RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 NSFL1CQ9UNZ2 370 aaKnown RBP6.38□□□□□ -1.39
SPG11-220ENST00000559933 ATP6V0A2Q9Y487 856 aa6.38□□□□□ -1.39
SPG11-220ENST00000559933 MYO5AQ9Y4I1 1855 aaKnown RBP6.37□□□□□ -1.39
SPG11-220ENST00000559933 ZNF804BA4D1E1 1349 aa6.37□□□□□ -1.39
SPG11-220ENST00000559933 XDHP47989 1333 aa6.37□□□□□ -1.39
SPG11-220ENST00000559933 FIGNL2A6NMB9 653 aa6.37□□□□□ -1.39
SPG11-220ENST00000559933 SPINT1O43278 529 aa6.37□□□□□ -1.39
SPG11-220ENST00000559933 FBXO45P0C2W1 286 aa6.37□□□□□ -1.39
SPG11-220ENST00000559933 SLC5A1P13866 664 aa6.37□□□□□ -1.39
SPG11-220ENST00000559933 DPP8Q6V1X1 898 aaPredicted RBP6.37□□□□□ -1.39
SPG11-220ENST00000559933 TTLL6Q8N841 843 aa6.37□□□□□ -1.39
SPG11-220ENST00000559933 TBC1D16Q8TBP0 767 aa6.37□□□□□ -1.39
SPG11-220ENST00000559933 LPIN2Q92539 896 aa6.37□□□□□ -1.39
SPG11-220ENST00000559933 DNAJC2Q99543 621 aaKnown RBP6.37□□□□□ -1.39
SPG11-220ENST00000559933 ANTXR1Q9H6X2 564 aa6.37□□□□□ -1.39
SPG11-220ENST00000559933 ZNF277Q9NRM2 450 aaPredicted RBP6.37□□□□□ -1.39
SPG11-220ENST00000559933 DNMT3LQ9UJW3 386 aa6.37□□□□□ -1.39
SPG11-220ENST00000559933 BCS1LQ9Y276 419 aa6.37□□□□□ -1.39
SPG11-220ENST00000559933 AKAP11Q9UKA4 1901 aa6.37□□□□□ -1.39
SPG11-220ENST00000559933 MYH13Q9UKX3 1938 aa6.37□□□□□ -1.39
SPG11-220ENST00000559933 ADAMTSL1Q8N6G6 1762 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 FAM181BA6NEQ2 426 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 ESPNB1AK53 854 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 BBOX1O75936 387 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 ADH1AP07327 375 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 YBX3P16989 372 aaKnown RBP eCLIP6.36□□□□□ -1.39
SPG11-220ENST00000559933 ALDH1B1P30837 517 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 GMPRP36959 345 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 MCAMP43121 646 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 ZAP70P43403 619 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 PRELPP51888 382 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 TGFB2P61812 414 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 CHAF1AQ13111 956 aaPredicted RBP6.36□□□□□ -1.39
SPG11-220ENST00000559933 RASGRF1Q13972 1273 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 AOC3Q16853 763 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 TTC39AQ5SRH9 613 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 GORABQ5T7V8 394 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 CCDC102BQ68D86 513 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 SP8Q8IXZ3 490 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 MTMR14Q8NCE2 650 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 CNKSR1Q969H4 720 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 RILPL2Q969X0 211 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 MXD3Q9BW11 206 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 ZNF395Q9H8N7 513 aaPredicted RBP6.36□□□□□ -1.39
SPG11-220ENST00000559933 DBNDD1Q9H9R9 158 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 GPR108Q9NPR9 543 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 PIH1D3Q9NQM4 214 aaKnown RBP6.36□□□□□ -1.39
SPG11-220ENST00000559933 KCNQ5Q9NR82 932 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 ECHDC1Q9NTX5 307 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 STK17AQ9UEE5 414 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 STAP2Q9UGK3 403 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 GGA1Q9UJY5 639 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 AKAP2Q9Y2D5 859 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 CD2APQ9Y5K6 639 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 CHD4Q14839 1912 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 AK9Q5TCS8 1911 aa6.36□□□□□ -1.39
SPG11-220ENST00000559933 ZNF646O15015 1829 aaPredicted RBP6.36□□□□□ -1.39
SPG11-220ENST00000559933 SCN9AQ15858 1988 aa6.35□□□□□ -1.39
SPG11-220ENST00000559933 FER1L6Q2WGJ9 1857 aa6.35□□□□□ -1.39
SPG11-220ENST00000559933 ARFGEF1Q9Y6D6 1849 aa6.35□□□□□ -1.39
SPG11-220ENST00000559933 NFKBIEO00221 500 aa6.35□□□□□ -1.39
SPG11-220ENST00000559933 GOLIM4O00461 696 aa6.35□□□□□ -1.39
SPG11-220ENST00000559933 IFIT1P09914 478 aaKnown RBP6.35□□□□□ -1.39
SPG11-220ENST00000559933 SDSP20132 328 aa6.35□□□□□ -1.39
SPG11-220ENST00000559933 ATP2B4P23634 1241 aa6.35□□□□□ -1.39
SPG11-220ENST00000559933 FKBP4Q02790 459 aaKnown RBP eCLIP6.35□□□□□ -1.39
SPG11-220ENST00000559933 UBE4AQ14139 1066 aa6.35□□□□□ -1.39
SPG11-220ENST00000559933 GRIK5Q16478 980 aa6.35□□□□□ -1.39
SPG11-220ENST00000559933 CCDC93Q567U6 631 aa6.35□□□□□ -1.39
SPG11-220ENST00000559933 DALRD3Q5D0E6 543 aaKnown RBP6.35□□□□□ -1.39
SPG11-220ENST00000559933 TBC1D9Q6ZT07 1266 aa6.35□□□□□ -1.39
SPG11-220ENST00000559933 FAM84BQ96KN1 310 aaPredicted RBP6.35□□□□□ -1.39
SPG11-220ENST00000559933 INSM2Q96T92 566 aaPredicted RBP6.35□□□□□ -1.39
SPG11-220ENST00000559933 SYT17Q9BSW7 474 aa6.35□□□□□ -1.39
SPG11-220ENST00000559933 ANKRD2Q9GZV1 360 aa6.35□□□□□ -1.39
SPG11-220ENST00000559933 IL25Q9H293 177 aa6.35□□□□□ -1.39
SPG11-220ENST00000559933 CYLDQ9NQC7 956 aa6.35□□□□□ -1.39
SPG11-220ENST00000559933 PODXL2Q9NZ53 605 aa6.35□□□□□ -1.39
SPG11-220ENST00000559933 HMG20BQ9P0W2 317 aa6.35□□□□□ -1.39
SPG11-220ENST00000559933 PIM2Q9P1W9 311 aa6.35□□□□□ -1.39
SPG11-220ENST00000559933 DOCK2Q92608 1830 aa6.34□□□□□ -1.39
SPG11-220ENST00000559933 MED23Q9ULK4 1368 aa6.34□□□□□ -1.39
SPG11-220ENST00000559933 AOX1Q06278 1338 aa6.34□□□□□ -1.39
SPG11-220ENST00000559933 TTC41PQ6P2S7 1318 aa6.34□□□□□ -1.39
SPG11-220ENST00000559933 PPFIA3O75145 1194 aa6.34□□□□□ -1.39
SPG11-220ENST00000559933 ARID4AP29374 1257 aaPredicted RBP6.34□□□□□ -1.39
SPG11-220ENST00000559933 WASHC4Q2M389 1173 aa6.34□□□□□ -1.39
SPG11-220ENST00000559933 C8orf34Q49A92 452 aa6.34□□□□□ -1.39
SPG11-220ENST00000559933 FBXO33Q7Z6M2 555 aa6.34□□□□□ -1.39
SPG11-220ENST00000559933 GPATCH3Q96I76 525 aa6.34□□□□□ -1.39
SPG11-220ENST00000559933 OSBPL3Q9H4L5 887 aa6.34□□□□□ -1.39
SPG11-220ENST00000559933 LEMD3Q9Y2U8 911 aa6.34□□□□□ -1.39
SPG11-220ENST00000559933 YDJCA8MPS7 323 aa6.33□□□□□ -1.4
SPG11-220ENST00000559933 PPIP5K2O43314 1243 aa6.33□□□□□ -1.4
SPG11-220ENST00000559933 ECE2O60344 883 aa6.33□□□□□ -1.4
SPG11-220ENST00000559933 GLRX3O76003 335 aaKnown RBP6.33□□□□□ -1.4
SPG11-220ENST00000559933 CYP2E1P05181 493 aaPredicted RBP6.33□□□□□ -1.4
SPG11-220ENST00000559933 PRKCSHP14314 528 aaPredicted RBP6.33□□□□□ -1.4
SPG11-220ENST00000559933 ATP5JP18859 108 aa6.33□□□□□ -1.4
SPG11-220ENST00000559933 HIBADHP31937 336 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms