RNA–Protein interactions for RNA: ENST00000559718.1

USP3-214, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-214ENST00000559718 ADCY3O60266 1144 aa14.24□□□□□ -0.13
USP3-214ENST00000559718 PLCG2P16885 1265 aa14.24□□□□□ -0.13
USP3-214ENST00000559718 DIEXFQ68CQ4 756 aaKnown RBP14.24□□□□□ -0.13
USP3-214ENST00000559718 PROCA1Q8NCQ7 364 aaPredicted RBP14.24□□□□□ -0.13
USP3-214ENST00000559718 SLAIN1Q8ND83 568 aa14.24□□□□□ -0.13
USP3-214ENST00000559718 UNC93B1Q9H1C4 597 aa14.24□□□□□ -0.13
USP3-214ENST00000559718 SAP30BPQ9UHR5 308 aaKnown RBP14.24□□□□□ -0.13
USP3-214ENST00000559718 EXOC6BQ9Y2D4 811 aa14.24□□□□□ -0.13
USP3-214ENST00000559718 LOC285556D6RIA3 1793 aa14.24□□□□□ -0.13
USP3-214ENST00000559718 H0YGN5 161 aa14.23□□□□□ -0.13
USP3-214ENST00000559718 GJB1P08034 283 aa14.23□□□□□ -0.13
USP3-214ENST00000559718 CYP7A1P22680 504 aa14.23□□□□□ -0.13
USP3-214ENST00000559718 GJA8P48165 433 aa14.23□□□□□ -0.13
USP3-214ENST00000559718 UBXN2AP68543 259 aa14.23□□□□□ -0.13
USP3-214ENST00000559718 MTMR2Q13614 643 aa14.23□□□□□ -0.13
USP3-214ENST00000559718 ASCC2Q9H1I8 757 aaPredicted RBP14.23□□□□□ -0.13
USP3-214ENST00000559718 DHX36Q9H2U1 1008 aaKnown RBP14.23□□□□□ -0.13
USP3-214ENST00000559718 ANTXR1Q9H6X2 564 aa14.23□□□□□ -0.13
USP3-214ENST00000559718 PNMA3Q9UL41 463 aa14.23□□□□□ -0.13
USP3-214ENST00000559718 PEX10O60683 326 aa14.22□□□□□ -0.13
USP3-214ENST00000559718 IDH1O75874 414 aaKnown RBP14.22□□□□□ -0.13
USP3-214ENST00000559718 GDF11O95390 407 aa14.22□□□□□ -0.13
USP3-214ENST00000559718 INHAP05111 366 aa14.22□□□□□ -0.13
USP3-214ENST00000559718 FAM110CQ1W6H9 321 aa14.22□□□□□ -0.13
USP3-214ENST00000559718 SH3D19Q5HYK7 790 aa14.22□□□□□ -0.13
USP3-214ENST00000559718 UBE2Q1Q7Z7E8 422 aa14.22□□□□□ -0.13
USP3-214ENST00000559718 METTL16Q86W50 562 aaKnown RBP14.22□□□□□ -0.13
USP3-214ENST00000559718 MIGA1Q8NAN2 632 aa14.22□□□□□ -0.13
USP3-214ENST00000559718 TBC1D2Q9BYX2 928 aa14.22□□□□□ -0.13
USP3-214ENST00000559718 TAOK2Q9UL54 1235 aa14.22□□□□□ -0.13
USP3-214ENST00000559718 COLQQ9Y215 455 aaPredicted RBP14.22□□□□□ -0.13
USP3-214ENST00000559718 FOCADQ5VW36 1801 aa14.22□□□□□ -0.13
USP3-214ENST00000559718 ZBED9Q6R2W3 1325 aa14.21□□□□□ -0.13
USP3-214ENST00000559718 IRF5Q13568 498 aa14.21□□□□□ -0.13
USP3-214ENST00000559718 AACSQ86V21 672 aa14.21□□□□□ -0.13
USP3-214ENST00000559718 FOXP4Q8IVH2 680 aaPredicted RBP14.21□□□□□ -0.13
USP3-214ENST00000559718 CRACR2BQ8N4Y2 399 aaPredicted RBP14.21□□□□□ -0.13
USP3-214ENST00000559718 MAGEB6Q8N7X4 407 aa14.21□□□□□ -0.13
USP3-214ENST00000559718 NKX2-3Q8TAU0 364 aa14.21□□□□□ -0.13
USP3-214ENST00000559718 PXYLP1Q8TE99 480 aa14.21□□□□□ -0.13
USP3-214ENST00000559718 U2AF1L4Q8WU68 220 aaKnown RBP14.21□□□□□ -0.13
USP3-214ENST00000559718 COA7Q96BR5 231 aa14.21□□□□□ -0.13
USP3-214ENST00000559718 WDR18Q9BV38 432 aa14.21□□□□□ -0.13
USP3-214ENST00000559718 AS3MTQ9HBK9 375 aa14.21□□□□□ -0.13
USP3-214ENST00000559718 PCDH10Q9P2E7 1040 aa14.21□□□□□ -0.13
USP3-214ENST00000559718 ASNSP08243 561 aa14.2□□□□□ -0.14
USP3-214ENST00000559718 GCLCP48506 637 aaPredicted RBP14.2□□□□□ -0.14
USP3-214ENST00000559718 BACE1P56817 501 aa14.2□□□□□ -0.14
USP3-214ENST00000559718 DPF3Q92784 378 aa14.2□□□□□ -0.14
USP3-214ENST00000559718 TRIM34Q9BYJ4 488 aa14.2□□□□□ -0.14
USP3-214ENST00000559718 IL1RAPL2Q9NP60 686 aa14.2□□□□□ -0.14
USP3-214ENST00000559718 CEP290O15078 2479 aa14.19□□□□□ -0.14
USP3-214ENST00000559718 SGPL1O95470 568 aa14.19□□□□□ -0.14
USP3-214ENST00000559718 HLA-DOAP06340 250 aa14.19□□□□□ -0.14
USP3-214ENST00000559718 PABPC4Q13310 644 aaKnown RBP eCLIP14.19□□□□□ -0.14
USP3-214ENST00000559718 P2RX7Q99572 595 aaKnown RBP14.19□□□□□ -0.14
USP3-214ENST00000559718 ZBTB21Q9ULJ3 1066 aa14.19□□□□□ -0.14
USP3-214ENST00000559718 USP17L10C9JJH3 530 aa14.18□□□□□ -0.14
USP3-214ENST00000559718 APBB1O00213 710 aa14.18□□□□□ -0.14
USP3-214ENST00000559718 IGSF3O75054 1194 aa14.18□□□□□ -0.14
USP3-214ENST00000559718 FARP2O94887 1054 aaPredicted RBP14.18□□□□□ -0.14
USP3-214ENST00000559718 USP5P45974 858 aa14.18□□□□□ -0.14
USP3-214ENST00000559718 FXR1P51114 621 aaKnown RBP eCLIP14.18□□□□□ -0.14
USP3-214ENST00000559718 IRX3P78415 501 aaPredicted RBP14.18□□□□□ -0.14
USP3-214ENST00000559718 ERC1Q8IUD2 1116 aa14.18□□□□□ -0.14
USP3-214ENST00000559718 RHPN1Q8TCX5 695 aa14.18□□□□□ -0.14
USP3-214ENST00000559718 DEFB118Q96PH6 123 aa14.18□□□□□ -0.14
USP3-214ENST00000559718 TXNRD2Q9NNW7 524 aa14.18□□□□□ -0.14
USP3-214ENST00000559718 TMOD4Q9NZQ9 345 aa14.18□□□□□ -0.14
USP3-214ENST00000559718 GJD2Q9UKL4 321 aa14.18□□□□□ -0.14
USP3-214ENST00000559718 MYH1P12882 1939 aa14.17□□□□□ -0.14
USP3-214ENST00000559718 C19orf81C9J6K1 198 aa14.17□□□□□ -0.14
USP3-214ENST00000559718 GH2P01242 217 aa14.17□□□□□ -0.14
USP3-214ENST00000559718 HOXA7P31268 230 aaPredicted RBP14.17□□□□□ -0.14
USP3-214ENST00000559718 MAP3K12Q12852 859 aa14.17□□□□□ -0.14
USP3-214ENST00000559718 TRIM32Q13049 653 aa14.17□□□□□ -0.14
USP3-214ENST00000559718 POTEEQ6S8J3 1075 aa14.17□□□□□ -0.14
USP3-214ENST00000559718 BCL11AQ9H165 835 aa14.17□□□□□ -0.14
USP3-214ENST00000559718 PAK6Q9NQU5 681 aaPredicted RBP14.17□□□□□ -0.14
USP3-214ENST00000559718 EMILIN3Q9NT22 766 aa14.17□□□□□ -0.14
USP3-214ENST00000559718 MORF4L1Q9UBU8 362 aa14.17□□□□□ -0.14
USP3-214ENST00000559718 TFRCP02786 760 aaKnown RBP14.16□□□□□ -0.14
USP3-214ENST00000559718 HERVK_113P62684 666 aa14.16□□□□□ -0.14
USP3-214ENST00000559718 SIRT2Q8IXJ6 389 aa14.16□□□□□ -0.14
USP3-214ENST00000559718 MS4A3Q96HJ5 214 aa14.16□□□□□ -0.14
USP3-214ENST00000559718 GINM1Q9NU53 330 aa14.16□□□□□ -0.14
USP3-214ENST00000559718 COG6Q9Y2V7 657 aa14.16□□□□□ -0.14
USP3-214ENST00000559718 PLXNB2O15031 1838 aa14.15□□□□□ -0.14
USP3-214ENST00000559718 TRIOBPQ9H2D6 2365 aa14.15□□□□□ -0.14
USP3-214ENST00000559718 PLCD1P51178 756 aa14.15□□□□□ -0.14
USP3-214ENST00000559718 ZYXQ15942 572 aaKnown RBP14.15□□□□□ -0.14
USP3-214ENST00000559718 Q3C1V9 767 aa14.15□□□□□ -0.14
USP3-214ENST00000559718 TATDN1Q6P1N9 297 aa14.15□□□□□ -0.14
USP3-214ENST00000559718 RIOK1Q9BRS2 568 aaKnown RBP14.15□□□□□ -0.14
USP3-214ENST00000559718 HTATIP2Q9BUP3 242 aa14.15□□□□□ -0.14
USP3-214ENST00000559718 CRISPLD2Q9H0B8 497 aa14.15□□□□□ -0.14
USP3-214ENST00000559718 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.15□□□□□ -0.14
USP3-214ENST00000559718 RBPJLQ9UBG7 517 aa14.15□□□□□ -0.14
USP3-214ENST00000559718 SERPINB13Q9UIV8 391 aa14.15□□□□□ -0.14
USP3-214ENST00000559718 HMGCRP04035 888 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms