RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 ERO1BQ86YB8 467 aa13.7□□□□□ -0.22
SNX1-204ENST00000559061 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.7□□□□□ -0.22
SNX1-204ENST00000559061 DIAPH3Q9NSV4 1193 aa13.7□□□□□ -0.22
SNX1-204ENST00000559061 WBP1LQ9NX94 342 aa13.7□□□□□ -0.22
SNX1-204ENST00000559061 ARPP21Q9UBL0 812 aaPredicted RBP13.7□□□□□ -0.22
SNX1-204ENST00000559061 KCNH4Q9UQ05 1017 aa13.7□□□□□ -0.22
SNX1-204ENST00000559061 CSADQ9Y600 493 aa13.7□□□□□ -0.22
SNX1-204ENST00000559061 ZMYM6O95789 1325 aa13.69□□□□□ -0.22
SNX1-204ENST00000559061 TESPA1A2RU30 521 aaPredicted RBP13.69□□□□□ -0.22
SNX1-204ENST00000559061 IGF2BP3O00425 579 aaKnown RBP eCLIP13.69□□□□□ -0.22
SNX1-204ENST00000559061 SGSM2O43147 1006 aa13.69□□□□□ -0.22
SNX1-204ENST00000559061 AKR1B1P15121 316 aa13.69□□□□□ -0.22
SNX1-204ENST00000559061 CDK8P49336 464 aa13.69□□□□□ -0.22
SNX1-204ENST00000559061 PPIL2Q13356 520 aa13.69□□□□□ -0.22
SNX1-204ENST00000559061 DGKZQ13574 1117 aa13.69□□□□□ -0.22
SNX1-204ENST00000559061 CLEC10AQ8IUN9 316 aa13.69□□□□□ -0.22
SNX1-204ENST00000559061 CRACR2BQ8N4Y2 399 aaPredicted RBP13.69□□□□□ -0.22
SNX1-204ENST00000559061 BRI3BPQ8WY22 251 aa13.69□□□□□ -0.22
SNX1-204ENST00000559061 INCENPQ9NQS7 918 aa13.69□□□□□ -0.22
SNX1-204ENST00000559061 ZBTB21Q9ULJ3 1066 aa13.69□□□□□ -0.22
SNX1-204ENST00000559061 AFG3L2Q9Y4W6 797 aa13.69□□□□□ -0.22
SNX1-204ENST00000559061 RAD50Q92878 1312 aa13.68□□□□□ -0.22
SNX1-204ENST00000559061 GH2P01242 217 aa13.68□□□□□ -0.22
SNX1-204ENST00000559061 FGAP02671 866 aa13.68□□□□□ -0.22
SNX1-204ENST00000559061 RASA1P20936 1047 aa13.68□□□□□ -0.22
SNX1-204ENST00000559061 TM4SF4P48230 202 aa13.68□□□□□ -0.22
SNX1-204ENST00000559061 TDO2P48775 406 aa13.68□□□□□ -0.22
SNX1-204ENST00000559061 PTH1RQ03431 593 aa13.68□□□□□ -0.22
SNX1-204ENST00000559061 PPATQ06203 517 aa13.68□□□□□ -0.22
SNX1-204ENST00000559061 SIAH1Q8IUQ4 282 aa13.68□□□□□ -0.22
SNX1-204ENST00000559061 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.68□□□□□ -0.22
SNX1-204ENST00000559061 MINDY4BA8MYZ0 360 aa13.67□□□□□ -0.22
SNX1-204ENST00000559061 HIP1O00291 1037 aa13.67□□□□□ -0.22
SNX1-204ENST00000559061 APPP05067 770 aa13.67□□□□□ -0.22
SNX1-204ENST00000559061 CTDSPL2Q05D32 466 aa13.67□□□□□ -0.22
SNX1-204ENST00000559061 PPARAQ07869 468 aa13.67□□□□□ -0.22
SNX1-204ENST00000559061 TBC1D10CQ8IV04 446 aa13.67□□□□□ -0.22
SNX1-204ENST00000559061 STK11IPQ8N1F8 1099 aa13.67□□□□□ -0.22
SNX1-204ENST00000559061 NAPBQ9H115 298 aa13.67□□□□□ -0.22
SNX1-204ENST00000559061 R3HDMLQ9H3Y0 253 aa13.67□□□□□ -0.22
SNX1-204ENST00000559061 ANAPC4Q9UJX5 808 aa13.67□□□□□ -0.22
SNX1-204ENST00000559061 TAF6LQ9Y6J9 622 aa13.67□□□□□ -0.22
SNX1-204ENST00000559061 ZHX2Q9Y6X8 837 aa13.67□□□□□ -0.22
SNX1-204ENST00000559061 PARP14Q460N5 1801 aa13.67□□□□□ -0.22
SNX1-204ENST00000559061 A0A0G2JLL6 359 aaPredicted RBP13.66□□□□□ -0.22
SNX1-204ENST00000559061 PRDM1O75626 825 aa13.66□□□□□ -0.22
SNX1-204ENST00000559061 FGRP09769 529 aa13.66□□□□□ -0.22
SNX1-204ENST00000559061 HSPA1AP0DMV8 641 aaKnown RBP13.66□□□□□ -0.22
SNX1-204ENST00000559061 HSPA1BP0DMV9 641 aaKnown RBP13.66□□□□□ -0.22
SNX1-204ENST00000559061 SEPT2Q15019 361 aa13.66□□□□□ -0.22
SNX1-204ENST00000559061 CERKLQ49MI3 558 aaPredicted RBP13.66□□□□□ -0.22
SNX1-204ENST00000559061 GPAT2Q6NUI2 795 aa13.66□□□□□ -0.22
SNX1-204ENST00000559061 PRRT2Q7Z6L0 340 aaPredicted RBP13.66□□□□□ -0.22
SNX1-204ENST00000559061 FAM43AQ8N2R8 423 aa13.66□□□□□ -0.22
SNX1-204ENST00000559061 ESYT1Q9BSJ8 1104 aa13.66□□□□□ -0.22
SNX1-204ENST00000559061 SWAP70Q9UH65 585 aa13.66□□□□□ -0.22
SNX1-204ENST00000559061 ZSWIM8A7E2V4 1837 aa13.66□□□□□ -0.22
SNX1-204ENST00000559061 RLFQ13129 1914 aa13.66□□□□□ -0.22
SNX1-204ENST00000559061 MYH4Q9Y623 1939 aa13.65□□□□□ -0.22
SNX1-204ENST00000559061 IGKV6D-41A0A0C4DH26 115 aa13.65□□□□□ -0.22
SNX1-204ENST00000559061 A0A1W2PRG0 241 aa13.65□□□□□ -0.22
SNX1-204ENST00000559061 FOXN1O15353 648 aa13.65□□□□□ -0.22
SNX1-204ENST00000559061 HAND2P61296 217 aa13.65□□□□□ -0.22
SNX1-204ENST00000559061 IFNL1Q8IU54 200 aa13.65□□□□□ -0.22
SNX1-204ENST00000559061 ACER1Q8TDN7 264 aa13.65□□□□□ -0.22
SNX1-204ENST00000559061 WDR18Q9BV38 432 aa13.65□□□□□ -0.22
SNX1-204ENST00000559061 DSCC1Q9BVC3 393 aa13.65□□□□□ -0.22
SNX1-204ENST00000559061 LSG1Q9H089 658 aaKnown RBP13.65□□□□□ -0.22
SNX1-204ENST00000559061 PICK1Q9NRD5 415 aa13.65□□□□□ -0.22
SNX1-204ENST00000559061 RNF186Q9NXI6 227 aa13.65□□□□□ -0.22
SNX1-204ENST00000559061 TAOK2Q9UL54 1235 aa13.65□□□□□ -0.22
SNX1-204ENST00000559061 PLIN4Q96Q06 1357 aa13.65□□□□□ -0.22
SNX1-204ENST00000559061 CCL15-CCL14A0A0B4J2E2 113 aa13.64□□□□□ -0.23
SNX1-204ENST00000559061 MANSC4A6NHS7 340 aaPredicted RBP13.64□□□□□ -0.23
SNX1-204ENST00000559061 TRIM75PA6NK02 468 aa13.64□□□□□ -0.23
SNX1-204ENST00000559061 USP17L5A8MUK1 530 aa13.64□□□□□ -0.23
SNX1-204ENST00000559061 BTBD19C9JJ37 291 aa13.64□□□□□ -0.23
SNX1-204ENST00000559061 ASNSP08243 561 aa13.64□□□□□ -0.23
SNX1-204ENST00000559061 SPP2Q13103 211 aa13.64□□□□□ -0.23
SNX1-204ENST00000559061 COL9A3Q14050 684 aaPredicted RBP13.64□□□□□ -0.23
SNX1-204ENST00000559061 CCL15Q16663 113 aa13.64□□□□□ -0.23
SNX1-204ENST00000559061 ABCB5Q2M3G0 1257 aa13.64□□□□□ -0.23
SNX1-204ENST00000559061 KIAA1755Q5JYT7 1200 aa13.64□□□□□ -0.23
SNX1-204ENST00000559061 NACAP1Q9BZK3 213 aa13.64□□□□□ -0.23
SNX1-204ENST00000559061 TSKSQ9UJT2 592 aa13.64□□□□□ -0.23
SNX1-204ENST00000559061 NEDD4P46934 1319 aa13.64□□□□□ -0.23
SNX1-204ENST00000559061 ADGRA2Q96PE1 1338 aa13.64□□□□□ -0.23
SNX1-204ENST00000559061 CXCL11O14625 94 aa13.63□□□□□ -0.23
SNX1-204ENST00000559061 HSPA8P11142 646 aaKnown RBP13.63□□□□□ -0.23
SNX1-204ENST00000559061 GTF2A2P52657 109 aa13.63□□□□□ -0.23
SNX1-204ENST00000559061 CAP1Q01518 475 aa13.63□□□□□ -0.23
SNX1-204ENST00000559061 SNAPC2Q13487 334 aa13.63□□□□□ -0.23
SNX1-204ENST00000559061 TREML2Q5T2D2 321 aa13.63□□□□□ -0.23
SNX1-204ENST00000559061 ZNF280CQ8ND82 737 aa13.63□□□□□ -0.23
SNX1-204ENST00000559061 DDRGK1Q96HY6 314 aa13.63□□□□□ -0.23
SNX1-204ENST00000559061 TRIM34Q9BYJ4 488 aa13.63□□□□□ -0.23
SNX1-204ENST00000559061 GINM1Q9NU53 330 aa13.63□□□□□ -0.23
SNX1-204ENST00000559061 CDC45O75419 566 aa13.62□□□□□ -0.23
SNX1-204ENST00000559061 MAP2K1Q02750 393 aaPredicted RBP13.62□□□□□ -0.23
SNX1-204ENST00000559061 MTMR2Q13614 643 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms