RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 ANGEL1Q9UNK9 670 aaKnown RBP10.28□□□□□ -0.76
LRRC28-215ENST00000559774 TLL2Q9Y6L7 1015 aa10.28□□□□□ -0.76
LRRC28-215ENST00000559774 PLIN4Q96Q06 1357 aa10.27□□□□□ -0.76
LRRC28-215ENST00000559774 PAPPA2Q9BXP8 1791 aa10.27□□□□□ -0.77
LRRC28-215ENST00000559774 E7EWF7 191 aa10.27□□□□□ -0.77
LRRC28-215ENST00000559774 HAND2P61296 217 aa10.27□□□□□ -0.77
LRRC28-215ENST00000559774 CTDSPL2Q05D32 466 aa10.27□□□□□ -0.77
LRRC28-215ENST00000559774 TTLL12Q14166 644 aaPredicted RBP10.27□□□□□ -0.77
LRRC28-215ENST00000559774 ABCB5Q2M3G0 1257 aa10.27□□□□□ -0.77
LRRC28-215ENST00000559774 DLK2Q6UY11 383 aa10.27□□□□□ -0.77
LRRC28-215ENST00000559774 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.27□□□□□ -0.77
LRRC28-215ENST00000559774 RALYLQ86SE5 291 aaKnown RBP10.27□□□□□ -0.77
LRRC28-215ENST00000559774 ERO1BQ86YB8 467 aa10.27□□□□□ -0.77
LRRC28-215ENST00000559774 TBC1D10CQ8IV04 446 aa10.27□□□□□ -0.77
LRRC28-215ENST00000559774 NEDD1Q8NHV4 660 aa10.27□□□□□ -0.77
LRRC28-215ENST00000559774 TTC14Q96N46 770 aa10.27□□□□□ -0.77
LRRC28-215ENST00000559774 TM6SF1Q9BZW5 370 aa10.27□□□□□ -0.77
LRRC28-215ENST00000559774 ZNF408Q9H9D4 720 aa10.27□□□□□ -0.77
LRRC28-215ENST00000559774 KANSL2Q9H9L4 492 aa10.27□□□□□ -0.77
LRRC28-215ENST00000559774 PICK1Q9NRD5 415 aa10.27□□□□□ -0.77
LRRC28-215ENST00000559774 NAV1Q8NEY1 1877 aa10.27□□□□□ -0.77
LRRC28-215ENST00000559774 CDK5RAP2Q96SN8 1893 aa10.27□□□□□ -0.77
LRRC28-215ENST00000559774 WDR19Q8NEZ3 1342 aa10.27□□□□□ -0.77
LRRC28-215ENST00000559774 TSPY2A6NKD2 308 aa10.26□□□□□ -0.77
LRRC28-215ENST00000559774 USP17L5A8MUK1 530 aa10.26□□□□□ -0.77
LRRC28-215ENST00000559774 SEC24BO95487 1268 aa10.26□□□□□ -0.77
LRRC28-215ENST00000559774 TSPY3P0CV98 308 aa10.26□□□□□ -0.77
LRRC28-215ENST00000559774 TSPY8P0CW00 308 aa10.26□□□□□ -0.77
LRRC28-215ENST00000559774 NOVP48745 357 aa10.26□□□□□ -0.77
LRRC28-215ENST00000559774 RBM25P49756 843 aaKnown RBP10.26□□□□□ -0.77
LRRC28-215ENST00000559774 PPATQ06203 517 aa10.26□□□□□ -0.77
LRRC28-215ENST00000559774 SLC4A8Q2Y0W8 1093 aa10.26□□□□□ -0.77
LRRC28-215ENST00000559774 IQCA1Q86XH1 822 aa10.26□□□□□ -0.77
LRRC28-215ENST00000559774 SLC10A4Q96EP9 437 aa10.26□□□□□ -0.77
LRRC28-215ENST00000559774 NEK1Q96PY6 1258 aa10.26□□□□□ -0.77
LRRC28-215ENST00000559774 WDR18Q9BV38 432 aa10.26□□□□□ -0.77
LRRC28-215ENST00000559774 AS3MTQ9HBK9 375 aa10.26□□□□□ -0.77
LRRC28-215ENST00000559774 ZBTB21Q9ULJ3 1066 aa10.26□□□□□ -0.77
LRRC28-215ENST00000559774 MYH1P12882 1939 aa10.25□□□□□ -0.77
LRRC28-215ENST00000559774 IGKV6D-41A0A0C4DH26 115 aa10.25□□□□□ -0.77
LRRC28-215ENST00000559774 SPDYE5A6NIY4 337 aa10.25□□□□□ -0.77
LRRC28-215ENST00000559774 RASSF10A6NK89 507 aa10.25□□□□□ -0.77
LRRC28-215ENST00000559774 RANBP6O60518 1105 aaKnown RBP10.25□□□□□ -0.77
LRRC28-215ENST00000559774 ZBTB48P10074 688 aaPredicted RBP10.25□□□□□ -0.77
LRRC28-215ENST00000559774 PTPRAP18433 802 aa10.25□□□□□ -0.77
LRRC28-215ENST00000559774 INPP5BP32019 993 aa10.25□□□□□ -0.77
LRRC28-215ENST00000559774 HUNKP57058 714 aa10.25□□□□□ -0.77
LRRC28-215ENST00000559774 TFAP4Q01664 338 aa10.25□□□□□ -0.77
LRRC28-215ENST00000559774 EVX2Q03828 476 aa10.25□□□□□ -0.77
LRRC28-215ENST00000559774 FMR1Q06787 632 aaKnown RBP eCLIP10.25□□□□□ -0.77
LRRC28-215ENST00000559774 VGLL4Q14135 290 aa10.25□□□□□ -0.77
LRRC28-215ENST00000559774 SART3Q15020 963 aaKnown RBP10.25□□□□□ -0.77
LRRC28-215ENST00000559774 DGKHQ86XP1 1220 aa10.25□□□□□ -0.77
LRRC28-215ENST00000559774 TMTC2Q8N394 836 aa10.25□□□□□ -0.77
LRRC28-215ENST00000559774 FBXL16Q8N461 479 aa10.25□□□□□ -0.77
LRRC28-215ENST00000559774 SLC44A5Q8NCS7 719 aa10.25□□□□□ -0.77
LRRC28-215ENST00000559774 ZKSCAN4Q969J2 545 aaPredicted RBP10.25□□□□□ -0.77
LRRC28-215ENST00000559774 MKL1Q969V6 931 aa10.25□□□□□ -0.77
LRRC28-215ENST00000559774 CCDC102AQ96A19 550 aa10.25□□□□□ -0.77
LRRC28-215ENST00000559774 C22orf23Q9BZE7 217 aa10.25□□□□□ -0.77
LRRC28-215ENST00000559774 SH2D4AQ9H788 454 aa10.25□□□□□ -0.77
LRRC28-215ENST00000559774 NYAP2Q9P242 653 aa10.25□□□□□ -0.77
LRRC28-215ENST00000559774 SNX14Q9Y5W7 946 aa10.25□□□□□ -0.77
LRRC28-215ENST00000559774 SNCAIPQ9Y6H5 919 aa10.25□□□□□ -0.77
LRRC28-215ENST00000559774 FAM196BA6NMK8 535 aa10.24□□□□□ -0.77
LRRC28-215ENST00000559774 C19orf81C9J6K1 198 aa10.24□□□□□ -0.77
LRRC28-215ENST00000559774 UBE2Q2LH0YL09 131 aa10.24□□□□□ -0.77
LRRC28-215ENST00000559774 SMIM22K7EJ46 135 aa10.24□□□□□ -0.77
LRRC28-215ENST00000559774 MPHOSPH10O00566 681 aaKnown RBP10.24□□□□□ -0.77
LRRC28-215ENST00000559774 CXCL11O14625 94 aa10.24□□□□□ -0.77
LRRC28-215ENST00000559774 KDM4AO75164 1064 aa10.24□□□□□ -0.77
LRRC28-215ENST00000559774 PRDM1O75626 825 aa10.24□□□□□ -0.77
LRRC28-215ENST00000559774 GH2P01242 217 aa10.24□□□□□ -0.77
LRRC28-215ENST00000559774 AKR1B1P15121 316 aa10.24□□□□□ -0.77
LRRC28-215ENST00000559774 MCM5P33992 734 aa10.24□□□□□ -0.77
LRRC28-215ENST00000559774 C1QTNF8P60827 252 aa10.24□□□□□ -0.77
LRRC28-215ENST00000559774 PPIL2Q13356 520 aa10.24□□□□□ -0.77
LRRC28-215ENST00000559774 PRKG1Q13976 671 aa10.24□□□□□ -0.77
LRRC28-215ENST00000559774 RRP1BQ14684 758 aaKnown RBP10.24□□□□□ -0.77
LRRC28-215ENST00000559774 RGMBQ6NW40 437 aa10.24□□□□□ -0.77
LRRC28-215ENST00000559774 DHX32Q7L7V1 743 aaKnown RBP10.24□□□□□ -0.77
LRRC28-215ENST00000559774 MB21D2Q8IYB1 491 aaPredicted RBP10.24□□□□□ -0.77
LRRC28-215ENST00000559774 REM2Q8IYK8 340 aaPredicted RBP10.24□□□□□ -0.77
LRRC28-215ENST00000559774 RASEFQ8IZ41 740 aa10.24□□□□□ -0.77
LRRC28-215ENST00000559774 ANKS1AQ92625 1134 aa10.24□□□□□ -0.77
LRRC28-215ENST00000559774 TMEM87BQ96K49 555 aa10.24□□□□□ -0.77
LRRC28-215ENST00000559774 TOMM22Q9NS69 142 aa10.24□□□□□ -0.77
LRRC28-215ENST00000559774 RNF216Q9NWF9 866 aaPredicted RBP10.24□□□□□ -0.77
LRRC28-215ENST00000559774 MTMR4Q9NYA4 1195 aa10.24□□□□□ -0.77
LRRC28-215ENST00000559774 ZSWIM5Q9P217 1185 aa10.24□□□□□ -0.77
LRRC28-215ENST00000559774 TACC3Q9Y6A5 838 aa10.24□□□□□ -0.77
LRRC28-215ENST00000559774 POLR2AP24928 1970 aaKnown RBP10.24□□□□□ -0.77
LRRC28-215ENST00000559774 NEDD4P46934 1319 aa10.24□□□□□ -0.77
LRRC28-215ENST00000559774 ERICH2A1L162 156 aa10.23□□□□□ -0.77
LRRC28-215ENST00000559774 B4E1Z4 1266 aa10.23□□□□□ -0.77
LRRC28-215ENST00000559774 GDF11O95390 407 aa10.23□□□□□ -0.77
LRRC28-215ENST00000559774 TTLL1O95922 423 aa10.23□□□□□ -0.77
LRRC28-215ENST00000559774 GUCY1A2P33402 732 aa10.23□□□□□ -0.77
LRRC28-215ENST00000559774 ECE1P42892 770 aa10.23□□□□□ -0.77
LRRC28-215ENST00000559774 USP14P54578 494 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms