RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 MEIS3Q99687 375 aa19.32■□□□□ 0.68
AC243562.3-201ENST00000559866 WDR18Q9BV38 432 aa19.32■□□□□ 0.68
AC243562.3-201ENST00000559866 TBC1D2Q9BYX2 928 aa19.32■□□□□ 0.68
AC243562.3-201ENST00000559866 HOXA7P31268 230 aaPredicted RBP19.31■□□□□ 0.68
AC243562.3-201ENST00000559866 BACE1P56817 501 aa19.31■□□□□ 0.68
AC243562.3-201ENST00000559866 MORN1Q5T089 497 aa19.31■□□□□ 0.68
AC243562.3-201ENST00000559866 TEX11Q8IYF3 940 aa19.31■□□□□ 0.68
AC243562.3-201ENST00000559866 SOCS4Q8WXH5 440 aa19.31■□□□□ 0.68
AC243562.3-201ENST00000559866 AS3MTQ9HBK9 375 aa19.31■□□□□ 0.68
AC243562.3-201ENST00000559866 FLRT1Q9NZU1 646 aa19.31■□□□□ 0.68
AC243562.3-201ENST00000559866 MYH1P12882 1939 aa19.3■□□□□ 0.68
AC243562.3-201ENST00000559866 GDF11O95390 407 aa19.3■□□□□ 0.68
AC243562.3-201ENST00000559866 GPR142Q7Z601 462 aa19.3■□□□□ 0.68
AC243562.3-201ENST00000559866 GPRC5AQ8NFJ5 357 aa19.3■□□□□ 0.68
AC243562.3-201ENST00000559866 SMC4Q9NTJ3 1288 aa19.3■□□□□ 0.68
AC243562.3-201ENST00000559866 ERVK-9P63128 1117 aa19.29■□□□□ 0.68
AC243562.3-201ENST00000559866 ERVK-24P63145 666 aa19.29■□□□□ 0.68
AC243562.3-201ENST00000559866 MVPQ14764 893 aaKnown RBP19.29■□□□□ 0.68
AC243562.3-201ENST00000559866 SPATA5Q8NB90 893 aa19.29■□□□□ 0.68
AC243562.3-201ENST00000559866 PAGR1Q9BTK6 254 aa19.29■□□□□ 0.68
AC243562.3-201ENST00000559866 HERC5Q9UII4 1024 aaKnown RBP19.29■□□□□ 0.68
AC243562.3-201ENST00000559866 NDUFB9Q9Y6M9 179 aa19.29■□□□□ 0.68
AC243562.3-201ENST00000559866 CNMDO75829 334 aa19.28■□□□□ 0.68
AC243562.3-201ENST00000559866 MCAMP43121 646 aa19.28■□□□□ 0.68
AC243562.3-201ENST00000559866 ALDH1L2Q3SY69 923 aa19.28■□□□□ 0.68
AC243562.3-201ENST00000559866 FAM109BQ6ICB4 259 aaPredicted RBP19.28■□□□□ 0.68
AC243562.3-201ENST00000559866 ADGRA1Q86SQ6 560 aa19.28■□□□□ 0.68
AC243562.3-201ENST00000559866 APBA2Q99767 749 aa19.28■□□□□ 0.68
AC243562.3-201ENST00000559866 TMOD4Q9NZQ9 345 aa19.28■□□□□ 0.68
AC243562.3-201ENST00000559866 RAI14Q9P0K7 980 aa19.28■□□□□ 0.68
AC243562.3-201ENST00000559866 ARID4AP29374 1257 aaPredicted RBP19.27■□□□□ 0.68
AC243562.3-201ENST00000559866 MAPK4P31152 587 aa19.27■□□□□ 0.68
AC243562.3-201ENST00000559866 SLFN5Q08AF3 891 aa19.27■□□□□ 0.68
AC243562.3-201ENST00000559866 PDE3AQ14432 1141 aa19.27■□□□□ 0.68
AC243562.3-201ENST00000559866 MAPKAPK5Q8IW41 473 aa19.27■□□□□ 0.68
AC243562.3-201ENST00000559866 CDCA7LQ96GN5 454 aa19.27■□□□□ 0.68
AC243562.3-201ENST00000559866 NEUROD6Q96NK8 337 aa19.27■□□□□ 0.68
AC243562.3-201ENST00000559866 EMILIN3Q9NT22 766 aa19.27■□□□□ 0.68
AC243562.3-201ENST00000559866 AATFQ9NY61 560 aaKnown RBP eCLIP19.27■□□□□ 0.68
AC243562.3-201ENST00000559866 NOB1Q9ULX3 412 aaKnown RBP19.27■□□□□ 0.68
AC243562.3-201ENST00000559866 FLT1P17948 1338 aa19.26■□□□□ 0.67
AC243562.3-201ENST00000559866 A0A0G2JMZ2 1700 aa19.26■□□□□ 0.67
AC243562.3-201ENST00000559866 ZNF236Q9UL36 1845 aa19.26■□□□□ 0.67
AC243562.3-201ENST00000559866 ASNSP08243 561 aa19.26■□□□□ 0.67
AC243562.3-201ENST00000559866 RGS2P41220 211 aa19.26■□□□□ 0.67
AC243562.3-201ENST00000559866 ATN1P54259 1190 aaPredicted RBP19.26■□□□□ 0.67
AC243562.3-201ENST00000559866 GSTO1P78417 241 aa19.26■□□□□ 0.67
AC243562.3-201ENST00000559866 PLEKHH3Q7Z736 793 aa19.26■□□□□ 0.67
AC243562.3-201ENST00000559866 SENP6Q9GZR1 1112 aaPredicted RBP19.26■□□□□ 0.67
AC243562.3-201ENST00000559866 PI4KBQ9UBF8 816 aa19.26■□□□□ 0.67
AC243562.3-201ENST00000559866 ZBTB21Q9ULJ3 1066 aa19.26■□□□□ 0.67
AC243562.3-201ENST00000559866 USP17L10C9JJH3 530 aa19.25■□□□□ 0.67
AC243562.3-201ENST00000559866 MAP4K4O95819 1239 aaPredicted RBP19.25■□□□□ 0.67
AC243562.3-201ENST00000559866 LDHCP07864 332 aa19.25■□□□□ 0.67
AC243562.3-201ENST00000559866 METTL16Q86W50 562 aaKnown RBP19.25■□□□□ 0.67
AC243562.3-201ENST00000559866 TRMT44Q8IYL2 757 aaKnown RBP19.25■□□□□ 0.67
AC243562.3-201ENST00000559866 TGFBRAP1Q8WUH2 860 aa19.25■□□□□ 0.67
AC243562.3-201ENST00000559866 HDAC5Q9UQL6 1122 aa19.25■□□□□ 0.67
AC243562.3-201ENST00000559866 SRGAP3O43295 1099 aa19.24■□□□□ 0.67
AC243562.3-201ENST00000559866 MAP2K5Q13163 448 aa19.24■□□□□ 0.67
AC243562.3-201ENST00000559866 C9orf50Q5SZB4 431 aa19.24■□□□□ 0.67
AC243562.3-201ENST00000559866 TRPV1Q8NER1 839 aa19.24■□□□□ 0.67
AC243562.3-201ENST00000559866 SNRKQ9NRH2 765 aa19.24■□□□□ 0.67
AC243562.3-201ENST00000559866 PALD1Q9ULE6 856 aa19.24■□□□□ 0.67
AC243562.3-201ENST00000559866 AKAP2Q9Y2D5 859 aa19.24■□□□□ 0.67
AC243562.3-201ENST00000559866 C19orf81C9J6K1 198 aa19.23■□□□□ 0.67
AC243562.3-201ENST00000559866 ZYXQ15942 572 aaKnown RBP19.23■□□□□ 0.67
AC243562.3-201ENST00000559866 NPLOC4Q8TAT6 608 aa19.23■□□□□ 0.67
AC243562.3-201ENST00000559866 CDX2Q99626 313 aaPredicted RBP19.23■□□□□ 0.67
AC243562.3-201ENST00000559866 SAP30BPQ9UHR5 308 aaKnown RBP19.23■□□□□ 0.67
AC243562.3-201ENST00000559866 RTP1P59025 263 aa19.22■□□□□ 0.67
AC243562.3-201ENST00000559866 MTX1Q13505 466 aa19.22■□□□□ 0.67
AC243562.3-201ENST00000559866 SHHQ15465 462 aa19.22■□□□□ 0.67
AC243562.3-201ENST00000559866 ZNF697Q5TEC3 545 aa19.22■□□□□ 0.67
AC243562.3-201ENST00000559866 DHX36Q9H2U1 1008 aaKnown RBP19.22■□□□□ 0.67
AC243562.3-201ENST00000559866 LRP2BPQ9P2M1 347 aa19.22■□□□□ 0.67
AC243562.3-201ENST00000559866 DDX20Q9UHI6 824 aaKnown RBP19.22■□□□□ 0.67
AC243562.3-201ENST00000559866 CRACR2BQ8N4Y2 399 aaPredicted RBP19.21■□□□□ 0.67
AC243562.3-201ENST00000559866 EDC3Q96F86 508 aaKnown RBP19.21■□□□□ 0.67
AC243562.3-201ENST00000559866 LBHD1Q9BQE6 289 aaPredicted RBP19.21■□□□□ 0.67
AC243562.3-201ENST00000559866 TTYH1Q9H313 450 aaPredicted RBP19.21■□□□□ 0.67
AC243562.3-201ENST00000559866 BTBD7Q9P203 1132 aa19.21■□□□□ 0.67
AC243562.3-201ENST00000559866 PARP14Q460N5 1801 aa19.21■□□□□ 0.67
AC243562.3-201ENST00000559866 NAV1Q8NEY1 1877 aa19.2■□□□□ 0.66
AC243562.3-201ENST00000559866 GH2P01242 217 aa19.2■□□□□ 0.66
AC243562.3-201ENST00000559866 IGHA2P01877 340 aa19.2■□□□□ 0.66
AC243562.3-201ENST00000559866 CYP2C19P33261 490 aa19.2■□□□□ 0.66
AC243562.3-201ENST00000559866 DYNLL1P63167 89 aaKnown RBP19.2■□□□□ 0.66
AC243562.3-201ENST00000559866 NAA16Q6N069 864 aaPredicted RBP19.2■□□□□ 0.66
AC243562.3-201ENST00000559866 CCAR1Q8IX12 1150 aaKnown RBP19.2■□□□□ 0.66
AC243562.3-201ENST00000559866 MYLIPQ8WY64 445 aa19.2■□□□□ 0.66
AC243562.3-201ENST00000559866 TNNQ9UQP3 1299 aa19.2■□□□□ 0.66
AC243562.3-201ENST00000559866 MUC3AQ02505 3323 aa19.2■□□□□ 0.66
AC243562.3-201ENST00000559866 PNMA6EA0A0J9YXQ4 647 aa19.19■□□□□ 0.66
AC243562.3-201ENST00000559866 PTPREP23469 700 aa19.19■□□□□ 0.66
AC243562.3-201ENST00000559866 CNGA1P29973 690 aa19.19■□□□□ 0.66
AC243562.3-201ENST00000559866 PPP4CP60510 307 aa19.19■□□□□ 0.66
AC243562.3-201ENST00000559866 GJC2Q5T442 439 aaPredicted RBP19.19■□□□□ 0.66
AC243562.3-201ENST00000559866 GORABQ5T7V8 394 aa19.19■□□□□ 0.66
AC243562.3-201ENST00000559866 USP17L2Q6R6M4 530 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms