RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 DCP1AQ9NPI6 582 aaPredicted RBP15.34■□□□□ 0.05
CHRNA3-208ENST00000561128 AGTPBP1Q9UPW5 1226 aa15.34■□□□□ 0.05
CHRNA3-208ENST00000561128 USP17L5A8MUK1 530 aa15.33■□□□□ 0.04
CHRNA3-208ENST00000561128 TATDN1Q6P1N9 297 aa15.33■□□□□ 0.04
CHRNA3-208ENST00000561128 POTEEQ6S8J3 1075 aa15.33■□□□□ 0.04
CHRNA3-208ENST00000561128 CLEC10AQ8IUN9 316 aa15.33■□□□□ 0.04
CHRNA3-208ENST00000561128 EXOC6Q8TAG9 804 aa15.33■□□□□ 0.04
CHRNA3-208ENST00000561128 DYNLL2Q96FJ2 89 aa15.33■□□□□ 0.04
CHRNA3-208ENST00000561128 PARK7Q99497 189 aaKnown RBP15.33■□□□□ 0.04
CHRNA3-208ENST00000561128 EHD4Q9H223 541 aa15.33■□□□□ 0.04
CHRNA3-208ENST00000561128 POTEFA5A3E0 1075 aa15.32■□□□□ 0.04
CHRNA3-208ENST00000561128 HLA-DOAP06340 250 aa15.32■□□□□ 0.04
CHRNA3-208ENST00000561128 SH3D19Q5HYK7 790 aa15.32■□□□□ 0.04
CHRNA3-208ENST00000561128 FOXP4Q8IVH2 680 aaPredicted RBP15.32■□□□□ 0.04
CHRNA3-208ENST00000561128 OSBP2Q969R2 916 aa15.32■□□□□ 0.04
CHRNA3-208ENST00000561128 WDR18Q9BV38 432 aa15.32■□□□□ 0.04
CHRNA3-208ENST00000561128 CRNKL1Q9BZJ0 848 aaKnown RBP15.32■□□□□ 0.04
CHRNA3-208ENST00000561128 MCM9Q9NXL9 1143 aa15.32■□□□□ 0.04
CHRNA3-208ENST00000561128 SERPINB13Q9UIV8 391 aa15.32■□□□□ 0.04
CHRNA3-208ENST00000561128 M0R2C6 588 aa15.31■□□□□ 0.04
CHRNA3-208ENST00000561128 OSBPP22059 807 aa15.31■□□□□ 0.04
CHRNA3-208ENST00000561128 FASTKD5Q7L8L6 764 aaKnown RBP15.31■□□□□ 0.04
CHRNA3-208ENST00000561128 KBTBD3Q8NAB2 608 aa15.31■□□□□ 0.04
CHRNA3-208ENST00000561128 ACER1Q8TDN7 264 aa15.31■□□□□ 0.04
CHRNA3-208ENST00000561128 SH3TC2Q8TF17 1288 aa15.31■□□□□ 0.04
CHRNA3-208ENST00000561128 PLXNB2O15031 1838 aa15.31■□□□□ 0.04
CHRNA3-208ENST00000561128 ASNSP08243 561 aa15.3■□□□□ 0.04
CHRNA3-208ENST00000561128 MYH8P13535 1937 aa15.3■□□□□ 0.04
CHRNA3-208ENST00000561128 PSMC4P43686 418 aa15.3■□□□□ 0.04
CHRNA3-208ENST00000561128 UBE3CQ15386 1083 aa15.3■□□□□ 0.04
CHRNA3-208ENST00000561128 ZYXQ15942 572 aaKnown RBP15.3■□□□□ 0.04
CHRNA3-208ENST00000561128 TMED8Q6PL24 325 aaPredicted RBP15.3■□□□□ 0.04
CHRNA3-208ENST00000561128 CERS3Q8IU89 383 aa15.3■□□□□ 0.04
CHRNA3-208ENST00000561128 PROCA1Q8NCQ7 364 aaPredicted RBP15.3■□□□□ 0.04
CHRNA3-208ENST00000561128 ARMC5Q96C12 935 aa15.3■□□□□ 0.04
CHRNA3-208ENST00000561128 ASCC2Q9H1I8 757 aaPredicted RBP15.3■□□□□ 0.04
CHRNA3-208ENST00000561128 EPB41L4AQ9HCS5 686 aaPredicted RBP15.3■□□□□ 0.04
CHRNA3-208ENST00000561128 EMILIN3Q9NT22 766 aa15.3■□□□□ 0.04
CHRNA3-208ENST00000561128 GABRQQ9UN88 632 aa15.3■□□□□ 0.04
CHRNA3-208ENST00000561128 SLC45A1Q9Y2W3 748 aa15.3■□□□□ 0.04
CHRNA3-208ENST00000561128 GREB1LQ9C091 1923 aaPredicted RBP15.29■□□□□ 0.04
CHRNA3-208ENST00000561128 TNRC18O15417 2968 aaPredicted RBP15.29■□□□□ 0.04
CHRNA3-208ENST00000561128 MYCP01106 439 aaPredicted RBP15.29■□□□□ 0.04
CHRNA3-208ENST00000561128 IGHDP01880 384 aa15.29■□□□□ 0.04
CHRNA3-208ENST00000561128 POLR3DP05423 398 aaPredicted RBP15.29■□□□□ 0.04
CHRNA3-208ENST00000561128 BACE1P56817 501 aa15.29■□□□□ 0.04
CHRNA3-208ENST00000561128 PRKCZQ05513 592 aa15.29■□□□□ 0.04
CHRNA3-208ENST00000561128 HDAC1Q13547 482 aaPredicted RBP15.29■□□□□ 0.04
CHRNA3-208ENST00000561128 ANKRD13CQ8N6S4 541 aa15.29■□□□□ 0.04
CHRNA3-208ENST00000561128 SEC62Q99442 399 aaKnown RBP15.29■□□□□ 0.04
CHRNA3-208ENST00000561128 TRIM34Q9BYJ4 488 aa15.29■□□□□ 0.04
CHRNA3-208ENST00000561128 MX1P20591 662 aa15.28■□□□□ 0.04
CHRNA3-208ENST00000561128 SEPT2Q15019 361 aa15.28■□□□□ 0.04
CHRNA3-208ENST00000561128 KIAA1755Q5JYT7 1200 aa15.28■□□□□ 0.04
CHRNA3-208ENST00000561128 TTC6Q86TZ1 520 aa15.28■□□□□ 0.04
CHRNA3-208ENST00000561128 ZNF333Q96JL9 665 aa15.28■□□□□ 0.04
CHRNA3-208ENST00000561128 STRBPQ96SI9 672 aaKnown RBP15.28■□□□□ 0.04
CHRNA3-208ENST00000561128 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.28■□□□□ 0.04
CHRNA3-208ENST00000561128 TXNRD2Q9NNW7 524 aa15.28■□□□□ 0.04
CHRNA3-208ENST00000561128 SLC4A4Q9Y6R1 1079 aa15.28■□□□□ 0.04
CHRNA3-208ENST00000561128 TTC41PQ6P2S7 1318 aa15.27■□□□□ 0.04
CHRNA3-208ENST00000561128 A0A0G2JMZ2 1700 aa15.27■□□□□ 0.04
CHRNA3-208ENST00000561128 A0A1W2PRG0 241 aa15.27■□□□□ 0.04
CHRNA3-208ENST00000561128 USP17L12C9JPN9 530 aa15.27■□□□□ 0.04
CHRNA3-208ENST00000561128 USP17L21D6R901 530 aa15.27■□□□□ 0.04
CHRNA3-208ENST00000561128 FOXP2O15409 715 aa15.27■□□□□ 0.04
CHRNA3-208ENST00000561128 AKR1B1P15121 316 aa15.27■□□□□ 0.04
CHRNA3-208ENST00000561128 IRX6P78412 446 aaPredicted RBP15.27■□□□□ 0.04
CHRNA3-208ENST00000561128 MLLT1Q03111 559 aaPredicted RBP15.27■□□□□ 0.04
CHRNA3-208ENST00000561128 RAB3GAP1Q15042 981 aa15.27■□□□□ 0.04
CHRNA3-208ENST00000561128 ABCB5Q2M3G0 1257 aa15.27■□□□□ 0.04
CHRNA3-208ENST00000561128 CERKLQ49MI3 558 aaPredicted RBP15.27■□□□□ 0.04
CHRNA3-208ENST00000561128 ANKRD45Q5TZF3 282 aa15.27■□□□□ 0.04
CHRNA3-208ENST00000561128 C12orf60Q5U649 245 aa15.27■□□□□ 0.04
CHRNA3-208ENST00000561128 SMCR8Q8TEV9 937 aaPredicted RBP15.27■□□□□ 0.04
CHRNA3-208ENST00000561128 APPBP2Q92624 585 aa15.27■□□□□ 0.04
CHRNA3-208ENST00000561128 AS3MTQ9HBK9 375 aa15.27■□□□□ 0.04
CHRNA3-208ENST00000561128 SRRDQ9UH36 339 aa15.27■□□□□ 0.04
CHRNA3-208ENST00000561128 SUPT16HQ9Y5B9 1047 aaKnown RBP15.27■□□□□ 0.04
CHRNA3-208ENST00000561128 RLFQ13129 1914 aa15.27■□□□□ 0.03
CHRNA3-208ENST00000561128 MYPNQ86TC9 1320 aa15.26■□□□□ 0.03
CHRNA3-208ENST00000561128 GSG1L2A8MUP6 293 aa15.26■□□□□ 0.03
CHRNA3-208ENST00000561128 USP17L10C9JJH3 530 aa15.26■□□□□ 0.03
CHRNA3-208ENST00000561128 RNF113AO15541 343 aaKnown RBP15.26■□□□□ 0.03
CHRNA3-208ENST00000561128 FMNL1O95466 1100 aaPredicted RBP15.26■□□□□ 0.03
CHRNA3-208ENST00000561128 CTR9Q6PD62 1173 aa15.26■□□□□ 0.03
CHRNA3-208ENST00000561128 SIAH1Q8IUQ4 282 aa15.26■□□□□ 0.03
CHRNA3-208ENST00000561128 GPATCH3Q96I76 525 aa15.26■□□□□ 0.03
CHRNA3-208ENST00000561128 P2RX7Q99572 595 aaKnown RBP15.26■□□□□ 0.03
CHRNA3-208ENST00000561128 TBC1D2Q9BYX2 928 aa15.26■□□□□ 0.03
CHRNA3-208ENST00000561128 PARP14Q460N5 1801 aa15.26■□□□□ 0.03
CHRNA3-208ENST00000561128 GPAA1O43292 621 aa15.25■□□□□ 0.03
CHRNA3-208ENST00000561128 KIF22Q14807 665 aa15.25■□□□□ 0.03
CHRNA3-208ENST00000561128 MTFR1Q15390 333 aa15.25■□□□□ 0.03
CHRNA3-208ENST00000561128 SLC9C1Q4G0N8 1177 aa15.25■□□□□ 0.03
CHRNA3-208ENST00000561128 CCDC129Q6ZRS4 1044 aa15.25■□□□□ 0.03
CHRNA3-208ENST00000561128 STK11IPQ8N1F8 1099 aa15.25■□□□□ 0.03
CHRNA3-208ENST00000561128 LNPKQ9C0E8 428 aa15.25■□□□□ 0.03
CHRNA3-208ENST00000561128 ATP8A2Q9NTI2 1148 aa15.25■□□□□ 0.03
CHRNA3-208ENST00000561128 CENPFP49454 3210 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms