RNA–Protein interactions for RNA: ENST00000560220.5

KNSTRN-209, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 5

Gene KNSTRN, Length 903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-209ENST00000560220 ATOH1Q92858 354 aaPredicted RBP12.76□□□□□ -0.37
KNSTRN-209ENST00000560220 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.76□□□□□ -0.37
KNSTRN-209ENST00000560220 C22orf23Q9BZE7 217 aa12.76□□□□□ -0.37
KNSTRN-209ENST00000560220 ATRNL1Q5VV63 1379 aa12.76□□□□□ -0.37
KNSTRN-209ENST00000560220 A0A0G2JMZ2 1700 aa12.76□□□□□ -0.37
KNSTRN-209ENST00000560220 SOWAHBA6NEL2 793 aa12.75□□□□□ -0.37
KNSTRN-209ENST00000560220 RLFQ13129 1914 aa12.75□□□□□ -0.37
KNSTRN-209ENST00000560220 ST3GAL2Q16842 350 aa12.75□□□□□ -0.37
KNSTRN-209ENST00000560220 FRMPD3Q5JV73 1810 aa12.75□□□□□ -0.37
KNSTRN-209ENST00000560220 LRP10Q7Z4F1 713 aa12.75□□□□□ -0.37
KNSTRN-209ENST00000560220 LPAR1Q92633 364 aa12.75□□□□□ -0.37
KNSTRN-209ENST00000560220 ZNF341Q9BYN7 854 aa12.75□□□□□ -0.37
KNSTRN-209ENST00000560220 LNPKQ9C0E8 428 aa12.75□□□□□ -0.37
KNSTRN-209ENST00000560220 IRF2BPLQ9H1B7 796 aa12.75□□□□□ -0.37
KNSTRN-209ENST00000560220 TRPC6Q9Y210 931 aa12.75□□□□□ -0.37
KNSTRN-209ENST00000560220 XRCC5P13010 732 aaKnown RBP12.74□□□□□ -0.37
KNSTRN-209ENST00000560220 POU3F3P20264 500 aaPredicted RBP12.74□□□□□ -0.37
KNSTRN-209ENST00000560220 SNX17Q15036 470 aa12.74□□□□□ -0.37
KNSTRN-209ENST00000560220 CCDC152Q4G0S7 254 aa12.74□□□□□ -0.37
KNSTRN-209ENST00000560220 SAMD1Q6SPF0 538 aaPredicted RBP12.74□□□□□ -0.37
KNSTRN-209ENST00000560220 ASCL5Q7RTU5 278 aa12.74□□□□□ -0.37
KNSTRN-209ENST00000560220 DGLUCYQ7Z3D6 616 aa12.74□□□□□ -0.37
KNSTRN-209ENST00000560220 SIRT2Q8IXJ6 389 aa12.74□□□□□ -0.37
KNSTRN-209ENST00000560220 RALYQ9UKM9 306 aaKnown RBP12.74□□□□□ -0.37
KNSTRN-209ENST00000560220 CLTBP09497 229 aa12.73□□□□□ -0.37
KNSTRN-209ENST00000560220 TLE2Q04725 743 aa12.73□□□□□ -0.37
KNSTRN-209ENST00000560220 PROSER3Q2NL68 480 aa12.73□□□□□ -0.37
KNSTRN-209ENST00000560220 GJC2Q5T442 439 aaPredicted RBP12.73□□□□□ -0.37
KNSTRN-209ENST00000560220 NUDT12Q9BQG2 462 aa12.73□□□□□ -0.37
KNSTRN-209ENST00000560220 TBC1D2Q9BYX2 928 aa12.73□□□□□ -0.37
KNSTRN-209ENST00000560220 DCTPP1Q9H773 170 aa12.73□□□□□ -0.37
KNSTRN-209ENST00000560220 CHPF2Q9P2E5 772 aa12.73□□□□□ -0.37
KNSTRN-209ENST00000560220 CFAP47Q6ZTR5 3102 aa12.73□□□□□ -0.37
KNSTRN-209ENST00000560220 PTPRZ1P23471 2315 aaPredicted RBP12.73□□□□□ -0.37
KNSTRN-209ENST00000560220 PLXNB2O15031 1838 aa12.72□□□□□ -0.37
KNSTRN-209ENST00000560220 A0A0G2JLL6 359 aaPredicted RBP12.72□□□□□ -0.37
KNSTRN-209ENST00000560220 KIAA0355O15063 1070 aa12.72□□□□□ -0.37
KNSTRN-209ENST00000560220 ANXA1P04083 346 aa12.72□□□□□ -0.37
KNSTRN-209ENST00000560220 GNAI2P04899 355 aa12.72□□□□□ -0.37
KNSTRN-209ENST00000560220 MFAP1P55081 439 aaKnown RBP12.72□□□□□ -0.37
KNSTRN-209ENST00000560220 PDIA6Q15084 440 aa12.72□□□□□ -0.37
KNSTRN-209ENST00000560220 CCDC174Q6PII3 467 aa12.72□□□□□ -0.37
KNSTRN-209ENST00000560220 MIGA2Q7L4E1 593 aa12.72□□□□□ -0.37
KNSTRN-209ENST00000560220 G2E3Q7L622 706 aa12.72□□□□□ -0.37
KNSTRN-209ENST00000560220 PRRT2Q7Z6L0 340 aaPredicted RBP12.72□□□□□ -0.37
KNSTRN-209ENST00000560220 ANKRD44Q8N8A2 993 aa12.72□□□□□ -0.37
KNSTRN-209ENST00000560220 CCDC85AQ96PX6 553 aaPredicted RBP12.72□□□□□ -0.37
KNSTRN-209ENST00000560220 SRCIN1Q9C0H9 1055 aa12.72□□□□□ -0.37
KNSTRN-209ENST00000560220 C1orf115Q9H7X2 142 aa12.72□□□□□ -0.37
KNSTRN-209ENST00000560220 CD209Q9NNX6 404 aa12.72□□□□□ -0.37
KNSTRN-209ENST00000560220 DDX20Q9UHI6 824 aaKnown RBP12.72□□□□□ -0.37
KNSTRN-209ENST00000560220 MINPP1Q9UNW1 487 aa12.72□□□□□ -0.37
KNSTRN-209ENST00000560220 LEMD3Q9Y2U8 911 aa12.72□□□□□ -0.37
KNSTRN-209ENST00000560220 KBTBD13C9JR72 458 aa12.71□□□□□ -0.37
KNSTRN-209ENST00000560220 MSCO60682 206 aa12.71□□□□□ -0.37
KNSTRN-209ENST00000560220 RBM25P49756 843 aaKnown RBP12.71□□□□□ -0.37
KNSTRN-209ENST00000560220 FKBP1AP62942 108 aaKnown RBP12.71□□□□□ -0.37
KNSTRN-209ENST00000560220 RASIP1Q5U651 963 aa12.71□□□□□ -0.37
KNSTRN-209ENST00000560220 PPP2R2DQ66LE6 453 aa12.71□□□□□ -0.37
KNSTRN-209ENST00000560220 KSR2Q6VAB6 950 aa12.71□□□□□ -0.37
KNSTRN-209ENST00000560220 ARRDC4Q8NCT1 418 aa12.71□□□□□ -0.37
KNSTRN-209ENST00000560220 DNAAF4Q8WXU2 420 aa12.71□□□□□ -0.37
KNSTRN-209ENST00000560220 ANTXR1Q9H6X2 564 aa12.71□□□□□ -0.37
KNSTRN-209ENST00000560220 YBX2Q9Y2T7 364 aaKnown RBP12.71□□□□□ -0.37
KNSTRN-209ENST00000560220 DAGLAQ9Y4D2 1042 aa12.71□□□□□ -0.37
KNSTRN-209ENST00000560220 PROB1E7EW31 1015 aa12.7□□□□□ -0.38
KNSTRN-209ENST00000560220 RFXAPO00287 272 aa12.7□□□□□ -0.38
KNSTRN-209ENST00000560220 ALDH1L1O75891 902 aa12.7□□□□□ -0.38
KNSTRN-209ENST00000560220 UBTFL1P0CB47 393 aaPredicted RBP12.7□□□□□ -0.38
KNSTRN-209ENST00000560220 HSP90B1P14625 803 aaKnown RBP12.7□□□□□ -0.38
KNSTRN-209ENST00000560220 KLRK1P26718 216 aa12.7□□□□□ -0.38
KNSTRN-209ENST00000560220 CNGA1P29973 690 aa12.7□□□□□ -0.38
KNSTRN-209ENST00000560220 NEXNQ0ZGT2 675 aa12.7□□□□□ -0.38
KNSTRN-209ENST00000560220 PKN1Q16512 942 aa12.7□□□□□ -0.38
KNSTRN-209ENST00000560220 C1orf53Q5VUE5 145 aa12.7□□□□□ -0.38
KNSTRN-209ENST00000560220 XAGE3Q8WTP9 111 aa12.7□□□□□ -0.38
KNSTRN-209ENST00000560220 SOCS4Q8WXH5 440 aa12.7□□□□□ -0.38
KNSTRN-209ENST00000560220 PNMA3Q9UL41 463 aa12.7□□□□□ -0.38
KNSTRN-209ENST00000560220 CHD7Q9P2D1 2997 aa12.69□□□□□ -0.38
KNSTRN-209ENST00000560220 GAKO14976 1311 aa12.69□□□□□ -0.38
KNSTRN-209ENST00000560220 F6X3S4 739 aa12.69□□□□□ -0.38
KNSTRN-209ENST00000560220 ATP5J2-PTCD1G3V325 749 aa12.69□□□□□ -0.38
KNSTRN-209ENST00000560220 GSE1Q14687 1217 aa12.69□□□□□ -0.38
KNSTRN-209ENST00000560220 CCL14Q16627 93 aa12.69□□□□□ -0.38
KNSTRN-209ENST00000560220 EPHA10Q5JZY3 1008 aa12.69□□□□□ -0.38
KNSTRN-209ENST00000560220 TMEM240Q5SV17 173 aa12.69□□□□□ -0.38
KNSTRN-209ENST00000560220 PHAXQ9H814 394 aaKnown RBP12.69□□□□□ -0.38
KNSTRN-209ENST00000560220 TMEM39AQ9NV64 488 aa12.69□□□□□ -0.38
KNSTRN-209ENST00000560220 SERPINA10Q9UK55 444 aa12.69□□□□□ -0.38
KNSTRN-209ENST00000560220 COL4A6Q14031 1691 aa12.69□□□□□ -0.38
KNSTRN-209ENST00000560220 CHD6Q8TD26 2715 aa12.68□□□□□ -0.38
KNSTRN-209ENST00000560220 PRRC2BQ5JSZ5 2229 aaKnown RBP12.68□□□□□ -0.38
KNSTRN-209ENST00000560220 PI4KAP2A4QPH2 592 aa12.68□□□□□ -0.38
KNSTRN-209ENST00000560220 PRR23AA6NEV1 266 aa12.68□□□□□ -0.38
KNSTRN-209ENST00000560220 FRAT2O75474 233 aaPredicted RBP12.68□□□□□ -0.38
KNSTRN-209ENST00000560220 GCLCP48506 637 aaPredicted RBP12.68□□□□□ -0.38
KNSTRN-209ENST00000560220 KRT40Q6A162 431 aa12.68□□□□□ -0.38
KNSTRN-209ENST00000560220 PI4KAP1Q8N8J0 262 aa12.68□□□□□ -0.38
KNSTRN-209ENST00000560220 SNX21Q969T3 373 aa12.68□□□□□ -0.38
KNSTRN-209ENST00000560220 ISCA1Q9BUE6 129 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms