RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 TNPO2O14787 897 aaKnown RBP17.04■□□□□ 0.32
TPM1-223ENST00000560445 PDE6AP16499 860 aa17.04■□□□□ 0.32
TPM1-223ENST00000560445 CABP5Q9NP86 173 aa17.04■□□□□ 0.32
TPM1-223ENST00000560445 BIN2Q9UBW5 565 aaPredicted RBP17.04■□□□□ 0.32
TPM1-223ENST00000560445 SAP30BPQ9UHR5 308 aaKnown RBP17.04■□□□□ 0.32
TPM1-223ENST00000560445 MGAMO43451 1857 aa17.03■□□□□ 0.32
TPM1-223ENST00000560445 ATP5JP18859 108 aa17.03■□□□□ 0.32
TPM1-223ENST00000560445 DYNLL1P63167 89 aaKnown RBP17.03■□□□□ 0.32
TPM1-223ENST00000560445 GCC1Q96CN9 775 aa17.03■□□□□ 0.32
TPM1-223ENST00000560445 FEZ1Q99689 392 aa17.03■□□□□ 0.32
TPM1-223ENST00000560445 PAG1Q9NWQ8 432 aa17.03■□□□□ 0.32
TPM1-223ENST00000560445 POLR3DP05423 398 aaPredicted RBP17.02■□□□□ 0.32
TPM1-223ENST00000560445 USP14P54578 494 aa17.02■□□□□ 0.32
TPM1-223ENST00000560445 IRF5Q13568 498 aa17.02■□□□□ 0.32
TPM1-223ENST00000560445 MTMR2Q13614 643 aa17.02■□□□□ 0.32
TPM1-223ENST00000560445 SIRT2Q8IXJ6 389 aa17.02■□□□□ 0.32
TPM1-223ENST00000560445 PXYLP1Q8TE99 480 aa17.02■□□□□ 0.32
TPM1-223ENST00000560445 SH3TC2Q8TF17 1288 aa17.02■□□□□ 0.32
TPM1-223ENST00000560445 ANTXR1Q9H6X2 564 aa17.02■□□□□ 0.32
TPM1-223ENST00000560445 SIPA1L1O43166 1804 aa17.02■□□□□ 0.31
TPM1-223ENST00000560445 NAV1Q8NEY1 1877 aa17.01■□□□□ 0.31
TPM1-223ENST00000560445 POTEFA5A3E0 1075 aa17.01■□□□□ 0.31
TPM1-223ENST00000560445 HOXA7P31268 230 aaPredicted RBP17.01■□□□□ 0.31
TPM1-223ENST00000560445 PRKCZQ05513 592 aa17.01■□□□□ 0.31
TPM1-223ENST00000560445 LRRFIP1Q32MZ4 808 aaKnown RBP17.01■□□□□ 0.31
TPM1-223ENST00000560445 TREML2Q5T2D2 321 aa17.01■□□□□ 0.31
TPM1-223ENST00000560445 USP17L2Q6R6M4 530 aa17.01■□□□□ 0.31
TPM1-223ENST00000560445 ANKRD13CQ8N6S4 541 aa17.01■□□□□ 0.31
TPM1-223ENST00000560445 RIOK1Q9BRS2 568 aaKnown RBP17.01■□□□□ 0.31
TPM1-223ENST00000560445 ASCC2Q9H1I8 757 aaPredicted RBP17.01■□□□□ 0.31
TPM1-223ENST00000560445 TNRC18O15417 2968 aaPredicted RBP17.01■□□□□ 0.31
TPM1-223ENST00000560445 ZNF532Q9HCE3 1301 aa17■□□□□ 0.31
TPM1-223ENST00000560445 CAP1Q01518 475 aa17■□□□□ 0.31
TPM1-223ENST00000560445 ABCB5Q2M3G0 1257 aa17■□□□□ 0.31
TPM1-223ENST00000560445 CERKLQ49MI3 558 aaPredicted RBP17■□□□□ 0.31
TPM1-223ENST00000560445 TATDN1Q6P1N9 297 aa17■□□□□ 0.31
TPM1-223ENST00000560445 CCDC84Q86UT8 332 aaPredicted RBP17■□□□□ 0.31
TPM1-223ENST00000560445 CCAR1Q8IX12 1150 aaKnown RBP17■□□□□ 0.31
TPM1-223ENST00000560445 HAUS7Q99871 368 aa17■□□□□ 0.31
TPM1-223ENST00000560445 BCL11AQ9H165 835 aa17■□□□□ 0.31
TPM1-223ENST00000560445 DNAJC18Q9H819 358 aa17■□□□□ 0.31
TPM1-223ENST00000560445 FRMD4AQ9P2Q2 1039 aaPredicted RBP17■□□□□ 0.31
TPM1-223ENST00000560445 NDUFB9Q9Y6M9 179 aa17■□□□□ 0.31
TPM1-223ENST00000560445 ZSWIM8A7E2V4 1837 aa16.99■□□□□ 0.31
TPM1-223ENST00000560445 GDF11O95390 407 aa16.99■□□□□ 0.31
TPM1-223ENST00000560445 GH2P01242 217 aa16.99■□□□□ 0.31
TPM1-223ENST00000560445 SLURP2P0DP57 97 aa16.99■□□□□ 0.31
TPM1-223ENST00000560445 ATP8A2Q9NTI2 1148 aa16.99■□□□□ 0.31
TPM1-223ENST00000560445 MCM9Q9NXL9 1143 aa16.99■□□□□ 0.31
TPM1-223ENST00000560445 MORF4L1Q9UBU8 362 aa16.99■□□□□ 0.31
TPM1-223ENST00000560445 SWAP70Q9UH65 585 aa16.99■□□□□ 0.31
TPM1-223ENST00000560445 ADCY3O60266 1144 aa16.98■□□□□ 0.31
TPM1-223ENST00000560445 ECM2O94769 699 aaPredicted RBP16.98■□□□□ 0.31
TPM1-223ENST00000560445 GJB1P08034 283 aa16.98■□□□□ 0.31
TPM1-223ENST00000560445 FLT3LGP49771 235 aa16.98■□□□□ 0.31
TPM1-223ENST00000560445 RRP1BQ14684 758 aaKnown RBP16.98■□□□□ 0.31
TPM1-223ENST00000560445 UBE3CQ15386 1083 aa16.98■□□□□ 0.31
TPM1-223ENST00000560445 SOCS4Q8WXH5 440 aa16.98■□□□□ 0.31
TPM1-223ENST00000560445 C12orf42Q96LP6 360 aa16.98■□□□□ 0.31
TPM1-223ENST00000560445 BOLA2Q9H3K6 86 aa16.98■□□□□ 0.31
TPM1-223ENST00000560445 SH2D4AQ9H788 454 aa16.98■□□□□ 0.31
TPM1-223ENST00000560445 ECHDC1Q9NTX5 307 aa16.98■□□□□ 0.31
TPM1-223ENST00000560445 ZBTB47Q9UFB7 747 aaPredicted RBP16.98■□□□□ 0.31
TPM1-223ENST00000560445 DDX60LQ5H9U9 1706 aaKnown RBP16.98■□□□□ 0.31
TPM1-223ENST00000560445 MYH7P12883 1935 aa16.98■□□□□ 0.31
TPM1-223ENST00000560445 EN2P19622 333 aaPredicted RBP16.97■□□□□ 0.31
TPM1-223ENST00000560445 CTGFP29279 349 aa16.97■□□□□ 0.31
TPM1-223ENST00000560445 ADD2P35612 726 aa16.97■□□□□ 0.31
TPM1-223ENST00000560445 CCNA1P78396 465 aa16.97■□□□□ 0.31
TPM1-223ENST00000560445 RAB3GAP1Q15042 981 aa16.97■□□□□ 0.31
TPM1-223ENST00000560445 TRMT44Q8IYL2 757 aaKnown RBP16.97■□□□□ 0.31
TPM1-223ENST00000560445 GPRC5AQ8NFJ5 357 aa16.97■□□□□ 0.31
TPM1-223ENST00000560445 KIAA1683Q9H0B3 1180 aa16.97■□□□□ 0.31
TPM1-223ENST00000560445 RNF208Q9H0X6 261 aa16.97■□□□□ 0.31
TPM1-223ENST00000560445 TCRBV5S4A2TA0A5A2 114 aa16.96■□□□□ 0.31
TPM1-223ENST00000560445 USP17L15C9J2P7 530 aa16.96■□□□□ 0.31
TPM1-223ENST00000560445 USP17L13C9JLJ4 530 aa16.96■□□□□ 0.31
TPM1-223ENST00000560445 USP17L11C9JVI0 530 aa16.96■□□□□ 0.31
TPM1-223ENST00000560445 USP17L18D6R9N7 530 aa16.96■□□□□ 0.31
TPM1-223ENST00000560445 USP17L22D6RA61 530 aa16.96■□□□□ 0.31
TPM1-223ENST00000560445 USP17L17D6RBQ6 530 aa16.96■□□□□ 0.31
TPM1-223ENST00000560445 USP17L19D6RCP7 530 aa16.96■□□□□ 0.31
TPM1-223ENST00000560445 USP17L20D6RJB6 530 aa16.96■□□□□ 0.31
TPM1-223ENST00000560445 GLRX3O76003 335 aaKnown RBP16.96■□□□□ 0.31
TPM1-223ENST00000560445 CCL5P13501 91 aa16.96■□□□□ 0.31
TPM1-223ENST00000560445 MAPK4P31152 587 aa16.96■□□□□ 0.31
TPM1-223ENST00000560445 HERVK_113P62684 666 aa16.96■□□□□ 0.31
TPM1-223ENST00000560445 USP17L24Q0WX57 530 aa16.96■□□□□ 0.31
TPM1-223ENST00000560445 C20orf194Q5TEA3 1177 aa16.96■□□□□ 0.31
TPM1-223ENST00000560445 DCTPP1Q9H773 170 aa16.96■□□□□ 0.31
TPM1-223ENST00000560445 CWC22Q9HCG8 908 aaKnown RBP16.96■□□□□ 0.31
TPM1-223ENST00000560445 ERC2O15083 957 aa16.95■□□□□ 0.3
TPM1-223ENST00000560445 MBD4O95243 580 aa16.95■□□□□ 0.3
TPM1-223ENST00000560445 MYCP01106 439 aaPredicted RBP16.95■□□□□ 0.3
TPM1-223ENST00000560445 ZFYP08048 801 aaPredicted RBP16.95■□□□□ 0.3
TPM1-223ENST00000560445 GJA8P48165 433 aa16.95■□□□□ 0.3
TPM1-223ENST00000560445 MAPK8IP2Q13387 824 aaPredicted RBP16.95■□□□□ 0.3
TPM1-223ENST00000560445 TMEM179Q6ZVK1 233 aa16.95■□□□□ 0.3
TPM1-223ENST00000560445 CCDC17Q96LX7 622 aa16.95■□□□□ 0.3
TPM1-223ENST00000560445 HTATIP2Q9BUP3 242 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms