RNA–Protein interactions for RNA: ENST00000560808.1

NEO1-211, Transcript of neogenin 1, humanhuman

TSL 3

Gene NEO1, Length 1,046 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-211ENST00000560808 GDF11O95390 407 aa11.68□□□□□ -0.54
NEO1-211ENST00000560808 HMGCRP04035 888 aa11.68□□□□□ -0.54
NEO1-211ENST00000560808 HLA-DOAP06340 250 aa11.68□□□□□ -0.54
NEO1-211ENST00000560808 SHROOM1Q2M3G4 852 aaPredicted RBP11.68□□□□□ -0.54
NEO1-211ENST00000560808 NECAB2Q7Z6G3 386 aa11.68□□□□□ -0.54
NEO1-211ENST00000560808 CCAR1Q8IX12 1150 aaKnown RBP11.68□□□□□ -0.54
NEO1-211ENST00000560808 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.68□□□□□ -0.54
NEO1-211ENST00000560808 DNAJC18Q9H819 358 aa11.68□□□□□ -0.54
NEO1-211ENST00000560808 HMX1Q9NP08 348 aaPredicted RBP11.68□□□□□ -0.54
NEO1-211ENST00000560808 GINM1Q9NU53 330 aa11.68□□□□□ -0.54
NEO1-211ENST00000560808 MORF4L1Q9UBU8 362 aa11.68□□□□□ -0.54
NEO1-211ENST00000560808 COL2A1P02458 1487 aaPredicted RBP11.68□□□□□ -0.54
NEO1-211ENST00000560808 RPTORQ8N122 1335 aa11.67□□□□□ -0.54
NEO1-211ENST00000560808 RLBP1P12271 317 aa11.67□□□□□ -0.54
NEO1-211ENST00000560808 CYP2B6P20813 491 aa11.67□□□□□ -0.54
NEO1-211ENST00000560808 USP5P45974 858 aa11.67□□□□□ -0.54
NEO1-211ENST00000560808 HERVK_113P62684 666 aa11.67□□□□□ -0.54
NEO1-211ENST00000560808 HNRNPUQ00839 825 aaKnown RBP eCLIP11.67□□□□□ -0.54
NEO1-211ENST00000560808 TRIM32Q13049 653 aa11.67□□□□□ -0.54
NEO1-211ENST00000560808 Q3C1V9 767 aa11.67□□□□□ -0.54
NEO1-211ENST00000560808 MAGEB6Q8N7X4 407 aa11.67□□□□□ -0.54
NEO1-211ENST00000560808 MIGA1Q8NAN2 632 aa11.67□□□□□ -0.54
NEO1-211ENST00000560808 TXNRD2Q9NNW7 524 aa11.67□□□□□ -0.54
NEO1-211ENST00000560808 EMILIN3Q9NT22 766 aa11.67□□□□□ -0.54
NEO1-211ENST00000560808 TLR7Q9NYK1 1049 aaKnown RBP11.67□□□□□ -0.54
NEO1-211ENST00000560808 RBPJLQ9UBG7 517 aa11.67□□□□□ -0.54
NEO1-211ENST00000560808 ZBTB21Q9ULJ3 1066 aa11.67□□□□□ -0.54
NEO1-211ENST00000560808 CEP290O15078 2479 aa11.67□□□□□ -0.54
NEO1-211ENST00000560808 RBBP6Q7Z6E9 1792 aaKnown RBP11.67□□□□□ -0.54
NEO1-211ENST00000560808 GH2P01242 217 aa11.66□□□□□ -0.54
NEO1-211ENST00000560808 USP17L2Q6R6M4 530 aa11.66□□□□□ -0.54
NEO1-211ENST00000560808 DIS3LQ8TF46 1054 aaKnown RBP11.66□□□□□ -0.54
NEO1-211ENST00000560808 NUDT12Q9BQG2 462 aa11.66□□□□□ -0.54
NEO1-211ENST00000560808 PRO3102Q9H379 93 aa11.66□□□□□ -0.54
NEO1-211ENST00000560808 RNF216Q9NWF9 866 aaPredicted RBP11.66□□□□□ -0.54
NEO1-211ENST00000560808 STAP2Q9UGK3 403 aa11.66□□□□□ -0.54
NEO1-211ENST00000560808 NDUFB9Q9Y6M9 179 aa11.66□□□□□ -0.54
NEO1-211ENST00000560808 MYH2Q9UKX2 1941 aa11.66□□□□□ -0.54
NEO1-211ENST00000560808 XRCC5P13010 732 aaKnown RBP11.65□□□□□ -0.54
NEO1-211ENST00000560808 MAPK4P31152 587 aa11.65□□□□□ -0.54
NEO1-211ENST00000560808 MAP3K12Q12852 859 aa11.65□□□□□ -0.54
NEO1-211ENST00000560808 TTC6Q86TZ1 520 aa11.65□□□□□ -0.54
NEO1-211ENST00000560808 AACSQ86V21 672 aa11.65□□□□□ -0.54
NEO1-211ENST00000560808 CERS3Q8IU89 383 aa11.65□□□□□ -0.54
NEO1-211ENST00000560808 ANKLE1Q8NAG6 615 aa11.65□□□□□ -0.54
NEO1-211ENST00000560808 TRIB2Q92519 343 aa11.65□□□□□ -0.54
NEO1-211ENST00000560808 NBPF3Q9H094 633 aa11.65□□□□□ -0.54
NEO1-211ENST00000560808 ANTXR1Q9H6X2 564 aa11.65□□□□□ -0.54
NEO1-211ENST00000560808 SERPINB13Q9UIV8 391 aa11.65□□□□□ -0.54
NEO1-211ENST00000560808 PRKAR2AP13861 404 aaKnown RBP11.64□□□□□ -0.55
NEO1-211ENST00000560808 ERVK-9P63128 1117 aa11.64□□□□□ -0.55
NEO1-211ENST00000560808 ERVK-24P63145 666 aa11.64□□□□□ -0.55
NEO1-211ENST00000560808 PDE3AQ14432 1141 aa11.64□□□□□ -0.55
NEO1-211ENST00000560808 RAB3GAP1Q15042 981 aa11.64□□□□□ -0.55
NEO1-211ENST00000560808 ZYXQ15942 572 aaKnown RBP11.64□□□□□ -0.55
NEO1-211ENST00000560808 CERKLQ49MI3 558 aaPredicted RBP11.64□□□□□ -0.55
NEO1-211ENST00000560808 TATDN1Q6P1N9 297 aa11.64□□□□□ -0.55
NEO1-211ENST00000560808 CEP85Q6P2H3 762 aa11.64□□□□□ -0.55
NEO1-211ENST00000560808 POTEEQ6S8J3 1075 aa11.64□□□□□ -0.55
NEO1-211ENST00000560808 ERC1Q8IUD2 1116 aa11.64□□□□□ -0.55
NEO1-211ENST00000560808 SOCS4Q8WXH5 440 aa11.64□□□□□ -0.55
NEO1-211ENST00000560808 FEZ1Q99689 392 aa11.64□□□□□ -0.55
NEO1-211ENST00000560808 PAGR1Q9BTK6 254 aa11.64□□□□□ -0.55
NEO1-211ENST00000560808 PORCNQ9H237 461 aa11.64□□□□□ -0.55
NEO1-211ENST00000560808 EXOC6BQ9Y2D4 811 aa11.64□□□□□ -0.55
NEO1-211ENST00000560808 TRIOBPQ9H2D6 2365 aa11.64□□□□□ -0.55
NEO1-211ENST00000560808 USP17L15C9J2P7 530 aa11.63□□□□□ -0.55
NEO1-211ENST00000560808 USP17L13C9JLJ4 530 aa11.63□□□□□ -0.55
NEO1-211ENST00000560808 USP17L11C9JVI0 530 aa11.63□□□□□ -0.55
NEO1-211ENST00000560808 USP17L18D6R9N7 530 aa11.63□□□□□ -0.55
NEO1-211ENST00000560808 USP17L22D6RA61 530 aa11.63□□□□□ -0.55
NEO1-211ENST00000560808 USP17L17D6RBQ6 530 aa11.63□□□□□ -0.55
NEO1-211ENST00000560808 USP17L19D6RCP7 530 aa11.63□□□□□ -0.55
NEO1-211ENST00000560808 USP17L20D6RJB6 530 aa11.63□□□□□ -0.55
NEO1-211ENST00000560808 USP17L24Q0WX57 530 aa11.63□□□□□ -0.55
NEO1-211ENST00000560808 ABCB5Q2M3G0 1257 aa11.63□□□□□ -0.55
NEO1-211ENST00000560808 MAP3K21Q5TCX8 1036 aa11.63□□□□□ -0.55
NEO1-211ENST00000560808 TMED8Q6PL24 325 aaPredicted RBP11.63□□□□□ -0.55
NEO1-211ENST00000560808 GPR142Q7Z601 462 aa11.63□□□□□ -0.55
NEO1-211ENST00000560808 PLEKHH3Q7Z736 793 aa11.63□□□□□ -0.55
NEO1-211ENST00000560808 TRMT44Q8IYL2 757 aaKnown RBP11.63□□□□□ -0.55
NEO1-211ENST00000560808 C7orf61Q8IZ16 206 aa11.63□□□□□ -0.55
NEO1-211ENST00000560808 MIER1Q8N108 512 aa11.63□□□□□ -0.55
NEO1-211ENST00000560808 PANK1Q8TE04 598 aa11.63□□□□□ -0.55
NEO1-211ENST00000560808 GTF3C2Q8WUA4 911 aaPredicted RBP11.63□□□□□ -0.55
NEO1-211ENST00000560808 EHD4Q9H223 541 aa11.63□□□□□ -0.55
NEO1-211ENST00000560808 CWC22Q9HCG8 908 aaKnown RBP11.63□□□□□ -0.55
NEO1-211ENST00000560808 CABP5Q9NP86 173 aa11.63□□□□□ -0.55
NEO1-211ENST00000560808 OGDHLQ9ULD0 1010 aa11.63□□□□□ -0.55
NEO1-211ENST00000560808 MYH13Q9UKX3 1938 aa11.62□□□□□ -0.55
NEO1-211ENST00000560808 MAGEB6P1A0A0J9YX57 407 aa11.62□□□□□ -0.55
NEO1-211ENST00000560808 A0A1W2PPC1 479 aa11.62□□□□□ -0.55
NEO1-211ENST00000560808 POLR3DP05423 398 aaPredicted RBP11.62□□□□□ -0.55
NEO1-211ENST00000560808 ZKSCAN1P17029 563 aaPredicted RBP11.62□□□□□ -0.55
NEO1-211ENST00000560808 RGS2P41220 211 aa11.62□□□□□ -0.55
NEO1-211ENST00000560808 MNX1P50219 401 aaPredicted RBP11.62□□□□□ -0.55
NEO1-211ENST00000560808 PLCD1P51178 756 aa11.62□□□□□ -0.55
NEO1-211ENST00000560808 USP14P54578 494 aa11.62□□□□□ -0.55
NEO1-211ENST00000560808 CCNA1P78396 465 aa11.62□□□□□ -0.55
NEO1-211ENST00000560808 CACNB2Q08289 660 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms