RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-208ENST00000560734 PRDM1O75626 825 aa29.06■■■□□ 2.24
SHF-208ENST00000560734 POLR3DP05423 398 aaPredicted RBP29.06■■■□□ 2.24
SHF-208ENST00000560734 USP17L8P0C7I0 530 aa29.06■■■□□ 2.24
SHF-208ENST00000560734 ME1P48163 572 aa29.06■■■□□ 2.24
SHF-208ENST00000560734 CEBPZQ03701 1054 aaKnown RBP29.06■■■□□ 2.24
SHF-208ENST00000560734 STK38Q15208 465 aa29.06■■■□□ 2.24
SHF-208ENST00000560734 CCDC73Q6ZRK6 1079 aa29.06■■■□□ 2.24
SHF-208ENST00000560734 CCAR1Q8IX12 1150 aaKnown RBP29.06■■■□□ 2.24
SHF-208ENST00000560734 NUP133Q8WUM0 1156 aa29.06■■■□□ 2.24
SHF-208ENST00000560734 EYA3Q99504 573 aa29.06■■■□□ 2.24
SHF-208ENST00000560734 FOXP1Q9H334 677 aaPredicted RBP29.06■■■□□ 2.24
SHF-208ENST00000560734 COL11A2P13942 1736 aaPredicted RBP29.05■■■□□ 2.24
SHF-208ENST00000560734 ESPNB1AK53 854 aa29.05■■■□□ 2.24
SHF-208ENST00000560734 PRPF3O43395 683 aaKnown RBP29.05■■■□□ 2.24
SHF-208ENST00000560734 MMP1P03956 469 aa29.05■■■□□ 2.24
SHF-208ENST00000560734 CYP2D6P10635 497 aa29.05■■■□□ 2.24
SHF-208ENST00000560734 BTDP43251 543 aa29.05■■■□□ 2.24
SHF-208ENST00000560734 FAM160A1Q05DH4 1040 aa29.05■■■□□ 2.24
SHF-208ENST00000560734 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.05■■■□□ 2.24
SHF-208ENST00000560734 FTOQ9C0B1 505 aaKnown RBP eCLIP29.05■■■□□ 2.24
SHF-208ENST00000560734 GJB4Q9NTQ9 266 aa29.05■■■□□ 2.24
SHF-208ENST00000560734 SPTLC2O15270 562 aa29.04■■■□□ 2.24
SHF-208ENST00000560734 FUT2Q10981 343 aa29.04■■■□□ 2.24
SHF-208ENST00000560734 DPP8Q6V1X1 898 aaPredicted RBP29.04■■■□□ 2.24
SHF-208ENST00000560734 PCDHA7Q9UN72 937 aa29.04■■■□□ 2.24
SHF-208ENST00000560734 CAVIN2O95810 425 aa29.03■■■□□ 2.24
SHF-208ENST00000560734 XBP1P17861 261 aa29.03■■■□□ 2.24
SHF-208ENST00000560734 GNL2Q13823 731 aaKnown RBP29.03■■■□□ 2.24
SHF-208ENST00000560734 SLC39A14Q15043 492 aa29.03■■■□□ 2.24
SHF-208ENST00000560734 ENGASEQ8NFI3 743 aa29.03■■■□□ 2.24
SHF-208ENST00000560734 CLIC4Q9Y696 253 aa29.03■■■□□ 2.24
SHF-208ENST00000560734 TSPY2A6NKD2 308 aa29.03■■■□□ 2.24
SHF-208ENST00000560734 PPP6R2O75170 966 aa29.03■■■□□ 2.24
SHF-208ENST00000560734 AKAP17AQ02040 695 aaKnown RBP29.03■■■□□ 2.24
SHF-208ENST00000560734 SF3A1Q15459 793 aaKnown RBP29.03■■■□□ 2.24
SHF-208ENST00000560734 TPRNQ4KMQ1 711 aa29.03■■■□□ 2.24
SHF-208ENST00000560734 DDX60LQ5H9U9 1706 aaKnown RBP29.03■■■□□ 2.24
SHF-208ENST00000560734 JMYQ8N9B5 988 aa29.03■■■□□ 2.24
SHF-208ENST00000560734 TGFBRAP1Q8WUH2 860 aa29.03■■■□□ 2.24
SHF-208ENST00000560734 MRPS27Q92552 414 aaKnown RBP29.03■■■□□ 2.24
SHF-208ENST00000560734 SLC15A2Q16348 729 aa29.02■■■□□ 2.24
SHF-208ENST00000560734 RHBDL3P58872 404 aa29.01■■■□□ 2.23
SHF-208ENST00000560734 SNW1Q13573 536 aaKnown RBP29.01■■■□□ 2.23
SHF-208ENST00000560734 TMTC3Q6ZXV5 915 aa29.01■■■□□ 2.23
SHF-208ENST00000560734 NOSTRINQ8IVI9 506 aa29.01■■■□□ 2.23
SHF-208ENST00000560734 CAMKK2Q96RR4 588 aa29.01■■■□□ 2.23
SHF-208ENST00000560734 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.01■■■□□ 2.23
SHF-208ENST00000560734 TEX11Q8IYF3 940 aa29■■■□□ 2.23
SHF-208ENST00000560734 RNF214Q8ND24 703 aa29■■■□□ 2.23
SHF-208ENST00000560734 CTCFLQ8NI51 663 aaPredicted RBP29■■■□□ 2.23
SHF-208ENST00000560734 CDK5RAP2Q96SN8 1893 aa29■■■□□ 2.23
SHF-208ENST00000560734 H0YIN7 160 aa29■■■□□ 2.23
SHF-208ENST00000560734 GTF2IP78347 998 aa29■■■□□ 2.23
SHF-208ENST00000560734 RCSD1Q6JBY9 416 aa29■■■□□ 2.23
SHF-208ENST00000560734 CCDC125Q86Z20 511 aa29■■■□□ 2.23
SHF-208ENST00000560734 MORC2Q9Y6X9 1032 aaPredicted RBP29■■■□□ 2.23
SHF-208ENST00000560734 KIF5BP33176 963 aa28.99■■■□□ 2.23
SHF-208ENST00000560734 GUCY1A2P33402 732 aa28.99■■■□□ 2.23
SHF-208ENST00000560734 TFAP4Q01664 338 aa28.99■■■□□ 2.23
SHF-208ENST00000560734 FSIP1Q8NA03 581 aa28.99■■■□□ 2.23
SHF-208ENST00000560734 MKNK2Q9HBH9 465 aa28.99■■■□□ 2.23
SHF-208ENST00000560734 STK32BQ9NY57 414 aa28.99■■■□□ 2.23
SHF-208ENST00000560734 KINO60870 393 aaKnown RBP28.98■■■□□ 2.23
SHF-208ENST00000560734 CMA1P23946 247 aa28.98■■■□□ 2.23
SHF-208ENST00000560734 FKBP1AP62942 108 aaKnown RBP28.98■■■□□ 2.23
SHF-208ENST00000560734 TYRO3Q06418 890 aa28.98■■■□□ 2.23
SHF-208ENST00000560734 FAM47AQ5JRC9 791 aa28.98■■■□□ 2.23
SHF-208ENST00000560734 PODNQ7Z5L7 613 aa28.98■■■□□ 2.23
SHF-208ENST00000560734 C2CD5Q86YS7 1000 aa28.98■■■□□ 2.23
SHF-208ENST00000560734 FOCADQ5VW36 1801 aa28.97■■■□□ 2.23
SHF-208ENST00000560734 EVX2Q03828 476 aa28.97■■■□□ 2.23
SHF-208ENST00000560734 RILPL1Q5EBL4 403 aa28.97■■■□□ 2.23
SHF-208ENST00000560734 C16orf86Q6ZW13 317 aa28.97■■■□□ 2.23
SHF-208ENST00000560734 ZNF444Q8N0Y2 327 aaPredicted RBP28.97■■■□□ 2.23
SHF-208ENST00000560734 GOLPH3LQ9H4A5 285 aa28.97■■■□□ 2.23
SHF-208ENST00000560734 FLT1P17948 1338 aa28.97■■■□□ 2.23
SHF-208ENST00000560734 PTPAQ15257 358 aa28.97■■■□□ 2.23
SHF-208ENST00000560734 CAMK4Q16566 473 aa28.97■■■□□ 2.23
SHF-208ENST00000560734 DIS3L2Q8IYB7 885 aaKnown RBP28.97■■■□□ 2.23
SHF-208ENST00000560734 FMR1NBQ8N0W7 255 aaPredicted RBP28.97■■■□□ 2.23
SHF-208ENST00000560734 MRIQ9BWK5 157 aa28.97■■■□□ 2.23
SHF-208ENST00000560734 PKN1Q16512 942 aa28.96■■■□□ 2.23
SHF-208ENST00000560734 AXDND1Q5T1B0 1012 aaPredicted RBP28.96■■■□□ 2.23
SHF-208ENST00000560734 MAPKAPK5Q8IW41 473 aa28.96■■■□□ 2.23
SHF-208ENST00000560734 CNKSR1Q969H4 720 aa28.96■■■□□ 2.23
SHF-208ENST00000560734 KAT14Q9H8E8 782 aa28.96■■■□□ 2.23
SHF-208ENST00000560734 DAGLAQ9Y4D2 1042 aa28.96■■■□□ 2.23
SHF-208ENST00000560734 FAM237AA0A1B0GTK4 181 aa28.95■■■□□ 2.23
SHF-208ENST00000560734 RIMBP2O15034 1052 aa28.95■■■□□ 2.23
SHF-208ENST00000560734 GNAQP50148 359 aa28.95■■■□□ 2.23
SHF-208ENST00000560734 SASS6Q6UVJ0 657 aa28.95■■■□□ 2.23
SHF-208ENST00000560734 HHIPL2Q6UWX4 724 aa28.95■■■□□ 2.23
SHF-208ENST00000560734 FAM200AQ8TCP9 573 aa28.95■■■□□ 2.23
SHF-208ENST00000560734 IL17RBQ9NRM6 502 aa28.95■■■□□ 2.23
SHF-208ENST00000560734 CC2D2BQ6DHV5 1058 aa28.94■■■□□ 2.22
SHF-208ENST00000560734 MRVI1Q9Y6F6 885 aa28.94■■■□□ 2.22
SHF-208ENST00000560734 RASA1P20936 1047 aa28.94■■■□□ 2.22
SHF-208ENST00000560734 FAM177A1Q8N128 213 aaPredicted RBP28.94■■■□□ 2.22
SHF-208ENST00000560734 DYNLL2Q96FJ2 89 aa28.94■■■□□ 2.22
SHF-208ENST00000560734 PHF20Q9BVI0 1012 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms