RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 RAB11FIP4Q86YS3 637 aa19.96■□□□□ 0.79
HDDC3-206ENST00000561036 NIM1KQ8IY84 436 aa19.96■□□□□ 0.79
HDDC3-206ENST00000561036 WASF1Q92558 559 aa19.96■□□□□ 0.79
HDDC3-206ENST00000561036 FMNL1O95466 1100 aaPredicted RBP19.95■□□□□ 0.78
HDDC3-206ENST00000561036 RASA1P20936 1047 aa19.95■□□□□ 0.78
HDDC3-206ENST00000561036 SSRP1Q08945 709 aaKnown RBP19.95■□□□□ 0.78
HDDC3-206ENST00000561036 C8orf76Q96K31 380 aa19.95■□□□□ 0.78
HDDC3-206ENST00000561036 MAP3K14Q99558 947 aa19.95■□□□□ 0.78
HDDC3-206ENST00000561036 MYL10Q9BUA6 226 aa19.95■□□□□ 0.78
HDDC3-206ENST00000561036 IDI2Q9BXS1 227 aa19.95■□□□□ 0.78
HDDC3-206ENST00000561036 OSBPL5Q9H0X9 879 aaPredicted RBP19.95■□□□□ 0.78
HDDC3-206ENST00000561036 TAOK3Q9H2K8 898 aa19.95■□□□□ 0.78
HDDC3-206ENST00000561036 SWAP70Q9UH65 585 aa19.95■□□□□ 0.78
HDDC3-206ENST00000561036 ECM29Q5VYK3 1845 aa19.95■□□□□ 0.78
HDDC3-206ENST00000561036 MBD3O95983 291 aa19.94■□□□□ 0.78
HDDC3-206ENST00000561036 TSPY3P0CV98 308 aa19.94■□□□□ 0.78
HDDC3-206ENST00000561036 TSPY8P0CW00 308 aa19.94■□□□□ 0.78
HDDC3-206ENST00000561036 RXRAP19793 462 aa19.94■□□□□ 0.78
HDDC3-206ENST00000561036 MMP14P50281 582 aa19.94■□□□□ 0.78
HDDC3-206ENST00000561036 KRT85P78386 507 aa19.94■□□□□ 0.78
HDDC3-206ENST00000561036 GABPAQ06546 454 aa19.94■□□□□ 0.78
HDDC3-206ENST00000561036 ATL3Q6DD88 541 aa19.94■□□□□ 0.78
HDDC3-206ENST00000561036 TRIM22Q8IYM9 498 aa19.94■□□□□ 0.78
HDDC3-206ENST00000561036 FBXO18Q8NFZ0 1043 aa19.94■□□□□ 0.78
HDDC3-206ENST00000561036 GMLQ99445 158 aa19.94■□□□□ 0.78
HDDC3-206ENST00000561036 DHX36Q9H2U1 1008 aaKnown RBP19.94■□□□□ 0.78
HDDC3-206ENST00000561036 DDX49Q9Y6V7 483 aaKnown RBP19.94■□□□□ 0.78
HDDC3-206ENST00000561036 LTBP3Q9NS15 1303 aa19.94■□□□□ 0.78
HDDC3-206ENST00000561036 FER1L6Q2WGJ9 1857 aa19.94■□□□□ 0.78
HDDC3-206ENST00000561036 HLA-DOAP06340 250 aa19.93■□□□□ 0.78
HDDC3-206ENST00000561036 NCLP19338 710 aaKnown RBP19.93■□□□□ 0.78
HDDC3-206ENST00000561036 RBM5P52756 815 aaKnown RBP eCLIP19.93■□□□□ 0.78
HDDC3-206ENST00000561036 TROAPQ12815 778 aa19.93■□□□□ 0.78
HDDC3-206ENST00000561036 PICALMQ13492 652 aa19.93■□□□□ 0.78
HDDC3-206ENST00000561036 RCSD1Q6JBY9 416 aa19.93■□□□□ 0.78
HDDC3-206ENST00000561036 CCDC144CPQ8IYA2 1237 aa19.93■□□□□ 0.78
HDDC3-206ENST00000561036 AGBL3Q8NEM8 1001 aa19.93■□□□□ 0.78
HDDC3-206ENST00000561036 NEDD1Q8NHV4 660 aa19.93■□□□□ 0.78
HDDC3-206ENST00000561036 EHD4Q9H223 541 aa19.93■□□□□ 0.78
HDDC3-206ENST00000561036 DDX4Q9NQI0 724 aaKnown RBP19.93■□□□□ 0.78
HDDC3-206ENST00000561036 HDAC9Q9UKV0 1011 aa19.93■□□□□ 0.78
HDDC3-206ENST00000561036 DNM1Q05193 864 aaKnown RBP19.92■□□□□ 0.78
HDDC3-206ENST00000561036 SLC4A8Q2Y0W8 1093 aa19.92■□□□□ 0.78
HDDC3-206ENST00000561036 USP48Q86UV5 1035 aa19.92■□□□□ 0.78
HDDC3-206ENST00000561036 FERMT3Q86UX7 667 aa19.92■□□□□ 0.78
HDDC3-206ENST00000561036 CRACR2BQ8N4Y2 399 aaPredicted RBP19.92■□□□□ 0.78
HDDC3-206ENST00000561036 NUP133Q8WUM0 1156 aa19.92■□□□□ 0.78
HDDC3-206ENST00000561036 CHAMP1Q96JM3 812 aa19.92■□□□□ 0.78
HDDC3-206ENST00000561036 ALG1Q9BT22 464 aa19.92■□□□□ 0.78
HDDC3-206ENST00000561036 IL17RBQ9NRM6 502 aa19.92■□□□□ 0.78
HDDC3-206ENST00000561036 PPP1R1BQ9UD71 204 aaPredicted RBP19.92■□□□□ 0.78
HDDC3-206ENST00000561036 CNPY2Q9Y2B0 182 aa19.92■□□□□ 0.78
HDDC3-206ENST00000561036 ADAMTSL1Q8N6G6 1762 aa19.92■□□□□ 0.78
HDDC3-206ENST00000561036 PLIN4Q96Q06 1357 aa19.92■□□□□ 0.78
HDDC3-206ENST00000561036 PSDA5PKW4 1024 aaPredicted RBP19.91■□□□□ 0.78
HDDC3-206ENST00000561036 PSMD14O00487 310 aa19.91■□□□□ 0.78
HDDC3-206ENST00000561036 GSE1Q14687 1217 aa19.91■□□□□ 0.78
HDDC3-206ENST00000561036 CFAP100Q494V2 611 aa19.91■□□□□ 0.78
HDDC3-206ENST00000561036 SLC44A5Q8NCS7 719 aa19.91■□□□□ 0.78
HDDC3-206ENST00000561036 RNF26Q9BY78 433 aaPredicted RBP19.91■□□□□ 0.78
HDDC3-206ENST00000561036 SCAND2PQ9GZW5 306 aaPredicted RBP19.91■□□□□ 0.78
HDDC3-206ENST00000561036 KAT14Q9H8E8 782 aa19.91■□□□□ 0.78
HDDC3-206ENST00000561036 SERPINB13Q9UIV8 391 aa19.91■□□□□ 0.78
HDDC3-206ENST00000561036 COL2A1P02458 1487 aaPredicted RBP19.91■□□□□ 0.78
HDDC3-206ENST00000561036 COL4A5P29400 1685 aa19.91■□□□□ 0.78
HDDC3-206ENST00000561036 NMT2O60551 498 aa19.9■□□□□ 0.78
HDDC3-206ENST00000561036 ENTPD3O75355 529 aa19.9■□□□□ 0.78
HDDC3-206ENST00000561036 RAD17O75943 681 aa19.9■□□□□ 0.78
HDDC3-206ENST00000561036 DEXIO95424 95 aa19.9■□□□□ 0.78
HDDC3-206ENST00000561036 KIF5BP33176 963 aa19.9■□□□□ 0.78
HDDC3-206ENST00000561036 NOVP48745 357 aa19.9■□□□□ 0.78
HDDC3-206ENST00000561036 FOXD4L6Q3SYB3 417 aaPredicted RBP19.9■□□□□ 0.78
HDDC3-206ENST00000561036 FOXD4L3Q6VB84 417 aaPredicted RBP19.9■□□□□ 0.78
HDDC3-206ENST00000561036 NBPF11Q86T75 865 aa19.9■□□□□ 0.78
HDDC3-206ENST00000561036 OGFOD1Q8N543 542 aa19.9■□□□□ 0.78
HDDC3-206ENST00000561036 MTMR14Q8NCE2 650 aa19.9■□□□□ 0.78
HDDC3-206ENST00000561036 CTCFLQ8NI51 663 aaPredicted RBP19.9■□□□□ 0.78
HDDC3-206ENST00000561036 JDP2Q8WYK2 163 aa19.9■□□□□ 0.78
HDDC3-206ENST00000561036 SLC26A6Q9BXS9 759 aa19.9■□□□□ 0.78
HDDC3-206ENST00000561036 ELP1O95163 1332 aa19.9■□□□□ 0.78
HDDC3-206ENST00000561036 TRIM29Q14134 588 aa19.89■□□□□ 0.77
HDDC3-206ENST00000561036 PPP4R3BQ5MIZ7 849 aa19.89■□□□□ 0.77
HDDC3-206ENST00000561036 BRAPQ7Z569 592 aa19.89■□□□□ 0.77
HDDC3-206ENST00000561036 PHKBQ93100 1093 aa19.89■□□□□ 0.77
HDDC3-206ENST00000561036 ZNF396Q96N95 335 aaPredicted RBP19.89■□□□□ 0.77
HDDC3-206ENST00000561036 CFAP45Q9UL16 551 aa19.89■□□□□ 0.77
HDDC3-206ENST00000561036 NFKBIEO00221 500 aa19.88■□□□□ 0.77
HDDC3-206ENST00000561036 PRPF3O43395 683 aaKnown RBP19.88■□□□□ 0.77
HDDC3-206ENST00000561036 GNAQP50148 359 aa19.88■□□□□ 0.77
HDDC3-206ENST00000561036 UBE2HP62256 183 aa19.88■□□□□ 0.77
HDDC3-206ENST00000561036 FUT2Q10981 343 aa19.88■□□□□ 0.77
HDDC3-206ENST00000561036 NFIAQ12857 509 aa19.88■□□□□ 0.77
HDDC3-206ENST00000561036 TNIP1Q15025 636 aa19.88■□□□□ 0.77
HDDC3-206ENST00000561036 TMTC3Q6ZXV5 915 aa19.88■□□□□ 0.77
HDDC3-206ENST00000561036 CCDC17Q96LX7 622 aa19.88■□□□□ 0.77
HDDC3-206ENST00000561036 FAM198AQ9UFP1 575 aa19.88■□□□□ 0.77
HDDC3-206ENST00000561036 BCS1LQ9Y276 419 aa19.88■□□□□ 0.77
HDDC3-206ENST00000561036 ATRNL1Q5VV63 1379 aa19.87■□□□□ 0.77
HDDC3-206ENST00000561036 SPDYE2BA6NHP3 402 aa19.87■□□□□ 0.77
HDDC3-206ENST00000561036 FIBPO43427 364 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms