RNA–Protein interactions for RNA: ENST00000561609.5

PKM-205, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 1,568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-205ENST00000561609 H3BQV1 296 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 NFKBIEO00221 500 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 NPM3O75607 178 aaKnown RBP13.2□□□□□ -0.3
PKM-205ENST00000561609 RAD17O75943 681 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 DDAH1O94760 285 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 IFNAR1P17181 557 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 GABPAQ06546 454 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 RESTQ13127 1097 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 RTN1Q16799 776 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 CCDC178Q5BJE1 867 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 IFFO2Q5TF58 517 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 RCSD1Q6JBY9 416 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 ZNF444Q8N0Y2 327 aaPredicted RBP13.2□□□□□ -0.3
PKM-205ENST00000561609 FANCBQ8NB91 859 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 IDI2Q9BXS1 227 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 IL17RBQ9NRM6 502 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 ARFGEF1Q9Y6D6 1849 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 LTBP3Q9NS15 1303 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 NMT2O60551 498 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 PPFIA3O75145 1194 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 CALM1P0DP23 149 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 CALM2P0DP24 149 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 CALM3P0DP25 149 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 RBM5P52756 815 aaKnown RBP eCLIP13.2□□□□□ -0.32e-7■■□□□ 11.6
PKM-205ENST00000561609 TROAPQ12815 778 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 NFIAQ12857 509 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 FOXD4L6Q3SYB3 417 aaPredicted RBP13.2□□□□□ -0.3
PKM-205ENST00000561609 CFAP100Q494V2 611 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 FOXD4L3Q6VB84 417 aaPredicted RBP13.2□□□□□ -0.3
PKM-205ENST00000561609 CATIPQ7Z7H3 387 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 DGKHQ86XP1 1220 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 KLHL34Q8N239 644 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 TMEM87AQ8NBN3 555 aa13.2□□□□□ -0.3
PKM-205ENST00000561609 ZSCAN16Q9H4T2 348 aaPredicted RBP13.2□□□□□ -0.3
PKM-205ENST00000561609 PRPF40AO75400 957 aaKnown RBP13.19□□□□□ -0.3
PKM-205ENST00000561609 FMNL1O95466 1100 aaPredicted RBP13.19□□□□□ -0.3
PKM-205ENST00000561609 TSPY3P0CV98 308 aa13.19□□□□□ -0.3
PKM-205ENST00000561609 TSPY8P0CW00 308 aa13.19□□□□□ -0.3
PKM-205ENST00000561609 FERMT3Q86UX7 667 aa13.19□□□□□ -0.3
PKM-205ENST00000561609 NEDD1Q8NHV4 660 aa13.19□□□□□ -0.3
PKM-205ENST00000561609 NUP133Q8WUM0 1156 aa13.19□□□□□ -0.3
PKM-205ENST00000561609 BCS1LQ9Y276 419 aa13.19□□□□□ -0.3
PKM-205ENST00000561609 TCHHQ07283 1943 aa13.18□□□□□ -0.3
PKM-205ENST00000561609 DNM1Q05193 864 aaKnown RBP13.18□□□□□ -0.3
PKM-205ENST00000561609 SSRP1Q08945 709 aaKnown RBP13.18□□□□□ -0.3
PKM-205ENST00000561609 NBPF11Q86T75 865 aa13.18□□□□□ -0.3
PKM-205ENST00000561609 AGBL3Q8NEM8 1001 aa13.18□□□□□ -0.3
PKM-205ENST00000561609 FBXO18Q8NFZ0 1043 aa13.18□□□□□ -0.3
PKM-205ENST00000561609 NLGN2Q8NFZ4 835 aa13.18□□□□□ -0.3
PKM-205ENST00000561609 PHKBQ93100 1093 aa13.18□□□□□ -0.3
PKM-205ENST00000561609 C8orf76Q96K31 380 aa13.18□□□□□ -0.3
PKM-205ENST00000561609 EHD4Q9H223 541 aa13.18□□□□□ -0.3
PKM-205ENST00000561609 RBM28Q9NW13 759 aaKnown RBP13.18□□□□□ -0.3
PKM-205ENST00000561609 FAM198AQ9UFP1 575 aa13.18□□□□□ -0.3
PKM-205ENST00000561609 SWAP70Q9UH65 585 aa13.18□□□□□ -0.3
PKM-205ENST00000561609 HDAC9Q9UKV0 1011 aa13.18□□□□□ -0.3
PKM-205ENST00000561609 CNPY2Q9Y2B0 182 aa13.18□□□□□ -0.3
PKM-205ENST00000561609 SIPA1L1O43166 1804 aa13.18□□□□□ -0.3
PKM-205ENST00000561609 PLIN4Q96Q06 1357 aa13.17□□□□□ -0.3
PKM-205ENST00000561609 MYH15Q9Y2K3 1946 aa13.17□□□□□ -0.3
PKM-205ENST00000561609 HLA-DOAP06340 250 aa13.17□□□□□ -0.3
PKM-205ENST00000561609 NOVP48745 357 aa13.17□□□□□ -0.3
PKM-205ENST00000561609 FOSBP53539 338 aa13.17□□□□□ -0.3
PKM-205ENST00000561609 CXCL9Q07325 125 aa13.17□□□□□ -0.3
PKM-205ENST00000561609 KLHL40Q2TBA0 621 aa13.17□□□□□ -0.3
PKM-205ENST00000561609 ZFPM1Q8IX07 1006 aa13.17□□□□□ -0.3
PKM-205ENST00000561609 CRACR2BQ8N4Y2 399 aaPredicted RBP13.17□□□□□ -0.3
PKM-205ENST00000561609 PRMT6Q96LA8 375 aaPredicted RBP13.17□□□□□ -0.3
PKM-205ENST00000561609 MAP3K14Q99558 947 aa13.17□□□□□ -0.3
PKM-205ENST00000561609 DHX36Q9H2U1 1008 aaKnown RBP13.17□□□□□ -0.3
PKM-205ENST00000561609 SPON1Q9HCB6 807 aa13.17□□□□□ -0.3
PKM-205ENST00000561609 SERPINB13Q9UIV8 391 aa13.17□□□□□ -0.3
PKM-205ENST00000561609 TAOK2Q9UL54 1235 aa13.17□□□□□ -0.3
PKM-205ENST00000561609 COL2A1P02458 1487 aaPredicted RBP13.17□□□□□ -0.3
PKM-205ENST00000561609 MYH8P13535 1937 aa13.16□□□□□ -0.3
PKM-205ENST00000561609 SPDYE2BA6NHP3 402 aa13.16□□□□□ -0.3
PKM-205ENST00000561609 ENTPD3O75355 529 aa13.16□□□□□ -0.3
PKM-205ENST00000561609 SPDYE6P0CI01 402 aa13.16□□□□□ -0.3
PKM-205ENST00000561609 CACNB3P54284 484 aa13.16□□□□□ -0.3
PKM-205ENST00000561609 FUT2Q10981 343 aa13.16□□□□□ -0.3
PKM-205ENST00000561609 CIAPIN1Q6FI81 312 aa13.16□□□□□ -0.3
PKM-205ENST00000561609 USP48Q86UV5 1035 aa13.16□□□□□ -0.3
PKM-205ENST00000561609 MTMR14Q8NCE2 650 aa13.16□□□□□ -0.3
PKM-205ENST00000561609 JDP2Q8WYK2 163 aa13.16□□□□□ -0.3
PKM-205ENST00000561609 ALG1Q9BT22 464 aa13.16□□□□□ -0.3
PKM-205ENST00000561609 SLC26A6Q9BXS9 759 aa13.16□□□□□ -0.3
PKM-205ENST00000561609 TDRD3Q9H7E2 651 aaKnown RBP13.16□□□□□ -0.3
PKM-205ENST00000561609 KAT14Q9H8E8 782 aa13.16□□□□□ -0.3
PKM-205ENST00000561609 GDPD2Q9HCC8 539 aa13.16□□□□□ -0.3
PKM-205ENST00000561609 ZBTB12Q9Y330 459 aaPredicted RBP13.16□□□□□ -0.3
PKM-205ENST00000561609 DDX49Q9Y6V7 483 aaKnown RBP13.16□□□□□ -0.3
PKM-205ENST00000561609 KRT85P78386 507 aa13.15□□□□□ -0.3
PKM-205ENST00000561609 GUCY1B3Q02153 619 aa13.15□□□□□ -0.3
PKM-205ENST00000561609 CSPP1Q1MSJ5 1256 aa13.15□□□□□ -0.3
PKM-205ENST00000561609 FAM173BQ6P4H8 233 aa13.15□□□□□ -0.3
PKM-205ENST00000561609 TRIM22Q8IYM9 498 aa13.15□□□□□ -0.3
PKM-205ENST00000561609 OGFOD1Q8N543 542 aa13.15□□□□□ -0.3
PKM-205ENST00000561609 PNMA1Q8ND90 353 aa13.15□□□□□ -0.3
PKM-205ENST00000561609 WASF1Q92558 559 aa13.15□□□□□ -0.3
PKM-205ENST00000561609 AIFM3Q96NN9 605 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms