RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 SH3D19Q5HYK7 790 aa12.91□□□□□ -0.34
APH1B-208ENST00000560353 AKNAD1Q5T1N1 836 aa12.91□□□□□ -0.34
APH1B-208ENST00000560353 MFSD14CQ5VZR4 134 aa12.91□□□□□ -0.34
APH1B-208ENST00000560353 P2RX7Q99572 595 aaKnown RBP12.91□□□□□ -0.34
APH1B-208ENST00000560353 DDX20Q9UHI6 824 aaKnown RBP12.91□□□□□ -0.34
APH1B-208ENST00000560353 MAST2Q6P0Q8 1798 aa12.91□□□□□ -0.34
APH1B-208ENST00000560353 PLXNB2O15031 1838 aa12.9□□□□□ -0.34
APH1B-208ENST00000560353 F6X3S4 739 aa12.9□□□□□ -0.34
APH1B-208ENST00000560353 PRDX5P30044 214 aa12.9□□□□□ -0.34
APH1B-208ENST00000560353 HOXA7P31268 230 aaPredicted RBP12.9□□□□□ -0.34
APH1B-208ENST00000560353 SLC39A5Q6ZMH5 540 aa12.9□□□□□ -0.34
APH1B-208ENST00000560353 PLEKHH3Q7Z736 793 aa12.9□□□□□ -0.34
APH1B-208ENST00000560353 ARRDC4Q8NCT1 418 aa12.9□□□□□ -0.34
APH1B-208ENST00000560353 PPM1EQ8WY54 764 aa12.9□□□□□ -0.34
APH1B-208ENST00000560353 OSBPL5Q9H0X9 879 aaPredicted RBP12.9□□□□□ -0.34
APH1B-208ENST00000560353 ZNF576Q9H609 170 aa12.9□□□□□ -0.34
APH1B-208ENST00000560353 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.89□□□□□ -0.35
APH1B-208ENST00000560353 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.89□□□□□ -0.35
APH1B-208ENST00000560353 USP17L5A8MUK1 530 aa12.89□□□□□ -0.35
APH1B-208ENST00000560353 GLRX3O76003 335 aaKnown RBP12.89□□□□□ -0.35
APH1B-208ENST00000560353 SLURP2P0DP57 97 aa12.89□□□□□ -0.35
APH1B-208ENST00000560353 DNAJB2P25686 324 aa12.89□□□□□ -0.35
APH1B-208ENST00000560353 CNGA1P29973 690 aa12.89□□□□□ -0.35
APH1B-208ENST00000560353 HERVK_113P62684 666 aa12.89□□□□□ -0.35
APH1B-208ENST00000560353 GPR142Q7Z601 462 aa12.89□□□□□ -0.35
APH1B-208ENST00000560353 SLC39A7Q92504 469 aa12.89□□□□□ -0.35
APH1B-208ENST00000560353 EDC3Q96F86 508 aaKnown RBP12.89□□□□□ -0.35
APH1B-208ENST00000560353 GAS2L1Q99501 681 aaPredicted RBP12.89□□□□□ -0.35
APH1B-208ENST00000560353 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.89□□□□□ -0.35
APH1B-208ENST00000560353 AS3MTQ9HBK9 375 aa12.89□□□□□ -0.35
APH1B-208ENST00000560353 CWC22Q9HCG8 908 aaKnown RBP12.89□□□□□ -0.35
APH1B-208ENST00000560353 TXNRD2Q9NNW7 524 aa12.89□□□□□ -0.35
APH1B-208ENST00000560353 RBPJLQ9UBG7 517 aa12.89□□□□□ -0.35
APH1B-208ENST00000560353 LTBP2Q14767 1821 aa12.89□□□□□ -0.35
APH1B-208ENST00000560353 PHIPQ8WWQ0 1821 aa12.89□□□□□ -0.35
APH1B-208ENST00000560353 DOCK1Q14185 1865 aa12.89□□□□□ -0.35
APH1B-208ENST00000560353 UTYO14607 1347 aa12.88□□□□□ -0.35
APH1B-208ENST00000560353 ATMINO43313 823 aaPredicted RBP12.88□□□□□ -0.35
APH1B-208ENST00000560353 ALDH1L1O75891 902 aa12.88□□□□□ -0.35
APH1B-208ENST00000560353 FGFR2P21802 821 aa12.88□□□□□ -0.35
APH1B-208ENST00000560353 MAP2K5Q13163 448 aa12.88□□□□□ -0.35
APH1B-208ENST00000560353 GTF3C2Q8WUA4 911 aaPredicted RBP12.88□□□□□ -0.35
APH1B-208ENST00000560353 PDLIM7Q9NR12 457 aa12.88□□□□□ -0.35
APH1B-208ENST00000560353 GNL3LQ9NVN8 582 aaKnown RBP12.88□□□□□ -0.35
APH1B-208ENST00000560353 TMOD4Q9NZQ9 345 aa12.88□□□□□ -0.35
APH1B-208ENST00000560353 CHD9Q3L8U1 2897 aa12.88□□□□□ -0.35
APH1B-208ENST00000560353 DOCK2Q92608 1830 aa12.88□□□□□ -0.35
APH1B-208ENST00000560353 SALL1Q9NSC2 1324 aa12.88□□□□□ -0.35
APH1B-208ENST00000560353 RFX7Q2KHR2 1363 aa12.87□□□□□ -0.35
APH1B-208ENST00000560353 TRIM43BA6NCK2 446 aa12.87□□□□□ -0.35
APH1B-208ENST00000560353 KBTBD13C9JR72 458 aa12.87□□□□□ -0.35
APH1B-208ENST00000560353 PEX10O60683 326 aa12.87□□□□□ -0.35
APH1B-208ENST00000560353 SLC5A1P13866 664 aa12.87□□□□□ -0.35
APH1B-208ENST00000560353 CAP2P40123 477 aa12.87□□□□□ -0.35
APH1B-208ENST00000560353 ERVK-9P63128 1117 aa12.87□□□□□ -0.35
APH1B-208ENST00000560353 ERVK-24P63145 666 aa12.87□□□□□ -0.35
APH1B-208ENST00000560353 PICALMQ13492 652 aa12.87□□□□□ -0.35
APH1B-208ENST00000560353 SNX17Q15036 470 aa12.87□□□□□ -0.35
APH1B-208ENST00000560353 TRIM60Q495X7 471 aa12.87□□□□□ -0.35
APH1B-208ENST00000560353 SLF2Q8IX21 1173 aa12.87□□□□□ -0.35
APH1B-208ENST00000560353 LPIN2Q92539 896 aa12.87□□□□□ -0.35
APH1B-208ENST00000560353 TRIM43Q96BQ3 446 aaPredicted RBP12.87□□□□□ -0.35
APH1B-208ENST00000560353 TIFAQ96CG3 184 aa12.87□□□□□ -0.35
APH1B-208ENST00000560353 KAZALD1Q96I82 304 aa12.87□□□□□ -0.35
APH1B-208ENST00000560353 SUCLG2Q96I99 432 aa12.87□□□□□ -0.35
APH1B-208ENST00000560353 WDR18Q9BV38 432 aa12.87□□□□□ -0.35
APH1B-208ENST00000560353 PORCNQ9H237 461 aa12.87□□□□□ -0.35
APH1B-208ENST00000560353 GAKO14976 1311 aa12.87□□□□□ -0.35
APH1B-208ENST00000560353 LOC285556D6RIA3 1793 aa12.86□□□□□ -0.35
APH1B-208ENST00000560353 C7P10643 843 aa12.86□□□□□ -0.35
APH1B-208ENST00000560353 BACE1P56817 501 aa12.86□□□□□ -0.35
APH1B-208ENST00000560353 ATP2B2Q01814 1243 aa12.86□□□□□ -0.35
APH1B-208ENST00000560353 Q3C1V9 767 aa12.86□□□□□ -0.35
APH1B-208ENST00000560353 RABL6Q3YEC7 729 aaPredicted RBP12.86□□□□□ -0.35
APH1B-208ENST00000560353 GJC2Q5T442 439 aaPredicted RBP12.86□□□□□ -0.35
APH1B-208ENST00000560353 C1orf53Q5VUE5 145 aa12.86□□□□□ -0.35
APH1B-208ENST00000560353 POTEEQ6S8J3 1075 aa12.86□□□□□ -0.35
APH1B-208ENST00000560353 SH3RF1Q7Z6J0 888 aa12.86□□□□□ -0.35
APH1B-208ENST00000560353 DDX4Q9NQI0 724 aaKnown RBP12.86□□□□□ -0.35
APH1B-208ENST00000560353 TACC3Q9Y6A5 838 aa12.86□□□□□ -0.35
APH1B-208ENST00000560353 FAM196BA6NMK8 535 aa12.85□□□□□ -0.35
APH1B-208ENST00000560353 EPHB4P54760 987 aa12.85□□□□□ -0.35
APH1B-208ENST00000560353 MTMR2Q13614 643 aa12.85□□□□□ -0.35
APH1B-208ENST00000560353 ZGPATQ8N5A5 531 aaKnown RBP12.85□□□□□ -0.35
APH1B-208ENST00000560353 FAM163AQ96GL9 167 aaPredicted RBP12.85□□□□□ -0.35
APH1B-208ENST00000560353 LRFN3Q9BTN0 628 aa12.85□□□□□ -0.35
APH1B-208ENST00000560353 SRCIN1Q9C0H9 1055 aa12.85□□□□□ -0.35
APH1B-208ENST00000560353 BICC1Q9H694 974 aaKnown RBP12.85□□□□□ -0.35
APH1B-208ENST00000560353 BMP2KQ9NSY1 1161 aaPredicted RBP12.85□□□□□ -0.35
APH1B-208ENST00000560353 FLRT1Q9NZU1 646 aa12.85□□□□□ -0.35
APH1B-208ENST00000560353 DENND2AQ9ULE3 1009 aa12.85□□□□□ -0.35
APH1B-208ENST00000560353 SLC15A5A6NIM6 579 aa12.84□□□□□ -0.35
APH1B-208ENST00000560353 C19orf81C9J6K1 198 aa12.84□□□□□ -0.35
APH1B-208ENST00000560353 SEMA3EO15041 775 aa12.84□□□□□ -0.35
APH1B-208ENST00000560353 HOXC6P09630 235 aa12.84□□□□□ -0.35
APH1B-208ENST00000560353 NBPF7P0C2Y1 421 aaPredicted RBP12.84□□□□□ -0.35
APH1B-208ENST00000560353 CCNA1P78396 465 aa12.84□□□□□ -0.35
APH1B-208ENST00000560353 TLE2Q04725 743 aa12.84□□□□□ -0.35
APH1B-208ENST00000560353 FPGSQ05932 587 aa12.84□□□□□ -0.35
APH1B-208ENST00000560353 DZIP1Q86YF9 867 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms