RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 KBTBD4Q9NVX7 518 aa5.79□□□□□ -1.48
HERC1-215ENST00000561436 SMARCA4P51532 1647 aa5.78□□□□□ -1.48
HERC1-215ENST00000561436 GFRA2O00451 464 aa5.78□□□□□ -1.48
HERC1-215ENST00000561436 FANCGO15287 622 aa5.78□□□□□ -1.48
HERC1-215ENST00000561436 TLR3O15455 904 aaKnown RBP5.78□□□□□ -1.48
HERC1-215ENST00000561436 GRIN3BO60391 1043 aa5.78□□□□□ -1.48
HERC1-215ENST00000561436 RPS26P62854 115 aaKnown RBP5.78□□□□□ -1.48
HERC1-215ENST00000561436 BNIP3Q12983 259 aa5.78□□□□□ -1.48
HERC1-215ENST00000561436 SLBPQ14493 270 aaKnown RBP eCLIP5.78□□□□□ -1.48
HERC1-215ENST00000561436 CDC37L1Q7L3B6 337 aa5.78□□□□□ -1.48
HERC1-215ENST00000561436 VPS37DQ86XT2 251 aa5.78□□□□□ -1.48
HERC1-215ENST00000561436 DTX1Q86Y01 620 aa5.78□□□□□ -1.48
HERC1-215ENST00000561436 RIN3Q8TB24 985 aa5.78□□□□□ -1.48
HERC1-215ENST00000561436 HEXIM2Q96MH2 286 aaKnown RBP5.78□□□□□ -1.48
HERC1-215ENST00000561436 METTL22Q9BUU2 404 aaPredicted RBP5.78□□□□□ -1.48
HERC1-215ENST00000561436 WNT10AQ9GZT5 417 aa5.78□□□□□ -1.48
HERC1-215ENST00000561436 USP35Q9P2H5 1018 aa5.78□□□□□ -1.48
HERC1-215ENST00000561436 INPP5FQ9Y2H2 1132 aa5.78□□□□□ -1.48
HERC1-215ENST00000561436 OAS3Q9Y6K5 1087 aaKnown RBP5.78□□□□□ -1.48
HERC1-215ENST00000561436 PRAMEF13Q5VWM6 474 aa5.77□□□□□ -1.49
HERC1-215ENST00000561436 INTS5Q6P9B9 1019 aaKnown RBP5.77□□□□□ -1.49
HERC1-215ENST00000561436 ERMP1Q7Z2K6 904 aa5.77□□□□□ -1.49
HERC1-215ENST00000561436 SREK1Q8WXA9 508 aaKnown RBP5.77□□□□□ -1.49
HERC1-215ENST00000561436 RHOVQ96L33 236 aa5.77□□□□□ -1.49
HERC1-215ENST00000561436 TMEM74Q96NL1 305 aa5.77□□□□□ -1.49
HERC1-215ENST00000561436 MIPEPQ99797 713 aa5.77□□□□□ -1.49
HERC1-215ENST00000561436 RSRP1Q9BUV0 290 aa5.77□□□□□ -1.49
HERC1-215ENST00000561436 CAPN10Q9HC96 672 aa5.77□□□□□ -1.49
HERC1-215ENST00000561436 PRDM10Q9NQV6 1147 aa5.77□□□□□ -1.49
HERC1-215ENST00000561436 DDX41Q9UJV9 622 aaKnown RBP5.77□□□□□ -1.49
HERC1-215ENST00000561436 THOC2Q8NI27 1593 aaKnown RBP5.76□□□□□ -1.49
HERC1-215ENST00000561436 WDR62O43379 1518 aa5.76□□□□□ -1.49
HERC1-215ENST00000561436 PRR33A8MZF0 331 aa5.76□□□□□ -1.49
HERC1-215ENST00000561436 SLITRK5O94991 958 aa5.76□□□□□ -1.49
HERC1-215ENST00000561436 GP2P55259 537 aaKnown RBP5.76□□□□□ -1.49
HERC1-215ENST00000561436 RAD51AP2Q09MP3 1159 aa5.76□□□□□ -1.49
HERC1-215ENST00000561436 SNAP47Q5SQN1 464 aa5.76□□□□□ -1.49
HERC1-215ENST00000561436 GOLM1Q8NBJ4 401 aa5.76□□□□□ -1.49
HERC1-215ENST00000561436 ZNF507Q8TCN5 953 aa5.76□□□□□ -1.49
HERC1-215ENST00000561436 SPATA32Q96LK8 384 aa5.76□□□□□ -1.49
HERC1-215ENST00000561436 TJP2Q9UDY2 1190 aa5.76□□□□□ -1.49
HERC1-215ENST00000561436 CCDC39Q9UFE4 941 aa5.76□□□□□ -1.49
HERC1-215ENST00000561436 PLAGL2Q9UPG8 496 aa5.76□□□□□ -1.49
HERC1-215ENST00000561436 FAM221AA4D161 298 aa5.75□□□□□ -1.49
HERC1-215ENST00000561436 UPK3BL1B0FP48 263 aa5.75□□□□□ -1.49
HERC1-215ENST00000561436 UPK3BL2E5RIL1 263 aa5.75□□□□□ -1.49
HERC1-215ENST00000561436 EOMESO95936 686 aa5.75□□□□□ -1.49
HERC1-215ENST00000561436 PGRP06401 933 aa5.75□□□□□ -1.49
HERC1-215ENST00000561436 GARTP22102 1010 aa5.75□□□□□ -1.49
HERC1-215ENST00000561436 OXCT1P55809 520 aa5.75□□□□□ -1.49
HERC1-215ENST00000561436 CYP27A1Q02318 531 aa5.75□□□□□ -1.49
HERC1-215ENST00000561436 LMNB2Q03252 620 aa5.75□□□□□ -1.49
HERC1-215ENST00000561436 CYP27C1Q4G0S4 372 aa5.75□□□□□ -1.49
HERC1-215ENST00000561436 ZNF394Q53GI3 561 aa5.75□□□□□ -1.49
HERC1-215ENST00000561436 FAM214BQ7L5A3 538 aa5.75□□□□□ -1.49
HERC1-215ENST00000561436 WFDC3Q8IUB2 231 aa5.75□□□□□ -1.49
HERC1-215ENST00000561436 DRC1Q96MC2 740 aa5.75□□□□□ -1.49
HERC1-215ENST00000561436 POLR3KQ9Y2Y1 108 aaPredicted RBP5.75□□□□□ -1.49
HERC1-215ENST00000561436 PCDHGB7Q9Y5F8 929 aa5.75□□□□□ -1.49
HERC1-215ENST00000561436 SNCAIPQ9Y6H5 919 aa5.75□□□□□ -1.49
HERC1-215ENST00000561436 WNT11O96014 354 aa5.74□□□□□ -1.49
HERC1-215ENST00000561436 CRKP46108 304 aa5.74□□□□□ -1.49
HERC1-215ENST00000561436 RPL6Q02878 288 aaKnown RBP5.74□□□□□ -1.49
HERC1-215ENST00000561436 FBXL19Q6PCT2 694 aa5.74□□□□□ -1.49
HERC1-215ENST00000561436 ARHGAP27Q6ZUM4 889 aa5.74□□□□□ -1.49
HERC1-215ENST00000561436 SPRED2Q7Z698 418 aa5.74□□□□□ -1.49
HERC1-215ENST00000561436 KIAA0825Q8IV33 1275 aa5.74□□□□□ -1.49
HERC1-215ENST00000561436 ABI1Q8IZP0 508 aa5.74□□□□□ -1.49
HERC1-215ENST00000561436 SLC43A3Q8NBI5 491 aa5.74□□□□□ -1.49
HERC1-215ENST00000561436 FLCNQ8NFG4 579 aa5.74□□□□□ -1.49
HERC1-215ENST00000561436 ACSF2Q96CM8 615 aaPredicted RBP5.74□□□□□ -1.49
HERC1-215ENST00000561436 SPON2Q9BUD6 331 aa5.74□□□□□ -1.49
HERC1-215ENST00000561436 FOXQ1Q9C009 403 aa5.74□□□□□ -1.49
HERC1-215ENST00000561436 ACBD3Q9H3P7 528 aa5.74□□□□□ -1.49
HERC1-215ENST00000561436 ANGEL1Q9UNK9 670 aaKnown RBP5.74□□□□□ -1.49
HERC1-215ENST00000561436 CFTRP13569 1480 aa5.74□□□□□ -1.49
HERC1-215ENST00000561436 CEP164Q9UPV0 1460 aa5.73□□□□□ -1.49
HERC1-215ENST00000561436 DNAJA2O60884 412 aa5.73□□□□□ -1.49
HERC1-215ENST00000561436 CILPO75339 1184 aa5.73□□□□□ -1.49
HERC1-215ENST00000561436 LRIG2O94898 1065 aa5.73□□□□□ -1.49
HERC1-215ENST00000561436 BPNT1O95861 308 aa5.73□□□□□ -1.49
HERC1-215ENST00000561436 ARID5AQ03989 594 aa5.73□□□□□ -1.49
HERC1-215ENST00000561436 SCARA3Q6AZY7 606 aa5.73□□□□□ -1.49
HERC1-215ENST00000561436 CDH24Q86UP0 819 aa5.73□□□□□ -1.49
HERC1-215ENST00000561436 HID1Q8IV36 788 aa5.73□□□□□ -1.49
HERC1-215ENST00000561436 GATAD2BQ8WXI9 593 aa5.73□□□□□ -1.49
HERC1-215ENST00000561436 TMEM87BQ96K49 555 aa5.73□□□□□ -1.49
HERC1-215ENST00000561436 BSDC1Q9NW68 430 aaPredicted RBP5.73□□□□□ -1.49
HERC1-215ENST00000561436 UBP1Q9NZI7 540 aa5.73□□□□□ -1.49
HERC1-215ENST00000561436 ADAMTS1Q9UHI8 967 aa5.73□□□□□ -1.49
HERC1-215ENST00000561436 TPX2Q9ULW0 747 aaKnown RBP5.73□□□□□ -1.49
HERC1-215ENST00000561436 SUPT16HQ9Y5B9 1047 aaKnown RBP5.73□□□□□ -1.49
HERC1-215ENST00000561436 FANCD2Q9BXW9 1451 aa5.72□□□□□ -1.49
HERC1-215ENST00000561436 CBX7O95931 251 aa5.72□□□□□ -1.49
HERC1-215ENST00000561436 CEACAM5P06731 702 aa5.72□□□□□ -1.49
HERC1-215ENST00000561436 PLCG1P19174 1290 aa5.72□□□□□ -1.49
HERC1-215ENST00000561436 EIF4A3P38919 411 aaKnown RBP5.72□□□□□ -1.49
HERC1-215ENST00000561436 CPSF6Q16630 551 aaKnown RBP eCLIP5.72□□□□□ -1.49
HERC1-215ENST00000561436 LETMD1Q6P1Q0 360 aa5.72□□□□□ -1.49
HERC1-215ENST00000561436 TP53INP2Q8IXH6 220 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms