAB40C-206ENST00000561781 VCPKMTQ9H867 229 aa21.05■□□□□ 0.96
RAB40C-206ENST00000561781 ATP6V0A4Q9HBG4 840 aa21.05■□□□□ 0.96
RAB40C-206ENST00000561781 PTPDC1A2A3K4 754 aa21.04■□□□□ 0.96
RAB40C-206ENST00000561781 CTDNEP1O95476 244 aa21.04■□□□□ 0.96
RAB40C-206ENST00000561781 GGCXP38435 758 aa21.04■□□□□ 0.96
RAB40C-206ENST00000561781 DEFB132Q7Z7B7 95 aa21.04■□□□□ 0.96
RAB40C-206ENST00000561781 AACSQ86V21 672 aa21.04■□□□□ 0.96
RAB40C-206ENST00000561781 SEC62Q99442 399 aaKnown RBP21.04■□□□□ 0.96
RAB40C-206ENST00000561781 ADAMTS7Q9UKP4 1686 aa21.04■□□□□ 0.96
RAB40C-206ENST00000561781 CACNA1FO60840 1977 aa21.04■□□□□ 0.96
RAB40C-206ENST00000561781 PPFIA3O75145 1194 aa21.04■□□□□ 0.96
RAB40C-206ENST00000561781 KRT32Q14532 448 aa21.04■□□□□ 0.96
RAB40C-206ENST00000561781 SNCBQ16143 134 aa21.04■□□□□ 0.96
RAB40C-206ENST00000561781 FSD1Q9BTV5 496 aa21.04■□□□□ 0.96
RAB40C-206ENST00000561781 MRPL44Q9H9J2 332 aaKnown RBP21.04■□□□□ 0.96
RAB40C-206ENST00000561781 DDX20Q9UHI6 824 aaKnown RBP21.04■□□□□ 0.96
RAB40C-206ENST00000561781 SAMM50Q9Y512 469 aa21.04■□□□□ 0.96
RAB40C-206ENST00000561781 BTBD11A6QL63 1104 aa21.03■□□□□ 0.96
RAB40C-206ENST00000561781 MYL5Q02045 173 aa21.03■□□□□ 0.96
RAB40C-206ENST00000561781 MTX1Q13505 466 aa21.03■□□□□ 0.96
RAB40C-206ENST00000561781 KIAA1328Q86T90 577 aa21.03■□□□□ 0.96
RAB40C-206ENST00000561781 PDILTQ8N807 584 aa21.03■□□□□ 0.96
RAB40C-206ENST00000561781 PAGR1Q9BTK6 254 aa21.03■□□□□ 0.96
RAB40C-206ENST00000561781 ERVV-2B6SEH9 535 aa21.03■□□□□ 0.96
RAB40C-206ENST00000561781 NDUFAB1O14561 156 aa21.03■□□□□ 0.96
RAB40C-206ENST00000561781 ZNF202O95125 648 aa21.03■□□□□ 0.96
RAB40C-206ENST00000561781 TLDC1Q6P9B6 456 aa21.03■□□□□ 0.96
RAB40C-206ENST00000561781 CEP57Q86XR8 500 aa21.03■□□□□ 0.96
RAB40C-206ENST00000561781 RTEL1Q9NZ71 1219 aa21.03■□□□□ 0.96
RAB40C-206ENST00000561781 ACTN3Q08043 901 aaPredicted RBP21.02■□□□□ 0.96
RAB40C-206ENST00000561781 NAA25Q14CX7 972 aa21.02■□□□□ 0.96
RAB40C-206ENST00000561781 SF3A1Q15459 793 aaKnown RBP21.02■□□□□ 0.96
RAB40C-206ENST00000561781 TC2NQ8N9U0 490 aa21.02■□□□□ 0.96
RAB40C-206ENST00000561781 PAIP2Q9BPZ3 127 aaKnown RBP21.02■□□□□ 0.96
RAB40C-206ENST00000561781 BATF3Q9NR55 127 aa21.02■□□□□ 0.96
RAB40C-206ENST00000561781 INTS13Q9NVM9 706 aa21.02■□□□□ 0.96
RAB40C-206ENST00000561781 NHSQ6T4R5 1651 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms