RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 RHPN1Q8TCX5 695 aa18.18■□□□□ 0.5
LRRC28-213ENST00000559399 DDX19BQ9UMR2 479 aa18.18■□□□□ 0.5
LRRC28-213ENST00000559399 TTF1Q15361 905 aaPredicted RBP18.17■□□□□ 0.5
LRRC28-213ENST00000559399 SHROOM1Q2M3G4 852 aaPredicted RBP18.17■□□□□ 0.5
LRRC28-213ENST00000559399 RPAP2Q8IXW5 612 aaPredicted RBP18.17■□□□□ 0.5
LRRC28-213ENST00000559399 CLASRPQ8N2M8 674 aaKnown RBP18.17■□□□□ 0.5
LRRC28-213ENST00000559399 U2AF1L4Q8WU68 220 aaKnown RBP18.17■□□□□ 0.5
LRRC28-213ENST00000559399 KIF1BPQ96EK5 621 aa18.17■□□□□ 0.5
LRRC28-213ENST00000559399 UNC93B1Q9H1C4 597 aa18.17■□□□□ 0.5
LRRC28-213ENST00000559399 TAOK2Q9UL54 1235 aa18.17■□□□□ 0.5
LRRC28-213ENST00000559399 KIAA0100Q14667 2235 aaKnown RBP18.17■□□□□ 0.5
LRRC28-213ENST00000559399 C19orf81C9J6K1 198 aa18.16■□□□□ 0.5
LRRC28-213ENST00000559399 USP17L10C9JJH3 530 aa18.16■□□□□ 0.5
LRRC28-213ENST00000559399 HOXA7P31268 230 aaPredicted RBP18.16■□□□□ 0.5
LRRC28-213ENST00000559399 EHD4Q9H223 541 aa18.16■□□□□ 0.5
LRRC28-213ENST00000559399 ZBTB40Q9NUA8 1239 aa18.16■□□□□ 0.5
LRRC28-213ENST00000559399 SERPINB13Q9UIV8 391 aa18.16■□□□□ 0.5
LRRC28-213ENST00000559399 COG6Q9Y2V7 657 aa18.16■□□□□ 0.5
LRRC28-213ENST00000559399 PHIPQ8WWQ0 1821 aa18.15■□□□□ 0.5
LRRC28-213ENST00000559399 APBB1O00213 710 aa18.15■□□□□ 0.5
LRRC28-213ENST00000559399 HABP4Q5JVS0 413 aaKnown RBP18.15■□□□□ 0.5
LRRC28-213ENST00000559399 TTC6Q86TZ1 520 aa18.15■□□□□ 0.5
LRRC28-213ENST00000559399 CHMP4BQ9H444 224 aaKnown RBP18.15■□□□□ 0.5
LRRC28-213ENST00000559399 MORF4L1Q9UBU8 362 aa18.15■□□□□ 0.5
LRRC28-213ENST00000559399 GH2P01242 217 aa18.14■□□□□ 0.49
LRRC28-213ENST00000559399 IFIT2P09913 472 aaKnown RBP18.14■□□□□ 0.49
LRRC28-213ENST00000559399 TATDN1Q6P1N9 297 aa18.14■□□□□ 0.49
LRRC28-213ENST00000559399 UBE2Q1Q7Z7E8 422 aa18.14■□□□□ 0.49
LRRC28-213ENST00000559399 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.14■□□□□ 0.49
LRRC28-213ENST00000559399 RIOK1Q9BRS2 568 aaKnown RBP18.14■□□□□ 0.49
LRRC28-213ENST00000559399 LOC285556D6RIA3 1793 aa18.14■□□□□ 0.49
LRRC28-213ENST00000559399 MAGEB6P1A0A0J9YX57 407 aa18.13■□□□□ 0.49
LRRC28-213ENST00000559399 H0YGN5 161 aa18.13■□□□□ 0.49
LRRC28-213ENST00000559399 RAB11FIP3O75154 756 aa18.13■□□□□ 0.49
LRRC28-213ENST00000559399 FARP2O94887 1054 aaPredicted RBP18.13■□□□□ 0.49
LRRC28-213ENST00000559399 SGPL1O95470 568 aa18.13■□□□□ 0.49
LRRC28-213ENST00000559399 PDE6AP16499 860 aa18.13■□□□□ 0.49
LRRC28-213ENST00000559399 HERVK_113P62684 666 aa18.13■□□□□ 0.49
LRRC28-213ENST00000559399 SLC9C2Q5TAH2 1124 aa18.13■□□□□ 0.49
LRRC28-213ENST00000559399 USP17L2Q6R6M4 530 aa18.13■□□□□ 0.49
LRRC28-213ENST00000559399 SIRT2Q8IXJ6 389 aa18.13■□□□□ 0.49
LRRC28-213ENST00000559399 DNAJC2Q99543 621 aaKnown RBP18.13■□□□□ 0.49
LRRC28-213ENST00000559399 P2RX7Q99572 595 aaKnown RBP18.13■□□□□ 0.49
LRRC28-213ENST00000559399 HTATIP2Q9BUP3 242 aa18.13■□□□□ 0.49
LRRC28-213ENST00000559399 PCDH10Q9P2E7 1040 aa18.13■□□□□ 0.49
LRRC28-213ENST00000559399 RCAN3Q9UKA8 241 aa18.13■□□□□ 0.49
LRRC28-213ENST00000559399 GOLIM4O00461 696 aa18.12■□□□□ 0.49
LRRC28-213ENST00000559399 CAPN2P17655 700 aa18.12■□□□□ 0.49
LRRC28-213ENST00000559399 GPRC5AQ8NFJ5 357 aa18.12■□□□□ 0.49
LRRC28-213ENST00000559399 GTF3C2Q8WUA4 911 aaPredicted RBP18.12■□□□□ 0.49
LRRC28-213ENST00000559399 DPF3Q92784 378 aa18.12■□□□□ 0.49
LRRC28-213ENST00000559399 DEFB118Q96PH6 123 aa18.12■□□□□ 0.49
LRRC28-213ENST00000559399 FEZ1Q99689 392 aa18.12■□□□□ 0.49
LRRC28-213ENST00000559399 PAK6Q9NQU5 681 aaPredicted RBP18.12■□□□□ 0.49
LRRC28-213ENST00000559399 SIPA1L1O43166 1804 aa18.12■□□□□ 0.49
LRRC28-213ENST00000559399 PTPRFP10586 1907 aa18.11■□□□□ 0.49
LRRC28-213ENST00000559399 HMGCRP04035 888 aa18.11■□□□□ 0.49
LRRC28-213ENST00000559399 CERKLQ49MI3 558 aaPredicted RBP18.11■□□□□ 0.49
LRRC28-213ENST00000559399 CRNKL1Q9BZJ0 848 aaKnown RBP18.11■□□□□ 0.49
LRRC28-213ENST00000559399 BCL11AQ9H165 835 aa18.11■□□□□ 0.49
LRRC28-213ENST00000559399 TXNRD2Q9NNW7 524 aa18.11■□□□□ 0.49
LRRC28-213ENST00000559399 EMILIN3Q9NT22 766 aa18.11■□□□□ 0.49
LRRC28-213ENST00000559399 GJD2Q9UKL4 321 aa18.11■□□□□ 0.49
LRRC28-213ENST00000559399 ZNF532Q9HCE3 1301 aa18.1■□□□□ 0.49
LRRC28-213ENST00000559399 POLR3DP05423 398 aaPredicted RBP18.1■□□□□ 0.49
LRRC28-213ENST00000559399 PLCD1P51178 756 aa18.1■□□□□ 0.49
LRRC28-213ENST00000559399 RAB3GAP1Q15042 981 aa18.1■□□□□ 0.49
LRRC28-213ENST00000559399 ABCB5Q2M3G0 1257 aa18.1■□□□□ 0.49
LRRC28-213ENST00000559399 SOCS4Q8WXH5 440 aa18.1■□□□□ 0.49
LRRC28-213ENST00000559399 C12orf42Q96LP6 360 aa18.1■□□□□ 0.49
LRRC28-213ENST00000559399 COLQQ9Y215 455 aaPredicted RBP18.1■□□□□ 0.49
LRRC28-213ENST00000559399 TFRCP02786 760 aaKnown RBP18.09■□□□□ 0.49
LRRC28-213ENST00000559399 SHMT1P34896 483 aa18.09■□□□□ 0.49
LRRC28-213ENST00000559399 USP14P54578 494 aa18.09■□□□□ 0.49
LRRC28-213ENST00000559399 ZYXQ15942 572 aaKnown RBP18.09■□□□□ 0.49
LRRC28-213ENST00000559399 KIAA1683Q9H0B3 1180 aa18.09■□□□□ 0.49
LRRC28-213ENST00000559399 CRISPLD2Q9H0B8 497 aa18.09■□□□□ 0.49
LRRC28-213ENST00000559399 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.09■□□□□ 0.49
LRRC28-213ENST00000559399 CABP5Q9NP86 173 aa18.09■□□□□ 0.49
LRRC28-213ENST00000559399 RBPJLQ9UBG7 517 aa18.09■□□□□ 0.49
LRRC28-213ENST00000559399 TCRBV5S4A2TA0A5A2 114 aa18.08■□□□□ 0.48
LRRC28-213ENST00000559399 PEX10O60683 326 aa18.08■□□□□ 0.48
LRRC28-213ENST00000559399 MAPK4P31152 587 aa18.08■□□□□ 0.48
LRRC28-213ENST00000559399 ERVK-9P63128 1117 aa18.08■□□□□ 0.48
LRRC28-213ENST00000559399 ERVK-24P63145 666 aa18.08■□□□□ 0.48
LRRC28-213ENST00000559399 PDE3AQ14432 1141 aa18.08■□□□□ 0.48
LRRC28-213ENST00000559399 CCAR1Q8IX12 1150 aaKnown RBP18.08■□□□□ 0.48
LRRC28-213ENST00000559399 NUDT12Q9BQG2 462 aa18.08■□□□□ 0.48
LRRC28-213ENST00000559399 PAGR1Q9BTK6 254 aa18.08■□□□□ 0.48
LRRC28-213ENST00000559399 PAG1Q9NWQ8 432 aa18.08■□□□□ 0.48
LRRC28-213ENST00000559399 MCM9Q9NXL9 1143 aa18.08■□□□□ 0.48
LRRC28-213ENST00000559399 USP17L15C9J2P7 530 aa18.07■□□□□ 0.48
LRRC28-213ENST00000559399 USP17L13C9JLJ4 530 aa18.07■□□□□ 0.48
LRRC28-213ENST00000559399 USP17L11C9JVI0 530 aa18.07■□□□□ 0.48
LRRC28-213ENST00000559399 USP17L18D6R9N7 530 aa18.07■□□□□ 0.48
LRRC28-213ENST00000559399 USP17L22D6RA61 530 aa18.07■□□□□ 0.48
LRRC28-213ENST00000559399 USP17L17D6RBQ6 530 aa18.07■□□□□ 0.48
LRRC28-213ENST00000559399 USP17L19D6RCP7 530 aa18.07■□□□□ 0.48
LRRC28-213ENST00000559399 USP17L20D6RJB6 530 aa18.07■□□□□ 0.48
LRRC28-213ENST00000559399 VCAM1P19320 739 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms