RNA–Protein interactions for RNA: ENST00000561660.1

FANCA-206, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-206ENST00000561660 PROCA1Q8NCQ7 364 aaPredicted RBP21.75■■□□□ 1.07
FANCA-206ENST00000561660 PUS7LQ9H0K6 701 aaKnown RBP21.75■■□□□ 1.07
FANCA-206ENST00000561660 DDX60LQ5H9U9 1706 aaKnown RBP21.75■■□□□ 1.07
FANCA-206ENST00000561660 MYH1P12882 1939 aa21.74■■□□□ 1.07
FANCA-206ENST00000561660 BRCA2P51587 3418 aa21.74■■□□□ 1.07
FANCA-206ENST00000561660 ECM2O94769 699 aaPredicted RBP21.74■■□□□ 1.07
FANCA-206ENST00000561660 HDAC1Q13547 482 aaPredicted RBP21.74■■□□□ 1.07
FANCA-206ENST00000561660 PI4K2BQ8TCG2 481 aa21.74■■□□□ 1.07
FANCA-206ENST00000561660 GINM1Q9NU53 330 aa21.74■■□□□ 1.07
FANCA-206ENST00000561660 MCM9Q9NXL9 1143 aa21.74■■□□□ 1.07
FANCA-206ENST00000561660 ZSWIM8A7E2V4 1837 aa21.73■■□□□ 1.07
FANCA-206ENST00000561660 ATAD5Q96QE3 1844 aa21.73■■□□□ 1.07
FANCA-206ENST00000561660 GH2P01242 217 aa21.73■■□□□ 1.07
FANCA-206ENST00000561660 POLR3DP05423 398 aaPredicted RBP21.73■■□□□ 1.07
FANCA-206ENST00000561660 BACE1P56817 501 aa21.73■■□□□ 1.07
FANCA-206ENST00000561660 MTMR2Q13614 643 aa21.73■■□□□ 1.07
FANCA-206ENST00000561660 KBTBD3Q8NAB2 608 aa21.73■■□□□ 1.07
FANCA-206ENST00000561660 GPATCH3Q96I76 525 aa21.73■■□□□ 1.07
FANCA-206ENST00000561660 TRIM47Q96LD4 638 aa21.73■■□□□ 1.07
FANCA-206ENST00000561660 AS3MTQ9HBK9 375 aa21.73■■□□□ 1.07
FANCA-206ENST00000561660 PTCH2Q9Y6C5 1203 aa21.73■■□□□ 1.07
FANCA-206ENST00000561660 SALL3Q9BXA9 1300 aa21.73■■□□□ 1.07
FANCA-206ENST00000561660 SMIM22K7EJ46 135 aa21.72■■□□□ 1.07
FANCA-206ENST00000561660 TTC41PQ6P2S7 1318 aa21.72■■□□□ 1.07
FANCA-206ENST00000561660 PSMC4P43686 418 aa21.71■■□□□ 1.07
FANCA-206ENST00000561660 KIF22Q14807 665 aa21.71■■□□□ 1.07
FANCA-206ENST00000561660 ARHGEF6Q15052 776 aa21.71■■□□□ 1.07
FANCA-206ENST00000561660 CERKLQ49MI3 558 aaPredicted RBP21.71■■□□□ 1.07
FANCA-206ENST00000561660 ANKRD45Q5TZF3 282 aa21.71■■□□□ 1.07
FANCA-206ENST00000561660 ZSCAN25Q6NSZ9 544 aa21.71■■□□□ 1.07
FANCA-206ENST00000561660 EXOC6Q8TAG9 804 aa21.71■■□□□ 1.07
FANCA-206ENST00000561660 USP17L10C9JJH3 530 aa21.7■■□□□ 1.06
FANCA-206ENST00000561660 GUCY1A2P33402 732 aa21.7■■□□□ 1.06
FANCA-206ENST00000561660 SLC44A5Q8NCS7 719 aa21.7■■□□□ 1.06
FANCA-206ENST00000561660 OSBP2Q969R2 916 aa21.7■■□□□ 1.06
FANCA-206ENST00000561660 ARMC5Q96C12 935 aa21.7■■□□□ 1.06
FANCA-206ENST00000561660 ATP8A2Q9NTI2 1148 aa21.7■■□□□ 1.06
FANCA-206ENST00000561660 LOC285556D6RIA3 1793 aa21.69■■□□□ 1.06
FANCA-206ENST00000561660 CYP2D7A0A087X1C5 515 aa21.69■■□□□ 1.06
FANCA-206ENST00000561660 ABCB5Q2M3G0 1257 aa21.69■■□□□ 1.06
FANCA-206ENST00000561660 GCC1Q96CN9 775 aa21.69■■□□□ 1.06
FANCA-206ENST00000561660 DYNLL2Q96FJ2 89 aa21.69■■□□□ 1.06
FANCA-206ENST00000561660 STRBPQ96SI9 672 aaKnown RBP21.69■■□□□ 1.06
FANCA-206ENST00000561660 ASCC2Q9H1I8 757 aaPredicted RBP21.69■■□□□ 1.06
FANCA-206ENST00000561660 SLC4A4Q9Y6R1 1079 aa21.69■■□□□ 1.06
FANCA-206ENST00000561660 NAV1Q8NEY1 1877 aa21.69■■□□□ 1.06
FANCA-206ENST00000561660 C19orf81C9J6K1 198 aa21.68■■□□□ 1.06
FANCA-206ENST00000561660 RNF113AO15541 343 aaKnown RBP21.68■■□□□ 1.06
FANCA-206ENST00000561660 GNRH1P01148 92 aa21.68■■□□□ 1.06
FANCA-206ENST00000561660 MX1P20591 662 aa21.68■■□□□ 1.06
FANCA-206ENST00000561660 OSBPP22059 807 aa21.68■■□□□ 1.06
FANCA-206ENST00000561660 AAMPQ13685 434 aa21.68■■□□□ 1.06
FANCA-206ENST00000561660 SMCR8Q8TEV9 937 aaPredicted RBP21.68■■□□□ 1.06
FANCA-206ENST00000561660 EMILIN3Q9NT22 766 aa21.68■■□□□ 1.06
FANCA-206ENST00000561660 USP17L12C9JPN9 530 aa21.67■■□□□ 1.06
FANCA-206ENST00000561660 USP17L21D6R901 530 aa21.67■■□□□ 1.06
FANCA-206ENST00000561660 GLRX3O76003 335 aaKnown RBP21.67■■□□□ 1.06
FANCA-206ENST00000561660 FMNL1O95466 1100 aaPredicted RBP21.67■■□□□ 1.06
FANCA-206ENST00000561660 MLLT1Q03111 559 aaPredicted RBP21.67■■□□□ 1.06
FANCA-206ENST00000561660 RAB3GAP1Q15042 981 aa21.67■■□□□ 1.06
FANCA-206ENST00000561660 C12orf60Q5U649 245 aa21.67■■□□□ 1.06
FANCA-206ENST00000561660 ANKRD13CQ8N6S4 541 aa21.67■■□□□ 1.06
FANCA-206ENST00000561660 ACER1Q8TDN7 264 aa21.67■■□□□ 1.06
FANCA-206ENST00000561660 SRRDQ9UH36 339 aa21.67■■□□□ 1.06
FANCA-206ENST00000561660 PNMA3Q9UL41 463 aa21.67■■□□□ 1.06
FANCA-206ENST00000561660 SUPT16HQ9Y5B9 1047 aaKnown RBP21.67■■□□□ 1.06
FANCA-206ENST00000561660 TNRC18O15417 2968 aaPredicted RBP21.67■■□□□ 1.06
FANCA-206ENST00000561660 ERC2O15083 957 aa21.66■■□□□ 1.06
FANCA-206ENST00000561660 IGHDP01880 384 aa21.66■■□□□ 1.06
FANCA-206ENST00000561660 HOXA7P31268 230 aaPredicted RBP21.66■■□□□ 1.06
FANCA-206ENST00000561660 CTR9Q6PD62 1173 aa21.66■■□□□ 1.06
FANCA-206ENST00000561660 APPBP2Q92624 585 aa21.66■■□□□ 1.06
FANCA-206ENST00000561660 ZNF333Q96JL9 665 aa21.66■■□□□ 1.06
FANCA-206ENST00000561660 TMOD4Q9NZQ9 345 aa21.66■■□□□ 1.06
FANCA-206ENST00000561660 MKI67P46013 3256 aaKnown RBP21.65■■□□□ 1.06
FANCA-206ENST00000561660 MYH7P12883 1935 aa21.65■■□□□ 1.06
FANCA-206ENST00000561660 GSG1L2A8MUP6 293 aa21.65■■□□□ 1.06
FANCA-206ENST00000561660 M0R2C6 588 aa21.65■■□□□ 1.06
FANCA-206ENST00000561660 PABPC4Q13310 644 aaKnown RBP eCLIP21.65■■□□□ 1.06
FANCA-206ENST00000561660 SEPT2Q15019 361 aa21.65■■□□□ 1.06
FANCA-206ENST00000561660 USP17L2Q6R6M4 530 aa21.65■■□□□ 1.06
FANCA-206ENST00000561660 P2RX7Q99572 595 aaKnown RBP21.65■■□□□ 1.06
FANCA-206ENST00000561660 CABP5Q9NP86 173 aa21.65■■□□□ 1.06
FANCA-206ENST00000561660 STAP2Q9UGK3 403 aa21.65■■□□□ 1.06
FANCA-206ENST00000561660 POTEFA5A3E0 1075 aa21.64■■□□□ 1.05
FANCA-206ENST00000561660 PRMT2P55345 433 aa21.64■■□□□ 1.05
FANCA-206ENST00000561660 FCGRTP55899 365 aa21.64■■□□□ 1.05
FANCA-206ENST00000561660 PRKCZQ05513 592 aa21.64■■□□□ 1.05
FANCA-206ENST00000561660 FAM110CQ1W6H9 321 aa21.64■■□□□ 1.05
FANCA-206ENST00000561660 POTEEQ6S8J3 1075 aa21.64■■□□□ 1.05
FANCA-206ENST00000561660 SMC5Q8IY18 1101 aa21.64■■□□□ 1.05
FANCA-206ENST00000561660 SH3TC2Q8TF17 1288 aa21.64■■□□□ 1.05
FANCA-206ENST00000561660 C12orf42Q96LP6 360 aa21.64■■□□□ 1.05
FANCA-206ENST00000561660 SEC62Q99442 399 aaKnown RBP21.64■■□□□ 1.05
FANCA-206ENST00000561660 GABRQQ9UN88 632 aa21.64■■□□□ 1.05
FANCA-206ENST00000561660 A0A1W2PRG0 241 aa21.63■■□□□ 1.05
FANCA-206ENST00000561660 PEX10O60683 326 aa21.63■■□□□ 1.05
FANCA-206ENST00000561660 ZFYP08048 801 aaPredicted RBP21.63■■□□□ 1.05
FANCA-206ENST00000561660 AKR1B1P15121 316 aa21.63■■□□□ 1.05
FANCA-206ENST00000561660 CDK8P49336 464 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms