RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 FLNBO75369 2602 aaKnown RBP8.48□□□□□ -1.05
HERC1-208ENST00000560462 COL4A6Q14031 1691 aa8.47□□□□□ -1.05
HERC1-208ENST00000560462 FAM186AA6NE01 2351 aa8.47□□□□□ -1.05
HERC1-208ENST00000560462 USP24Q9UPU5 2620 aa8.47□□□□□ -1.05
HERC1-208ENST00000560462 FAM208BQ5VWN6 2430 aa8.47□□□□□ -1.05
HERC1-208ENST00000560462 CLTBP09497 229 aa8.47□□□□□ -1.05
HERC1-208ENST00000560462 TLE2Q04725 743 aa8.47□□□□□ -1.05
HERC1-208ENST00000560462 RASIP1Q5U651 963 aa8.47□□□□□ -1.05
HERC1-208ENST00000560462 CCDC174Q6PII3 467 aa8.47□□□□□ -1.05
HERC1-208ENST00000560462 MORC1Q86VD1 984 aa8.47□□□□□ -1.05
HERC1-208ENST00000560462 TXNRD3Q86VQ6 643 aa8.47□□□□□ -1.05
HERC1-208ENST00000560462 LPAR1Q92633 364 aa8.47□□□□□ -1.05
HERC1-208ENST00000560462 CACNA1HO95180 2353 aa8.47□□□□□ -1.05
HERC1-208ENST00000560462 GVINP1Q7Z2Y8 2422 aa8.46□□□□□ -1.05
HERC1-208ENST00000560462 DOCK3Q8IZD9 2030 aa8.46□□□□□ -1.05
HERC1-208ENST00000560462 KIAA0355O15063 1070 aa8.46□□□□□ -1.06
HERC1-208ENST00000560462 MSCO60682 206 aa8.46□□□□□ -1.06
HERC1-208ENST00000560462 HOXB3P14651 431 aaPredicted RBP8.46□□□□□ -1.06
HERC1-208ENST00000560462 INPP5BP32019 993 aa8.46□□□□□ -1.06
HERC1-208ENST00000560462 RTL5Q5HYW3 569 aaPredicted RBP8.46□□□□□ -1.06
HERC1-208ENST00000560462 DCAF15Q66K64 600 aa8.46□□□□□ -1.06
HERC1-208ENST00000560462 GADL1Q6ZQY3 521 aa8.46□□□□□ -1.06
HERC1-208ENST00000560462 SUGP1Q8IWZ8 645 aaKnown RBP8.46□□□□□ -1.06
HERC1-208ENST00000560462 PTCD2Q8WV60 388 aaKnown RBP8.46□□□□□ -1.06
HERC1-208ENST00000560462 RMDN1Q96DB5 314 aa8.46□□□□□ -1.06
HERC1-208ENST00000560462 THUMPD2Q9BTF0 503 aaKnown RBP8.46□□□□□ -1.06
HERC1-208ENST00000560462 YBX2Q9Y2T7 364 aaKnown RBP8.46□□□□□ -1.06
HERC1-208ENST00000560462 DAGLAQ9Y4D2 1042 aa8.46□□□□□ -1.06
HERC1-208ENST00000560462 GAKO14976 1311 aa8.46□□□□□ -1.06
HERC1-208ENST00000560462 PRRC2BQ5JSZ5 2229 aaKnown RBP8.46□□□□□ -1.06
HERC1-208ENST00000560462 ARAP2Q8WZ64 1704 aa8.46□□□□□ -1.06
HERC1-208ENST00000560462 VPS13AQ96RL7 3174 aa8.45□□□□□ -1.06
HERC1-208ENST00000560462 A0A0G2JLL6 359 aaPredicted RBP8.45□□□□□ -1.06
HERC1-208ENST00000560462 KBTBD13C9JR72 458 aa8.45□□□□□ -1.06
HERC1-208ENST00000560462 IRS4O14654 1257 aaPredicted RBP8.45□□□□□ -1.06
HERC1-208ENST00000560462 CCT4P50991 539 aaKnown RBP8.45□□□□□ -1.06
HERC1-208ENST00000560462 GJC2Q5T442 439 aaPredicted RBP8.45□□□□□ -1.06
HERC1-208ENST00000560462 C1orf53Q5VUE5 145 aa8.45□□□□□ -1.06
HERC1-208ENST00000560462 KRT40Q6A162 431 aa8.45□□□□□ -1.06
HERC1-208ENST00000560462 MCM10Q7L590 875 aa8.45□□□□□ -1.06
HERC1-208ENST00000560462 COPS6Q7L5N1 327 aa8.45□□□□□ -1.06
HERC1-208ENST00000560462 LRP10Q7Z4F1 713 aa8.45□□□□□ -1.06
HERC1-208ENST00000560462 PRRT2Q7Z6L0 340 aaPredicted RBP8.45□□□□□ -1.06
HERC1-208ENST00000560462 ANKRD18AQ8IVF6 992 aa8.45□□□□□ -1.06
HERC1-208ENST00000560462 SOCS4Q8WXH5 440 aa8.45□□□□□ -1.06
HERC1-208ENST00000560462 RTF1Q92541 710 aaKnown RBP8.45□□□□□ -1.06
HERC1-208ENST00000560462 EPAS1Q99814 870 aa8.45□□□□□ -1.06
HERC1-208ENST00000560462 NUDT12Q9BQG2 462 aa8.45□□□□□ -1.06
HERC1-208ENST00000560462 ZNF341Q9BYN7 854 aa8.45□□□□□ -1.06
HERC1-208ENST00000560462 NPDC1Q9NQX5 325 aaPredicted RBP8.45□□□□□ -1.06
HERC1-208ENST00000560462 DDX20Q9UHI6 824 aaKnown RBP8.45□□□□□ -1.06
HERC1-208ENST00000560462 SERPINA10Q9UK55 444 aa8.45□□□□□ -1.06
HERC1-208ENST00000560462 MAP1BP46821 2468 aaKnown RBP8.45□□□□□ -1.06
HERC1-208ENST00000560462 RFXAPO00287 272 aa8.44□□□□□ -1.06
HERC1-208ENST00000560462 GALR2O43603 387 aaPredicted RBP8.44□□□□□ -1.06
HERC1-208ENST00000560462 RAD21O60216 631 aa8.44□□□□□ -1.06
HERC1-208ENST00000560462 EPHA10Q5JZY3 1008 aa8.44□□□□□ -1.06
HERC1-208ENST00000560462 TMEM240Q5SV17 173 aa8.44□□□□□ -1.06
HERC1-208ENST00000560462 BMP8AQ7Z5Y6 402 aa8.44□□□□□ -1.06
HERC1-208ENST00000560462 ADSSL1Q8N142 457 aa8.44□□□□□ -1.06
HERC1-208ENST00000560462 ARRDC4Q8NCT1 418 aa8.44□□□□□ -1.06
HERC1-208ENST00000560462 PBXIP1Q96AQ6 731 aa8.44□□□□□ -1.06
HERC1-208ENST00000560462 FSD1Q9BTV5 496 aa8.44□□□□□ -1.06
HERC1-208ENST00000560462 SH2B1Q9NRF2 756 aaPredicted RBP8.44□□□□□ -1.06
HERC1-208ENST00000560462 TMEM39AQ9NV64 488 aa8.44□□□□□ -1.06
HERC1-208ENST00000560462 MIS18AQ9NYP9 233 aa8.44□□□□□ -1.06
HERC1-208ENST00000560462 ASH1LQ9NR48 2969 aaKnown RBP8.44□□□□□ -1.06
HERC1-208ENST00000560462 FRMPD3Q5JV73 1810 aa8.43□□□□□ -1.06
HERC1-208ENST00000560462 RLFQ13129 1914 aa8.43□□□□□ -1.06
HERC1-208ENST00000560462 DIAPH1O60610 1272 aaKnown RBP8.43□□□□□ -1.06
HERC1-208ENST00000560462 SLC5A1P13866 664 aa8.43□□□□□ -1.06
HERC1-208ENST00000560462 IL9P15248 144 aa8.43□□□□□ -1.06
HERC1-208ENST00000560462 CNGA1P29973 690 aa8.43□□□□□ -1.06
HERC1-208ENST00000560462 PPIGQ13427 754 aaKnown RBP eCLIP8.43□□□□□ -1.06
HERC1-208ENST00000560462 TAF7Q15545 349 aaPredicted RBP8.43□□□□□ -1.06
HERC1-208ENST00000560462 CCL14Q16627 93 aa8.43□□□□□ -1.06
HERC1-208ENST00000560462 LEXMQ3ZCV2 418 aa8.43□□□□□ -1.06
HERC1-208ENST00000560462 CCDC152Q4G0S7 254 aa8.43□□□□□ -1.06
HERC1-208ENST00000560462 C16orf59Q7L2K0 433 aa8.43□□□□□ -1.06
HERC1-208ENST00000560462 UPF3BQ9BZI7 483 aaKnown RBP8.43□□□□□ -1.06
HERC1-208ENST00000560462 ALG13Q9NP73 1137 aaKnown RBP8.43□□□□□ -1.06
HERC1-208ENST00000560462 PNMA3Q9UL41 463 aa8.43□□□□□ -1.06
HERC1-208ENST00000560462 MINPP1Q9UNW1 487 aa8.43□□□□□ -1.06
HERC1-208ENST00000560462 ZNF521Q96K83 1311 aa8.43□□□□□ -1.06
HERC1-208ENST00000560462 PLXNA3P51805 1871 aa8.43□□□□□ -1.06
HERC1-208ENST00000560462 DMDP11532 3685 aa8.42□□□□□ -1.06
HERC1-208ENST00000560462 H0Y858 1186 aa8.42□□□□□ -1.06
HERC1-208ENST00000560462 KLRK1P26718 216 aa8.42□□□□□ -1.06
HERC1-208ENST00000560462 ADCYAP1R1P41586 468 aa8.42□□□□□ -1.06
HERC1-208ENST00000560462 GCLCP48506 637 aaPredicted RBP8.42□□□□□ -1.06
HERC1-208ENST00000560462 FKBP1AP62942 108 aaKnown RBP8.42□□□□□ -1.06
HERC1-208ENST00000560462 AIMP1Q12904 312 aaKnown RBP8.42□□□□□ -1.06
HERC1-208ENST00000560462 PUM1Q14671 1186 aaKnown RBP eCLIP8.42□□□□□ -1.06
HERC1-208ENST00000560462 PROSER3Q2NL68 480 aa8.42□□□□□ -1.06
HERC1-208ENST00000560462 ASTLQ6HA08 431 aaPredicted RBP8.42□□□□□ -1.06
HERC1-208ENST00000560462 PTCRAQ6ISU1 281 aaPredicted RBP8.42□□□□□ -1.06
HERC1-208ENST00000560462 PSRC1Q6PGN9 363 aaPredicted RBP8.42□□□□□ -1.06
HERC1-208ENST00000560462 TMEM92Q6UXU6 159 aa8.42□□□□□ -1.06
HERC1-208ENST00000560462 MIGA2Q7L4E1 593 aa8.42□□□□□ -1.06
HERC1-208ENST00000560462 DZIP1LQ8IYY4 767 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms