RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 LMCD1Q9NZU5 365 aa8.82□□□□□ -1
HMBOX1-216ENST00000561377 PARP2Q9UGN5 583 aa8.82□□□□□ -1
HMBOX1-216ENST00000561377 GFRA2O00451 464 aa8.81□□□□□ -1
HMBOX1-216ENST00000561377 DAB2P98082 770 aa8.81□□□□□ -1
HMBOX1-216ENST00000561377 XPCQ01831 940 aaPredicted RBP8.81□□□□□ -1
HMBOX1-216ENST00000561377 MEI1Q5TIA1 1274 aa8.81□□□□□ -1
HMBOX1-216ENST00000561377 PRAMEF13Q5VWM6 474 aa8.81□□□□□ -1
HMBOX1-216ENST00000561377 FLAD1Q8NFF5 587 aa8.81□□□□□ -1
HMBOX1-216ENST00000561377 COX4I2Q96KJ9 171 aa8.81□□□□□ -1
HMBOX1-216ENST00000561377 PRDM7Q9NQW5 492 aa8.81□□□□□ -1
HMBOX1-216ENST00000561377 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.81□□□□□ -1
HMBOX1-216ENST00000561377 CYP7A1P22680 504 aa8.8□□□□□ -1
HMBOX1-216ENST00000561377 PDE4BQ07343 736 aa8.8□□□□□ -1
HMBOX1-216ENST00000561377 TAF1CQ15572 869 aaPredicted RBP8.8□□□□□ -1
HMBOX1-216ENST00000561377 NPAS4Q8IUM7 802 aa8.8□□□□□ -1
HMBOX1-216ENST00000561377 TMEM40Q8WWA1 233 aa8.8□□□□□ -1
HMBOX1-216ENST00000561377 NOC4LQ9BVI4 516 aaKnown RBP8.8□□□□□ -1
HMBOX1-216ENST00000561377 PRR33A8MZF0 331 aa8.79□□□□□ -1
HMBOX1-216ENST00000561377 PGRP06401 933 aa8.79□□□□□ -1
HMBOX1-216ENST00000561377 C8AP07357 584 aa8.79□□□□□ -1
HMBOX1-216ENST00000561377 ST13P50502 369 aaKnown RBP8.79□□□□□ -1
HMBOX1-216ENST00000561377 TSNAXIP1Q2TAA8 658 aa8.79□□□□□ -1
HMBOX1-216ENST00000561377 CDKAL1Q5VV42 579 aa8.79□□□□□ -1
HMBOX1-216ENST00000561377 XAGE3Q8WTP9 111 aa8.79□□□□□ -1
HMBOX1-216ENST00000561377 HSPA12BQ96MM6 686 aa8.79□□□□□ -1
HMBOX1-216ENST00000561377 SEMA3GQ9NS98 782 aa8.79□□□□□ -1
HMBOX1-216ENST00000561377 TFE3P19532 575 aaPredicted RBP8.78□□□□□ -1
HMBOX1-216ENST00000561377 KIR3DL1P43629 444 aa8.78□□□□□ -1
HMBOX1-216ENST00000561377 RPL6Q02878 288 aaKnown RBP8.78□□□□□ -1
HMBOX1-216ENST00000561377 MRPL41Q8IXM3 137 aaKnown RBP8.78□□□□□ -1
HMBOX1-216ENST00000561377 RIN3Q8TB24 985 aa8.78□□□□□ -1
HMBOX1-216ENST00000561377 KRTAP9-9Q9BYP9 154 aa8.78□□□□□ -1
HMBOX1-216ENST00000561377 KRTAP9-4Q9BYQ2 154 aa8.78□□□□□ -1
HMBOX1-216ENST00000561377 CAPN6Q9Y6Q1 641 aa8.78□□□□□ -1
HMBOX1-216ENST00000561377 H3BS24 57 aa8.77□□□□□ -1.01
HMBOX1-216ENST00000561377 SLC6A19Q695T7 634 aa8.77□□□□□ -1.01
HMBOX1-216ENST00000561377 DNAJC14Q6Y2X3 702 aaPredicted RBP8.77□□□□□ -1.01
HMBOX1-216ENST00000561377 TMC4Q7Z404 712 aa8.77□□□□□ -1.01
HMBOX1-216ENST00000561377 CARS2Q9HA77 564 aaKnown RBP8.77□□□□□ -1.01
HMBOX1-216ENST00000561377 ATP13A1Q9HD20 1204 aa8.77□□□□□ -1.01
HMBOX1-216ENST00000561377 TJP2Q9UDY2 1190 aa8.77□□□□□ -1.01
HMBOX1-216ENST00000561377 ARID1BQ8NFD5 2236 aaPredicted RBP8.77□□□□□ -1.01
HMBOX1-216ENST00000561377 CNTNAP4Q9C0A0 1308 aa8.77□□□□□ -1.01
HMBOX1-216ENST00000561377 FARP2O94887 1054 aaPredicted RBP8.76□□□□□ -1.01
HMBOX1-216ENST00000561377 CBX7O95931 251 aa8.76□□□□□ -1.01
HMBOX1-216ENST00000561377 FZD5Q13467 585 aa8.76□□□□□ -1.01
HMBOX1-216ENST00000561377 THAP5Q7Z6K1 395 aa8.76□□□□□ -1.01
HMBOX1-216ENST00000561377 ZSWIM9Q86XI8 627 aa8.76□□□□□ -1.01
HMBOX1-216ENST00000561377 TMEM87BQ96K49 555 aa8.76□□□□□ -1.01
HMBOX1-216ENST00000561377 CTNND2Q9UQB3 1225 aa8.76□□□□□ -1.01
HMBOX1-216ENST00000561377 ST14Q9Y5Y6 855 aa8.76□□□□□ -1.01
HMBOX1-216ENST00000561377 USP31Q70CQ4 1352 aa8.75□□□□□ -1.01
HMBOX1-216ENST00000561377 ETV3P41162 512 aa8.75□□□□□ -1.01
HMBOX1-216ENST00000561377 AFMP43652 599 aa8.75□□□□□ -1.01
HMBOX1-216ENST00000561377 KCNMB1Q16558 191 aa8.75□□□□□ -1.01
HMBOX1-216ENST00000561377 CDH24Q86UP0 819 aa8.75□□□□□ -1.01
HMBOX1-216ENST00000561377 JARID2Q92833 1246 aaPredicted RBP8.75□□□□□ -1.01
HMBOX1-216ENST00000561377 ADAM30Q9UKF2 790 aa8.75□□□□□ -1.01
HMBOX1-216ENST00000561377 TLR6Q9Y2C9 796 aa8.75□□□□□ -1.01
HMBOX1-216ENST00000561377 ITGAEP38570 1179 aa8.74□□□□□ -1.01
HMBOX1-216ENST00000561377 ZNF648Q5T619 568 aaPredicted RBP8.74□□□□□ -1.01
HMBOX1-216ENST00000561377 CCDC84Q86UT8 332 aaPredicted RBP8.74□□□□□ -1.01
HMBOX1-216ENST00000561377 MCATQ8IVS2 390 aaKnown RBP8.74□□□□□ -1.01
HMBOX1-216ENST00000561377 PHC3Q8NDX5 983 aa8.74□□□□□ -1.01
HMBOX1-216ENST00000561377 CCDC120Q96HB5 630 aa8.74□□□□□ -1.01
HMBOX1-216ENST00000561377 DPH2Q9BQC3 489 aaPredicted RBP8.74□□□□□ -1.01
HMBOX1-216ENST00000561377 FAM53CQ9NYF3 392 aa8.74□□□□□ -1.01
HMBOX1-216ENST00000561377 BPNT1O95861 308 aa8.73□□□□□ -1.01
HMBOX1-216ENST00000561377 CTSHP09668 335 aa8.73□□□□□ -1.01
HMBOX1-216ENST00000561377 FBXO33Q7Z6M2 555 aa8.73□□□□□ -1.01
HMBOX1-216ENST00000561377 CRELD1Q96HD1 420 aa8.73□□□□□ -1.01
HMBOX1-216ENST00000561377 SORBS3O60504 671 aa8.72□□□□□ -1.01
HMBOX1-216ENST00000561377 PIWIL2Q8TC59 973 aaKnown RBP8.72□□□□□ -1.01
HMBOX1-216ENST00000561377 UBE2FQ969M7 185 aa8.72□□□□□ -1.01
HMBOX1-216ENST00000561377 ACSF2Q96CM8 615 aaPredicted RBP8.72□□□□□ -1.01
HMBOX1-216ENST00000561377 FAM161BQ96MY7 647 aa8.72□□□□□ -1.01
HMBOX1-216ENST00000561377 MRS2Q9HD23 443 aa8.72□□□□□ -1.01
HMBOX1-216ENST00000561377 ERCC3P19447 782 aa8.71□□□□□ -1.02
HMBOX1-216ENST00000561377 JAG1P78504 1218 aa8.71□□□□□ -1.02
HMBOX1-216ENST00000561377 LMNB2Q03252 620 aa8.71□□□□□ -1.02
HMBOX1-216ENST00000561377 TNK2Q07912 1038 aa8.71□□□□□ -1.02
HMBOX1-216ENST00000561377 PKN1Q16512 942 aa8.71□□□□□ -1.02
HMBOX1-216ENST00000561377 KSR1Q8IVT5 923 aa8.71□□□□□ -1.02
HMBOX1-216ENST00000561377 SLC38A3Q99624 504 aa8.71□□□□□ -1.02
HMBOX1-216ENST00000561377 ZSWIM5Q9P217 1185 aa8.71□□□□□ -1.02
HMBOX1-216ENST00000561377 LRRC10BA6NIK2 292 aa8.7□□□□□ -1.02
HMBOX1-216ENST00000561377 PLCG1P19174 1290 aa8.7□□□□□ -1.02
HMBOX1-216ENST00000561377 GDNFP39905 211 aa8.7□□□□□ -1.02
HMBOX1-216ENST00000561377 CAMK2GQ13555 558 aaPredicted RBP8.7□□□□□ -1.02
HMBOX1-216ENST00000561377 PWP1Q13610 501 aa8.7□□□□□ -1.02
HMBOX1-216ENST00000561377 RELL1Q8IUW5 271 aa8.7□□□□□ -1.02
HMBOX1-216ENST00000561377 ALPK1Q96QP1 1244 aa8.7□□□□□ -1.02
HMBOX1-216ENST00000561377 CEP131Q9UPN4 1083 aa8.7□□□□□ -1.02
HMBOX1-216ENST00000561377 CILPO75339 1184 aa8.69□□□□□ -1.02
HMBOX1-216ENST00000561377 BNC2Q6ZN30 1099 aaPredicted RBP8.69□□□□□ -1.02
HMBOX1-216ENST00000561377 TMPRSS7Q7RTY8 843 aa8.69□□□□□ -1.02
HMBOX1-216ENST00000561377 FAM13CQ8NE31 585 aa8.69□□□□□ -1.02
HMBOX1-216ENST00000561377 DNAJB8Q8NHS0 232 aa8.69□□□□□ -1.02
HMBOX1-216ENST00000561377 GATAD2BQ8WXI9 593 aa8.69□□□□□ -1.02
HMBOX1-216ENST00000561377 KIRREL1Q96J84 757 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms