RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 BOLA2Q9H3K6 86 aa24.81■■□□□ 1.56
CHRNA3-207ENST00000559941 PAG1Q9NWQ8 432 aa24.81■■□□□ 1.56
CHRNA3-207ENST00000559941 ZNF532Q9HCE3 1301 aa24.81■■□□□ 1.56
CHRNA3-207ENST00000559941 DOCK3Q8IZD9 2030 aa24.8■■□□□ 1.56
CHRNA3-207ENST00000559941 TCRBV5S4A2TA0A5A2 114 aa24.8■■□□□ 1.56
CHRNA3-207ENST00000559941 PABPC4Q13310 644 aaKnown RBP eCLIP24.8■■□□□ 1.56
CHRNA3-207ENST00000559941 SH3TC2Q8TF17 1288 aa24.8■■□□□ 1.56
CHRNA3-207ENST00000559941 TMEM106CQ9BVX2 250 aa24.8■■□□□ 1.56
CHRNA3-207ENST00000559941 EHD4Q9H223 541 aa24.8■■□□□ 1.56
CHRNA3-207ENST00000559941 ZBTB21Q9ULJ3 1066 aa24.8■■□□□ 1.56
CHRNA3-207ENST00000559941 BACE1P56817 501 aa24.79■■□□□ 1.56
CHRNA3-207ENST00000559941 SHROOM1Q2M3G4 852 aaPredicted RBP24.79■■□□□ 1.56
CHRNA3-207ENST00000559941 TATDN1Q6P1N9 297 aa24.79■■□□□ 1.56
CHRNA3-207ENST00000559941 HAUS7Q99871 368 aa24.79■■□□□ 1.56
CHRNA3-207ENST00000559941 SERPINB13Q9UIV8 391 aa24.79■■□□□ 1.56
CHRNA3-207ENST00000559941 MYPNQ86TC9 1320 aa24.79■■□□□ 1.56
CHRNA3-207ENST00000559941 SMARCA5O60264 1052 aaPredicted RBP24.78■■□□□ 1.56
CHRNA3-207ENST00000559941 CRNKL1Q9BZJ0 848 aaKnown RBP24.78■■□□□ 1.56
CHRNA3-207ENST00000559941 DCTPP1Q9H773 170 aa24.78■■□□□ 1.56
CHRNA3-207ENST00000559941 C19orf81C9J6K1 198 aa24.77■■□□□ 1.56
CHRNA3-207ENST00000559941 USP17L10C9JJH3 530 aa24.77■■□□□ 1.56
CHRNA3-207ENST00000559941 MTMR2Q13614 643 aa24.77■■□□□ 1.56
CHRNA3-207ENST00000559941 RAET1EQ8TD07 263 aa24.77■■□□□ 1.56
CHRNA3-207ENST00000559941 EN2P19622 333 aaPredicted RBP24.76■■□□□ 1.55
CHRNA3-207ENST00000559941 ADD2P35612 726 aa24.76■■□□□ 1.55
CHRNA3-207ENST00000559941 GCLCP48506 637 aaPredicted RBP24.76■■□□□ 1.55
CHRNA3-207ENST00000559941 PLCD1P51178 756 aa24.76■■□□□ 1.55
CHRNA3-207ENST00000559941 FAM110CQ1W6H9 321 aa24.76■■□□□ 1.55
CHRNA3-207ENST00000559941 ANKRD13CQ8N6S4 541 aa24.76■■□□□ 1.55
CHRNA3-207ENST00000559941 ASCC2Q9H1I8 757 aaPredicted RBP24.76■■□□□ 1.55
CHRNA3-207ENST00000559941 TMOD4Q9NZQ9 345 aa24.76■■□□□ 1.55
CHRNA3-207ENST00000559941 GH2P01242 217 aa24.75■■□□□ 1.55
CHRNA3-207ENST00000559941 PRKCZQ05513 592 aa24.75■■□□□ 1.55
CHRNA3-207ENST00000559941 BRCA2P51587 3418 aa24.75■■□□□ 1.55
CHRNA3-207ENST00000559941 POLR3DP05423 398 aaPredicted RBP24.74■■□□□ 1.55
CHRNA3-207ENST00000559941 HOXA7P31268 230 aaPredicted RBP24.74■■□□□ 1.55
CHRNA3-207ENST00000559941 GRK4P32298 578 aa24.74■■□□□ 1.55
CHRNA3-207ENST00000559941 LCORLQ8N3X6 602 aa24.74■■□□□ 1.55
CHRNA3-207ENST00000559941 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.74■■□□□ 1.55
CHRNA3-207ENST00000559941 GABRQQ9UN88 632 aa24.74■■□□□ 1.55
CHRNA3-207ENST00000559941 BAZ2AQ9UIF9 1905 aaKnown RBP24.73■■□□□ 1.55
CHRNA3-207ENST00000559941 SHMT1P34896 483 aa24.73■■□□□ 1.55
CHRNA3-207ENST00000559941 GABPAQ06546 454 aa24.73■■□□□ 1.55
CHRNA3-207ENST00000559941 CERKLQ49MI3 558 aaPredicted RBP24.73■■□□□ 1.55
CHRNA3-207ENST00000559941 SDR42E1Q8WUS8 393 aa24.73■■□□□ 1.55
CHRNA3-207ENST00000559941 DCP1AQ9NPI6 582 aaPredicted RBP24.73■■□□□ 1.55
CHRNA3-207ENST00000559941 MCM9Q9NXL9 1143 aa24.73■■□□□ 1.55
CHRNA3-207ENST00000559941 MYCP01106 439 aaPredicted RBP24.72■■□□□ 1.55
CHRNA3-207ENST00000559941 ARMT1Q9H993 441 aa24.72■■□□□ 1.55
CHRNA3-207ENST00000559941 ECHDC1Q9NTX5 307 aa24.72■■□□□ 1.55
CHRNA3-207ENST00000559941 MYH8P13535 1937 aa24.71■■□□□ 1.55
CHRNA3-207ENST00000559941 TNPO2O14787 897 aaKnown RBP24.71■■□□□ 1.55
CHRNA3-207ENST00000559941 RRP1P56182 461 aaKnown RBP24.71■■□□□ 1.55
CHRNA3-207ENST00000559941 IRX3P78415 501 aaPredicted RBP24.71■■□□□ 1.55
CHRNA3-207ENST00000559941 UBE3CQ15386 1083 aa24.71■■□□□ 1.55
CHRNA3-207ENST00000559941 ABCB5Q2M3G0 1257 aa24.71■■□□□ 1.55
CHRNA3-207ENST00000559941 SLFNL1Q499Z3 407 aa24.71■■□□□ 1.55
CHRNA3-207ENST00000559941 USP17L2Q6R6M4 530 aa24.71■■□□□ 1.55
CHRNA3-207ENST00000559941 CABP5Q9NP86 173 aa24.71■■□□□ 1.55
CHRNA3-207ENST00000559941 EMILIN3Q9NT22 766 aa24.71■■□□□ 1.55
CHRNA3-207ENST00000559941 MBD4O95243 580 aa24.7■■□□□ 1.54
CHRNA3-207ENST00000559941 FLT3LGP49771 235 aa24.7■■□□□ 1.54
CHRNA3-207ENST00000559941 MTFR1Q15390 333 aa24.7■■□□□ 1.54
CHRNA3-207ENST00000559941 ZSCAN25Q6NSZ9 544 aa24.7■■□□□ 1.54
CHRNA3-207ENST00000559941 SLAIN1Q8ND83 568 aa24.7■■□□□ 1.54
CHRNA3-207ENST00000559941 COA7Q96BR5 231 aa24.7■■□□□ 1.54
CHRNA3-207ENST00000559941 P2RX7Q99572 595 aaKnown RBP24.7■■□□□ 1.54
CHRNA3-207ENST00000559941 MORF4L1Q9UBU8 362 aa24.7■■□□□ 1.54
CHRNA3-207ENST00000559941 PCDHB15Q9Y5E8 787 aa24.7■■□□□ 1.54
CHRNA3-207ENST00000559941 MKI67P46013 3256 aaKnown RBP24.69■■□□□ 1.54
CHRNA3-207ENST00000559941 CHGBP05060 677 aa24.69■■□□□ 1.54
CHRNA3-207ENST00000559941 IRF5Q13568 498 aa24.69■■□□□ 1.54
CHRNA3-207ENST00000559941 RAB3GAP1Q15042 981 aa24.69■■□□□ 1.54
CHRNA3-207ENST00000559941 PRPF38BQ5VTL8 546 aaKnown RBP24.69■■□□□ 1.54
CHRNA3-207ENST00000559941 C12orf42Q96LP6 360 aa24.69■■□□□ 1.54
CHRNA3-207ENST00000559941 ATP8A2Q9NTI2 1148 aa24.69■■□□□ 1.54
CHRNA3-207ENST00000559941 PRKAB2O43741 272 aa24.68■■□□□ 1.54
CHRNA3-207ENST00000559941 UBXN2AP68543 259 aa24.68■■□□□ 1.54
CHRNA3-207ENST00000559941 EVX2Q03828 476 aa24.68■■□□□ 1.54
CHRNA3-207ENST00000559941 PXYLP1Q8TE99 480 aa24.68■■□□□ 1.54
CHRNA3-207ENST00000559941 BIN2Q9UBW5 565 aaPredicted RBP24.68■■□□□ 1.54
CHRNA3-207ENST00000559941 TAOK2Q9UL54 1235 aa24.68■■□□□ 1.54
CHRNA3-207ENST00000559941 ADCY3O60266 1144 aa24.67■■□□□ 1.54
CHRNA3-207ENST00000559941 HERVK_113P62684 666 aa24.67■■□□□ 1.54
CHRNA3-207ENST00000559941 GPATCH3Q96I76 525 aa24.67■■□□□ 1.54
CHRNA3-207ENST00000559941 CYP2D6P10635 497 aa24.66■■□□□ 1.54
CHRNA3-207ENST00000559941 GUCY1A2P33402 732 aa24.66■■□□□ 1.54
CHRNA3-207ENST00000559941 USP14P54578 494 aa24.66■■□□□ 1.54
CHRNA3-207ENST00000559941 FEZ1Q99689 392 aa24.66■■□□□ 1.54
CHRNA3-207ENST00000559941 KIAA1683Q9H0B3 1180 aa24.66■■□□□ 1.54
CHRNA3-207ENST00000559941 PLXNB2O15031 1838 aa24.65■■□□□ 1.54
CHRNA3-207ENST00000559941 CCL5P13501 91 aa24.65■■□□□ 1.54
CHRNA3-207ENST00000559941 ACER1Q8TDN7 264 aa24.65■■□□□ 1.54
CHRNA3-207ENST00000559941 GTF3C2Q8WUA4 911 aaPredicted RBP24.65■■□□□ 1.54
CHRNA3-207ENST00000559941 PUS7LQ9H0K6 701 aaKnown RBP24.65■■□□□ 1.54
CHRNA3-207ENST00000559941 SWAP70Q9UH65 585 aa24.65■■□□□ 1.54
CHRNA3-207ENST00000559941 GJB1P08034 283 aa24.64■■□□□ 1.54
CHRNA3-207ENST00000559941 ELNP15502 786 aa24.64■■□□□ 1.54
CHRNA3-207ENST00000559941 SEPT2Q15019 361 aa24.64■■□□□ 1.54
CHRNA3-207ENST00000559941 ZYXQ15942 572 aaKnown RBP24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms