RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 MYO5AQ9Y4I1 1855 aaKnown RBP15.91■□□□□ 0.14
RABGGTA-213ENST00000560127 SMCHD1A6NHR9 2005 aa15.9■□□□□ 0.14
RABGGTA-213ENST00000560127 IL15P40933 162 aaPredicted RBP15.9■□□□□ 0.14
RABGGTA-213ENST00000560127 ERVK-9P63128 1117 aa15.9■□□□□ 0.14
RABGGTA-213ENST00000560127 ERVK-24P63145 666 aa15.9■□□□□ 0.14
RABGGTA-213ENST00000560127 JAG1P78504 1218 aa15.9■□□□□ 0.14
RABGGTA-213ENST00000560127 ERICH6Q7L0X2 663 aa15.9■□□□□ 0.14
RABGGTA-213ENST00000560127 GPR142Q7Z601 462 aa15.9■□□□□ 0.14
RABGGTA-213ENST00000560127 APBA2Q99767 749 aa15.9■□□□□ 0.14
RABGGTA-213ENST00000560127 TMOD4Q9NZQ9 345 aa15.9■□□□□ 0.14
RABGGTA-213ENST00000560127 ATN1P54259 1190 aaPredicted RBP15.89■□□□□ 0.13
RABGGTA-213ENST00000560127 TIMM10P62072 90 aa15.89■□□□□ 0.13
RABGGTA-213ENST00000560127 SHHQ15465 462 aa15.89■□□□□ 0.13
RABGGTA-213ENST00000560127 PLEKHH3Q7Z736 793 aa15.89■□□□□ 0.13
RABGGTA-213ENST00000560127 HERC5Q9UII4 1024 aaKnown RBP15.89■□□□□ 0.13
RABGGTA-213ENST00000560127 PA2G4Q9UQ80 394 aaKnown RBP15.89■□□□□ 0.13
RABGGTA-213ENST00000560127 MAP4K4O95819 1239 aaPredicted RBP15.88■□□□□ 0.13
RABGGTA-213ENST00000560127 SHROOM1Q2M3G4 852 aaPredicted RBP15.88■□□□□ 0.13
RABGGTA-213ENST00000560127 C9orf50Q5SZB4 431 aa15.88■□□□□ 0.13
RABGGTA-213ENST00000560127 MYLIPQ8WY64 445 aa15.88■□□□□ 0.13
RABGGTA-213ENST00000560127 TTYH1Q9H313 450 aaPredicted RBP15.88■□□□□ 0.13
RABGGTA-213ENST00000560127 MRS2Q9HD23 443 aa15.88■□□□□ 0.13
RABGGTA-213ENST00000560127 FLRT1Q9NZU1 646 aa15.88■□□□□ 0.13
RABGGTA-213ENST00000560127 C19orf81C9J6K1 198 aa15.87■□□□□ 0.13
RABGGTA-213ENST00000560127 RTP1P59025 263 aa15.87■□□□□ 0.13
RABGGTA-213ENST00000560127 MAP2K5Q13163 448 aa15.87■□□□□ 0.13
RABGGTA-213ENST00000560127 CCAR1Q8IX12 1150 aaKnown RBP15.87■□□□□ 0.13
RABGGTA-213ENST00000560127 NSUN4Q96CB9 384 aaKnown RBP15.87■□□□□ 0.13
RABGGTA-213ENST00000560127 PAGR1Q9BTK6 254 aa15.87■□□□□ 0.13
RABGGTA-213ENST00000560127 MYH1P12882 1939 aa15.87■□□□□ 0.13
RABGGTA-213ENST00000560127 ZNFX1Q9P2E3 1918 aaKnown RBP15.87■□□□□ 0.13
RABGGTA-213ENST00000560127 ASNSP08243 561 aa15.86■□□□□ 0.13
RABGGTA-213ENST00000560127 TBC1D9Q6ZT07 1266 aa15.86■□□□□ 0.13
RABGGTA-213ENST00000560127 SSH1Q8WYL5 1049 aa15.86■□□□□ 0.13
RABGGTA-213ENST00000560127 LPAR1Q92633 364 aa15.86■□□□□ 0.13
RABGGTA-213ENST00000560127 XAGE2Q96GT9 111 aa15.86■□□□□ 0.13
RABGGTA-213ENST00000560127 DNAJC18Q9H819 358 aa15.86■□□□□ 0.13
RABGGTA-213ENST00000560127 COPRSQ9NQ92 184 aa15.86■□□□□ 0.13
RABGGTA-213ENST00000560127 PI4KBQ9UBF8 816 aa15.86■□□□□ 0.13
RABGGTA-213ENST00000560127 PRKAG2Q9UGJ0 569 aa15.86■□□□□ 0.13
RABGGTA-213ENST00000560127 DDX20Q9UHI6 824 aaKnown RBP15.86■□□□□ 0.13
RABGGTA-213ENST00000560127 A0A1B0GUL7 405 aa15.85■□□□□ 0.13
RABGGTA-213ENST00000560127 USP17L10C9JJH3 530 aa15.85■□□□□ 0.13
RABGGTA-213ENST00000560127 DNM1LO00429 736 aa15.85■□□□□ 0.13
RABGGTA-213ENST00000560127 LDHCP07864 332 aa15.85■□□□□ 0.13
RABGGTA-213ENST00000560127 GSTO1P78417 241 aa15.85■□□□□ 0.13
RABGGTA-213ENST00000560127 PI16Q6UXB8 463 aa15.85■□□□□ 0.13
RABGGTA-213ENST00000560127 TEX11Q8IYF3 940 aa15.85■□□□□ 0.13
RABGGTA-213ENST00000560127 GTF3C2Q8WUA4 911 aaPredicted RBP15.85■□□□□ 0.13
RABGGTA-213ENST00000560127 EDC3Q96F86 508 aaKnown RBP15.85■□□□□ 0.13
RABGGTA-213ENST00000560127 HMG20BQ9P0W2 317 aa15.85■□□□□ 0.13
RABGGTA-213ENST00000560127 NDUFB9Q9Y6M9 179 aa15.85■□□□□ 0.13
RABGGTA-213ENST00000560127 CNMDO75829 334 aa15.84■□□□□ 0.13
RABGGTA-213ENST00000560127 GDF11O95390 407 aa15.84■□□□□ 0.13
RABGGTA-213ENST00000560127 UBTFL1P0CB47 393 aaPredicted RBP15.84■□□□□ 0.13
RABGGTA-213ENST00000560127 FOSL2P15408 326 aa15.84■□□□□ 0.13
RABGGTA-213ENST00000560127 SMAD3P84022 425 aaKnown RBP15.84■□□□□ 0.13
RABGGTA-213ENST00000560127 MFSD14CQ5VZR4 134 aa15.84■□□□□ 0.13
RABGGTA-213ENST00000560127 TRPV1Q8NER1 839 aa15.84■□□□□ 0.13
RABGGTA-213ENST00000560127 SH3RF3Q8TEJ3 882 aaPredicted RBP15.84■□□□□ 0.13
RABGGTA-213ENST00000560127 SYMPKQ92797 1274 aaKnown RBP15.84■□□□□ 0.13
RABGGTA-213ENST00000560127 EMILIN3Q9NT22 766 aa15.84■□□□□ 0.13
RABGGTA-213ENST00000560127 ATP11BQ9Y2G3 1177 aa15.84■□□□□ 0.13
RABGGTA-213ENST00000560127 CHD9Q3L8U1 2897 aa15.84■□□□□ 0.13
RABGGTA-213ENST00000560127 MSCO60682 206 aa15.83■□□□□ 0.12
RABGGTA-213ENST00000560127 COL9A1P20849 921 aa15.83■□□□□ 0.12
RABGGTA-213ENST00000560127 CNGA1P29973 690 aa15.83■□□□□ 0.12
RABGGTA-213ENST00000560127 MVPQ14764 893 aaKnown RBP15.83■□□□□ 0.12
RABGGTA-213ENST00000560127 METTL16Q86W50 562 aaKnown RBP15.83■□□□□ 0.12
RABGGTA-213ENST00000560127 BADQ92934 168 aa15.83■□□□□ 0.12
RABGGTA-213ENST00000560127 DHX36Q9H2U1 1008 aaKnown RBP15.83■□□□□ 0.12
RABGGTA-213ENST00000560127 ZBTB21Q9ULJ3 1066 aa15.83■□□□□ 0.12
RABGGTA-213ENST00000560127 RABGAP1Q9Y3P9 1069 aa15.83■□□□□ 0.12
RABGGTA-213ENST00000560127 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.83■□□□□ 0.12
RABGGTA-213ENST00000560127 SLC15A5A6NIM6 579 aa15.82■□□□□ 0.12
RABGGTA-213ENST00000560127 IGHA2P01877 340 aa15.82■□□□□ 0.12
RABGGTA-213ENST00000560127 HOXC6P09630 235 aa15.82■□□□□ 0.12
RABGGTA-213ENST00000560127 PTPREP23469 700 aa15.82■□□□□ 0.12
RABGGTA-213ENST00000560127 GJC2Q5T442 439 aaPredicted RBP15.82■□□□□ 0.12
RABGGTA-213ENST00000560127 USP17L2Q6R6M4 530 aa15.82■□□□□ 0.12
RABGGTA-213ENST00000560127 SLC39A5Q6ZMH5 540 aa15.82■□□□□ 0.12
RABGGTA-213ENST00000560127 SPATA5Q8NB90 893 aa15.82■□□□□ 0.12
RABGGTA-213ENST00000560127 CWC22Q9HCG8 908 aaKnown RBP15.82■□□□□ 0.12
RABGGTA-213ENST00000560127 PRDM5Q9NQX1 630 aaPredicted RBP15.82■□□□□ 0.12
RABGGTA-213ENST00000560127 GINM1Q9NU53 330 aa15.82■□□□□ 0.12
RABGGTA-213ENST00000560127 RAI14Q9P0K7 980 aa15.82■□□□□ 0.12
RABGGTA-213ENST00000560127 ZNF521Q96K83 1311 aa15.82■□□□□ 0.12
RABGGTA-213ENST00000560127 GLRX3O76003 335 aaKnown RBP15.81■□□□□ 0.12
RABGGTA-213ENST00000560127 CYP2C19P33261 490 aa15.81■□□□□ 0.12
RABGGTA-213ENST00000560127 ATP2B2Q01814 1243 aa15.81■□□□□ 0.12
RABGGTA-213ENST00000560127 TFCP2Q12800 502 aa15.81■□□□□ 0.12
RABGGTA-213ENST00000560127 NPLOC4Q8TAT6 608 aa15.81■□□□□ 0.12
RABGGTA-213ENST00000560127 ZNF236Q9UL36 1845 aa15.81■□□□□ 0.12
RABGGTA-213ENST00000560127 AKAP2Q9Y2D5 859 aa15.81■□□□□ 0.12
RABGGTA-213ENST00000560127 REV3LO60673 3130 aa15.8■□□□□ 0.12
RABGGTA-213ENST00000560127 CYBAP13498 195 aa15.8■□□□□ 0.12
RABGGTA-213ENST00000560127 CCNA1P78396 465 aa15.8■□□□□ 0.12
RABGGTA-213ENST00000560127 GRB14Q14449 540 aa15.8■□□□□ 0.12
RABGGTA-213ENST00000560127 SNX17Q15036 470 aa15.8■□□□□ 0.12
RABGGTA-213ENST00000560127 TRIM60Q495X7 471 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms