RNA–Protein interactions for RNA: ENST00000559971.5

APH1B-207, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 1 (best)

Gene APH1B, Length 1,455 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-207ENST00000559971 SFPQP23246 707 aaKnown RBP eCLIP18.67■□□□□ 0.58
APH1B-207ENST00000559971 TRAPPC10P48553 1259 aa18.67■□□□□ 0.58
APH1B-207ENST00000559971 GSTO1P78417 241 aa18.67■□□□□ 0.58
APH1B-207ENST00000559971 NCAPHQ15003 741 aa18.67■□□□□ 0.58
APH1B-207ENST00000559971 CTCFLQ8NI51 663 aaPredicted RBP18.67■□□□□ 0.58
APH1B-207ENST00000559971 NSUN4Q96CB9 384 aaKnown RBP18.67■□□□□ 0.58
APH1B-207ENST00000559971 INCENPQ9NQS7 918 aa18.67■□□□□ 0.58
APH1B-207ENST00000559971 AATFQ9NY61 560 aaKnown RBP eCLIP18.67■□□□□ 0.58
APH1B-207ENST00000559971 FBXO2Q9UK22 296 aaPredicted RBP18.67■□□□□ 0.58
APH1B-207ENST00000559971 CTIFO43310 598 aaKnown RBP18.66■□□□□ 0.58
APH1B-207ENST00000559971 KIF5BP33176 963 aa18.66■□□□□ 0.58
APH1B-207ENST00000559971 HSPA1LP34931 641 aa18.66■□□□□ 0.58
APH1B-207ENST00000559971 FANCCQ00597 558 aa18.66■□□□□ 0.58
APH1B-207ENST00000559971 PTPN14Q15678 1187 aa18.66■□□□□ 0.58
APH1B-207ENST00000559971 FILIP1Q7Z7B0 1213 aa18.66■□□□□ 0.58
APH1B-207ENST00000559971 ENAHQ8N8S7 591 aaPredicted RBP18.66■□□□□ 0.58
APH1B-207ENST00000559971 NKX2-3Q8TAU0 364 aa18.66■□□□□ 0.58
APH1B-207ENST00000559971 SDR42E1Q8WUS8 393 aa18.66■□□□□ 0.58
APH1B-207ENST00000559971 IFNKQ9P0W0 207 aa18.66■□□□□ 0.58
APH1B-207ENST00000559971 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.66■□□□□ 0.58
APH1B-207ENST00000559971 LEMD3Q9Y2U8 911 aa18.66■□□□□ 0.58
APH1B-207ENST00000559971 RTCBQ9Y3I0 505 aaKnown RBP18.66■□□□□ 0.58
APH1B-207ENST00000559971 DUOX1Q9NRD9 1551 aa18.66■□□□□ 0.58
APH1B-207ENST00000559971 KCNQ2O43526 872 aa18.65■□□□□ 0.58
APH1B-207ENST00000559971 POSTNQ15063 836 aa18.65■□□□□ 0.58
APH1B-207ENST00000559971 TBC1D9BQ66K14 1250 aa18.65■□□□□ 0.58
APH1B-207ENST00000559971 CTR9Q6PD62 1173 aa18.65■□□□□ 0.58
APH1B-207ENST00000559971 AMOTL1Q8IY63 956 aa18.65■□□□□ 0.58
APH1B-207ENST00000559971 STK11IPQ8N1F8 1099 aa18.65■□□□□ 0.58
APH1B-207ENST00000559971 WDR66Q8TBY9 1149 aa18.65■□□□□ 0.58
APH1B-207ENST00000559971 SMARCE1Q969G3 411 aa18.65■□□□□ 0.58
APH1B-207ENST00000559971 ZKSCAN3Q9BRR0 538 aa18.65■□□□□ 0.58
APH1B-207ENST00000559971 PHF20Q9BVI0 1012 aa18.65■□□□□ 0.58
APH1B-207ENST00000559971 XPO4Q9C0E2 1151 aaKnown RBP18.65■□□□□ 0.58
APH1B-207ENST00000559971 GNAQP50148 359 aa18.65■□□□□ 0.58
APH1B-207ENST00000559971 TOB1P50616 345 aaPredicted RBP18.65■□□□□ 0.58
APH1B-207ENST00000559971 CCZ1BP86790 482 aa18.65■□□□□ 0.58
APH1B-207ENST00000559971 CCZ1P86791 482 aaPredicted RBP18.65■□□□□ 0.58
APH1B-207ENST00000559971 CEP135Q66GS9 1140 aa18.65■□□□□ 0.58
APH1B-207ENST00000559971 FCHSD1Q86WN1 690 aa18.65■□□□□ 0.58
APH1B-207ENST00000559971 CELF1Q92879 486 aaKnown RBP18.65■□□□□ 0.58
APH1B-207ENST00000559971 CACNA1SQ13698 1873 aa18.64■□□□□ 0.58
APH1B-207ENST00000559971 A0A1B0GUL6 1792 aa18.64■□□□□ 0.57
APH1B-207ENST00000559971 BIN1O00499 593 aa18.64■□□□□ 0.57
APH1B-207ENST00000559971 RIOK3O14730 519 aaKnown RBP18.64■□□□□ 0.57
APH1B-207ENST00000559971 LDHCP07864 332 aa18.64■□□□□ 0.57
APH1B-207ENST00000559971 CALML3P27482 149 aa18.64■□□□□ 0.57
APH1B-207ENST00000559971 GUCY1A2P33402 732 aa18.64■□□□□ 0.57
APH1B-207ENST00000559971 UBASH3AP57075 661 aa18.64■□□□□ 0.57
APH1B-207ENST00000559971 MDM2Q00987 491 aaPredicted RBP18.64■□□□□ 0.57
APH1B-207ENST00000559971 LONRF3Q496Y0 759 aa18.64■□□□□ 0.57
APH1B-207ENST00000559971 C15orf52Q6ZUT6 534 aaKnown RBP18.64■□□□□ 0.57
APH1B-207ENST00000559971 TMTC3Q6ZXV5 915 aa18.64■□□□□ 0.57
APH1B-207ENST00000559971 ADGRA1Q86SQ6 560 aa18.64■□□□□ 0.57
APH1B-207ENST00000559971 METTL16Q86W50 562 aaKnown RBP18.64■□□□□ 0.57
APH1B-207ENST00000559971 ENOX1Q8TC92 643 aaKnown RBP18.64■□□□□ 0.57
APH1B-207ENST00000559971 CLIC6Q96NY7 704 aa18.64■□□□□ 0.57
APH1B-207ENST00000559971 BCL2L12Q9HB09 334 aa18.64■□□□□ 0.57
APH1B-207ENST00000559971 KCNJ14Q9UNX9 436 aa18.64■□□□□ 0.57
APH1B-207ENST00000559971 PCDHA5Q9Y5H7 936 aa18.64■□□□□ 0.57
APH1B-207ENST00000559971 COL24A1Q17RW2 1714 aa18.63■□□□□ 0.57
APH1B-207ENST00000559971 ECM29Q5VYK3 1845 aa18.63■□□□□ 0.57
APH1B-207ENST00000559971 USP17L12C9JPN9 530 aa18.63■□□□□ 0.57
APH1B-207ENST00000559971 USP17L21D6R901 530 aa18.63■□□□□ 0.57
APH1B-207ENST00000559971 SERPINC1P01008 464 aa18.63■□□□□ 0.57
APH1B-207ENST00000559971 ERCC5P28715 1186 aaPredicted RBP18.63■□□□□ 0.57
APH1B-207ENST00000559971 SARSP49591 514 aaKnown RBP18.63■□□□□ 0.57
APH1B-207ENST00000559971 MECOMQ03112 1051 aa18.63■□□□□ 0.57
APH1B-207ENST00000559971 FUT2Q10981 343 aa18.63■□□□□ 0.57
APH1B-207ENST00000559971 TROAPQ12815 778 aa18.63■□□□□ 0.57
APH1B-207ENST00000559971 FAM98CQ17RN3 349 aaKnown RBP18.63■□□□□ 0.57
APH1B-207ENST00000559971 TMC6Q7Z403 805 aa18.63■□□□□ 0.57
APH1B-207ENST00000559971 CCAR2Q8N163 923 aaKnown RBP18.63■□□□□ 0.57
APH1B-207ENST00000559971 KIF18AQ8NI77 898 aa18.63■□□□□ 0.57
APH1B-207ENST00000559971 ZNF287Q9HBT7 754 aa18.63■□□□□ 0.57
APH1B-207ENST00000559971 SH3GLB2Q9NR46 395 aa18.63■□□□□ 0.57
APH1B-207ENST00000559971 IQSEC3Q9UPP2 1182 aaPredicted RBP18.63■□□□□ 0.57
APH1B-207ENST00000559971 COL1A1P02452 1464 aaPredicted RBP18.63■□□□□ 0.57
APH1B-207ENST00000559971 BAG3O95817 575 aa18.62■□□□□ 0.57
APH1B-207ENST00000559971 DYNLL1P63167 89 aaKnown RBP18.62■□□□□ 0.57
APH1B-207ENST00000559971 RBM10P98175 930 aaKnown RBP18.62■□□□□ 0.57
APH1B-207ENST00000559971 SEMA3FQ13275 785 aa18.62■□□□□ 0.57
APH1B-207ENST00000559971 PNOCQ13519 176 aa18.62■□□□□ 0.57
APH1B-207ENST00000559971 NYAP1Q6ZVC0 841 aa18.62■□□□□ 0.57
APH1B-207ENST00000559971 ANKS1AQ92625 1134 aa18.62■□□□□ 0.57
APH1B-207ENST00000559971 ERCC4Q92889 916 aaPredicted RBP18.62■□□□□ 0.57
APH1B-207ENST00000559971 C16orf45Q96MC5 204 aaPredicted RBP18.62■□□□□ 0.57
APH1B-207ENST00000559971 CABP5Q9NP86 173 aa18.62■□□□□ 0.57
APH1B-207ENST00000559971 DCP1AQ9NPI6 582 aaPredicted RBP18.62■□□□□ 0.57
APH1B-207ENST00000559971 MAST2Q6P0Q8 1798 aa18.61■□□□□ 0.57
APH1B-207ENST00000559971 ADRA2BP18089 450 aa18.61■□□□□ 0.57
APH1B-207ENST00000559971 PKN1Q16512 942 aa18.61■□□□□ 0.57
APH1B-207ENST00000559971 GALNT17Q6IS24 598 aa18.61■□□□□ 0.57
APH1B-207ENST00000559971 C3orf67Q6ZVT6 689 aa18.61■□□□□ 0.57
APH1B-207ENST00000559971 DGKHQ86XP1 1220 aa18.61■□□□□ 0.57
APH1B-207ENST00000559971 FNBP4Q8N3X1 1017 aaPredicted RBP18.61■□□□□ 0.57
APH1B-207ENST00000559971 SPATA20Q8TB22 786 aa18.61■□□□□ 0.57
APH1B-207ENST00000559971 NGLY1Q96IV0 654 aa18.61■□□□□ 0.57
APH1B-207ENST00000559971 DLEC1Q9Y238 1755 aa18.6■□□□□ 0.57
APH1B-207ENST00000559971 POLR2DO15514 142 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms