RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 PHKA1P46020 1223 aa20.35■□□□□ 0.85
PSEN1-224ENST00000559361 GJD2Q9UKL4 321 aa20.35■□□□□ 0.85
PSEN1-224ENST00000559361 TRIM75PA6NK02 468 aa20.34■□□□□ 0.85
PSEN1-224ENST00000559361 TBC1D12O60347 775 aa20.34■□□□□ 0.85
PSEN1-224ENST00000559361 IGSF3O75054 1194 aa20.34■□□□□ 0.85
PSEN1-224ENST00000559361 ATP5JP18859 108 aa20.34■□□□□ 0.85
PSEN1-224ENST00000559361 LRIT3Q3SXY7 679 aa20.34■□□□□ 0.85
PSEN1-224ENST00000559361 TREML2Q5T2D2 321 aa20.34■□□□□ 0.85
PSEN1-224ENST00000559361 PROCA1Q8NCQ7 364 aaPredicted RBP20.34■□□□□ 0.85
PSEN1-224ENST00000559361 OSBPL3Q9H4L5 887 aa20.34■□□□□ 0.85
PSEN1-224ENST00000559361 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.34■□□□□ 0.85
PSEN1-224ENST00000559361 GLRX3O76003 335 aaKnown RBP20.33■□□□□ 0.85
PSEN1-224ENST00000559361 CCDC84Q86UT8 332 aaPredicted RBP20.33■□□□□ 0.85
PSEN1-224ENST00000559361 ZSCAN29Q8IWY8 852 aaPredicted RBP20.33■□□□□ 0.85
PSEN1-224ENST00000559361 ZGPATQ8N5A5 531 aaKnown RBP20.33■□□□□ 0.85
PSEN1-224ENST00000559361 PNMA3Q9UL41 463 aa20.33■□□□□ 0.85
PSEN1-224ENST00000559361 LOC285556D6RIA3 1793 aa20.33■□□□□ 0.84
PSEN1-224ENST00000559361 PLXNB2O15031 1838 aa20.32■□□□□ 0.84
PSEN1-224ENST00000559361 RPTORQ8N122 1335 aa20.32■□□□□ 0.84
PSEN1-224ENST00000559361 UNC80Q8N2C7 3258 aa20.32■□□□□ 0.84
PSEN1-224ENST00000559361 NPM3O75607 178 aaKnown RBP20.32■□□□□ 0.84
PSEN1-224ENST00000559361 HMGCRP04035 888 aa20.32■□□□□ 0.84
PSEN1-224ENST00000559361 PDE1AP54750 535 aa20.32■□□□□ 0.84
PSEN1-224ENST00000559361 TAOK2Q9UL54 1235 aa20.32■□□□□ 0.84
PSEN1-224ENST00000559361 GCLCP48506 637 aaPredicted RBP20.31■□□□□ 0.84
PSEN1-224ENST00000559361 RASGRF1Q13972 1273 aa20.31■□□□□ 0.84
PSEN1-224ENST00000559361 NBPF3Q9H094 633 aa20.31■□□□□ 0.84
PSEN1-224ENST00000559361 BCL11AQ9H165 835 aa20.31■□□□□ 0.84
PSEN1-224ENST00000559361 RHBDL3P58872 404 aa20.3■□□□□ 0.84
PSEN1-224ENST00000559361 PLEKHM2Q8IWE5 1019 aa20.3■□□□□ 0.84
PSEN1-224ENST00000559361 SLF2Q8IX21 1173 aa20.3■□□□□ 0.84
PSEN1-224ENST00000559361 C7orf61Q8IZ16 206 aa20.3■□□□□ 0.84
PSEN1-224ENST00000559361 DEFB123Q8N688 67 aa20.3■□□□□ 0.84
PSEN1-224ENST00000559361 SPATA5Q8NB90 893 aa20.3■□□□□ 0.84
PSEN1-224ENST00000559361 OSBPL5Q9H0X9 879 aaPredicted RBP20.3■□□□□ 0.84
PSEN1-224ENST00000559361 HMX1Q9NP08 348 aaPredicted RBP20.3■□□□□ 0.84
PSEN1-224ENST00000559361 OGDHLQ9ULD0 1010 aa20.3■□□□□ 0.84
PSEN1-224ENST00000559361 ZMYND8Q9ULU4 1186 aaPredicted RBP20.3■□□□□ 0.84
PSEN1-224ENST00000559361 DDX60LQ5H9U9 1706 aaKnown RBP20.3■□□□□ 0.84
PSEN1-224ENST00000559361 GPR75-ASB3A0A0A6YYF3 556 aa20.29■□□□□ 0.84
PSEN1-224ENST00000559361 BTDP43251 543 aa20.29■□□□□ 0.84
PSEN1-224ENST00000559361 TRIM32Q13049 653 aa20.29■□□□□ 0.84
PSEN1-224ENST00000559361 PICALMQ13492 652 aa20.29■□□□□ 0.84
PSEN1-224ENST00000559361 TTF1Q15361 905 aaPredicted RBP20.29■□□□□ 0.84
PSEN1-224ENST00000559361 ZNF280CQ8ND82 737 aa20.29■□□□□ 0.84
PSEN1-224ENST00000559361 ZNF384Q8TF68 577 aa20.29■□□□□ 0.84
PSEN1-224ENST00000559361 TBC1D2Q9BYX2 928 aa20.29■□□□□ 0.84
PSEN1-224ENST00000559361 STXBP5LQ9Y2K9 1186 aa20.29■□□□□ 0.84
PSEN1-224ENST00000559361 MROH7-TTC4A0A0A0MT08 1334 aa20.28■□□□□ 0.84
PSEN1-224ENST00000559361 ATAD5Q96QE3 1844 aa20.28■□□□□ 0.84
PSEN1-224ENST00000559361 PDE4AP27815 886 aa20.28■□□□□ 0.84
PSEN1-224ENST00000559361 MCAMP43121 646 aa20.28■□□□□ 0.84
PSEN1-224ENST00000559361 SPP2Q13103 211 aa20.28■□□□□ 0.84
PSEN1-224ENST00000559361 SH3D19Q5HYK7 790 aa20.28■□□□□ 0.84
PSEN1-224ENST00000559361 MAP3K21Q5TCX8 1036 aa20.28■□□□□ 0.84
PSEN1-224ENST00000559361 TMED8Q6PL24 325 aaPredicted RBP20.28■□□□□ 0.84
PSEN1-224ENST00000559361 DZIP1Q86YF9 867 aaKnown RBP20.28■□□□□ 0.84
PSEN1-224ENST00000559361 PI4K2BQ8TCG2 481 aa20.28■□□□□ 0.84
PSEN1-224ENST00000559361 OTUD7AQ8TE49 926 aaPredicted RBP20.28■□□□□ 0.84
PSEN1-224ENST00000559361 HAUS7Q99871 368 aa20.28■□□□□ 0.84
PSEN1-224ENST00000559361 MTMR10Q9NXD2 777 aa20.28■□□□□ 0.84
PSEN1-224ENST00000559361 HMG20BQ9P0W2 317 aa20.28■□□□□ 0.84
PSEN1-224ENST00000559361 MAGEA10P43363 369 aaPredicted RBP20.27■□□□□ 0.84
PSEN1-224ENST00000559361 PABPC4Q13310 644 aaKnown RBP eCLIP20.27■□□□□ 0.84
PSEN1-224ENST00000559361 SPTY2D1Q68D10 685 aaPredicted RBP20.27■□□□□ 0.84
PSEN1-224ENST00000559361 Q7L0L9 218 aa20.27■□□□□ 0.84
PSEN1-224ENST00000559361 TICAM2Q86XR7 235 aa20.27■□□□□ 0.84
PSEN1-224ENST00000559361 TDHQ8IZJ6 230 aa20.27■□□□□ 0.84
PSEN1-224ENST00000559361 ASCC2Q9H1I8 757 aaPredicted RBP20.27■□□□□ 0.84
PSEN1-224ENST00000559361 C11orf49Q9H6J7 331 aa20.27■□□□□ 0.84
PSEN1-224ENST00000559361 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.27■□□□□ 0.84
PSEN1-224ENST00000559361 MORF4L1Q9UBU8 362 aa20.27■□□□□ 0.84
PSEN1-224ENST00000559361 ABCF2Q9UG63 623 aa20.27■□□□□ 0.84
PSEN1-224ENST00000559361 COL2A1P02458 1487 aaPredicted RBP20.26■□□□□ 0.83
PSEN1-224ENST00000559361 HMGCS2P54868 508 aa20.26■□□□□ 0.83
PSEN1-224ENST00000559361 RRP1BQ14684 758 aaKnown RBP20.26■□□□□ 0.83
PSEN1-224ENST00000559361 TRIB2Q92519 343 aa20.26■□□□□ 0.83
PSEN1-224ENST00000559361 LAMA2P24043 3122 aaKnown RBP20.26■□□□□ 0.83
PSEN1-224ENST00000559361 FAM196BA6NMK8 535 aa20.25■□□□□ 0.83
PSEN1-224ENST00000559361 MAP4K4O95819 1239 aaPredicted RBP20.25■□□□□ 0.83
PSEN1-224ENST00000559361 SYN1P17600 705 aa20.25■□□□□ 0.83
PSEN1-224ENST00000559361 CAP2P40123 477 aa20.25■□□□□ 0.83
PSEN1-224ENST00000559361 MECOMQ03112 1051 aa20.25■□□□□ 0.83
PSEN1-224ENST00000559361 BOLA2Q9H3K6 86 aa20.25■□□□□ 0.83
PSEN1-224ENST00000559361 PFASO15067 1338 aa20.25■□□□□ 0.83
PSEN1-224ENST00000559361 XRCC5P13010 732 aaKnown RBP20.24■□□□□ 0.83
PSEN1-224ENST00000559361 LRRFIP1Q32MZ4 808 aaKnown RBP20.24■□□□□ 0.83
PSEN1-224ENST00000559361 PAG1Q9NWQ8 432 aa20.24■□□□□ 0.83
PSEN1-224ENST00000559361 USP17L5A8MUK1 530 aa20.23■□□□□ 0.83
PSEN1-224ENST00000559361 COL6A1P12109 1028 aa20.23■□□□□ 0.83
PSEN1-224ENST00000559361 ZAP70P43403 619 aa20.23■□□□□ 0.83
PSEN1-224ENST00000559361 DNAH12Q6ZR08 3092 aa20.23■□□□□ 0.83
PSEN1-224ENST00000559361 ERICH6Q7L0X2 663 aa20.23■□□□□ 0.83
PSEN1-224ENST00000559361 DNAJC2Q99543 621 aaKnown RBP20.23■□□□□ 0.83
PSEN1-224ENST00000559361 CYP2E1P05181 493 aaPredicted RBP20.22■□□□□ 0.83
PSEN1-224ENST00000559361 HOXA7P31268 230 aaPredicted RBP20.22■□□□□ 0.83
PSEN1-224ENST00000559361 TTC22Q5TAA0 569 aa20.22■□□□□ 0.83
PSEN1-224ENST00000559361 TSHZ3Q63HK5 1081 aa20.22■□□□□ 0.83
PSEN1-224ENST00000559361 WDR18Q9BV38 432 aa20.22■□□□□ 0.83
PSEN1-224ENST00000559361 MAP3K12Q12852 859 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms