RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 PRDM1O75626 825 aa18.64■□□□□ 0.57
CDC42BPB-204ENST00000559043 FGRP09769 529 aa18.64■□□□□ 0.57
CDC42BPB-204ENST00000559043 ZKSCAN1P17029 563 aaPredicted RBP18.64■□□□□ 0.57
CDC42BPB-204ENST00000559043 MAP3K10Q02779 954 aa18.64■□□□□ 0.57
CDC42BPB-204ENST00000559043 JAKMIP1Q96N16 626 aaKnown RBP18.64■□□□□ 0.57
CDC42BPB-204ENST00000559043 SERPINB13Q9UIV8 391 aa18.64■□□□□ 0.57
CDC42BPB-204ENST00000559043 SSC5DA1L4H1 1573 aa18.64■□□□□ 0.57
CDC42BPB-204ENST00000559043 LAMA4Q16363 1823 aa18.63■□□□□ 0.57
CDC42BPB-204ENST00000559043 PRPF40AO75400 957 aaKnown RBP18.63■□□□□ 0.57
CDC42BPB-204ENST00000559043 CDK8P49336 464 aa18.63■□□□□ 0.57
CDC42BPB-204ENST00000559043 AKNAD1Q5T1N1 836 aa18.63■□□□□ 0.57
CDC42BPB-204ENST00000559043 C16orf86Q6ZW13 317 aa18.63■□□□□ 0.57
CDC42BPB-204ENST00000559043 FOXP4Q8IVH2 680 aaPredicted RBP18.63■□□□□ 0.57
CDC42BPB-204ENST00000559043 PANK2Q9BZ23 570 aa18.63■□□□□ 0.57
CDC42BPB-204ENST00000559043 EHD4Q9H223 541 aa18.63■□□□□ 0.57
CDC42BPB-204ENST00000559043 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.63■□□□□ 0.57
CDC42BPB-204ENST00000559043 CYP46A1Q9Y6A2 500 aa18.63■□□□□ 0.57
CDC42BPB-204ENST00000559043 ROBO3Q96MS0 1386 aa18.63■□□□□ 0.57
CDC42BPB-204ENST00000559043 LAMB1P07942 1786 aa18.63■□□□□ 0.57
CDC42BPB-204ENST00000559043 ITGBL1O95965 494 aaPredicted RBP18.62■□□□□ 0.57
CDC42BPB-204ENST00000559043 SHMT1P34896 483 aa18.62■□□□□ 0.57
CDC42BPB-204ENST00000559043 ZNF445P59923 1031 aa18.62■□□□□ 0.57
CDC42BPB-204ENST00000559043 SHROOM1Q2M3G4 852 aaPredicted RBP18.62■□□□□ 0.57
CDC42BPB-204ENST00000559043 STAG1Q8WVM7 1258 aa18.62■□□□□ 0.57
CDC42BPB-204ENST00000559043 PDRG1Q9NUG6 133 aa18.62■□□□□ 0.57
CDC42BPB-204ENST00000559043 PPP2R3BQ9Y5P8 575 aa18.62■□□□□ 0.57
CDC42BPB-204ENST00000559043 NEDD4P46934 1319 aa18.62■□□□□ 0.57
CDC42BPB-204ENST00000559043 WDR33Q9C0J8 1336 aaKnown RBP18.62■□□□□ 0.57
CDC42BPB-204ENST00000559043 HLA-DOAP06340 250 aa18.62■□□□□ 0.57
CDC42BPB-204ENST00000559043 JAG1P78504 1218 aa18.62■□□□□ 0.57
CDC42BPB-204ENST00000559043 CDCA5Q96FF9 252 aa18.62■□□□□ 0.57
CDC42BPB-204ENST00000559043 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.62■□□□□ 0.57
CDC42BPB-204ENST00000559043 CPA1P15085 419 aa18.61■□□□□ 0.57
CDC42BPB-204ENST00000559043 AMOTL1Q8IY63 956 aa18.61■□□□□ 0.57
CDC42BPB-204ENST00000559043 GPT2Q8TD30 523 aa18.61■□□□□ 0.57
CDC42BPB-204ENST00000559043 ZSCAN31Q96LW9 406 aaPredicted RBP18.61■□□□□ 0.57
CDC42BPB-204ENST00000559043 RNF20Q5VTR2 975 aa18.61■□□□□ 0.57
CDC42BPB-204ENST00000559043 CHADLQ6NUI6 762 aa18.61■□□□□ 0.57
CDC42BPB-204ENST00000559043 PHF20L1A8MW92 1017 aa18.6■□□□□ 0.57
CDC42BPB-204ENST00000559043 TBC1D12O60347 775 aa18.6■□□□□ 0.57
CDC42BPB-204ENST00000559043 RASA1P20936 1047 aa18.6■□□□□ 0.57
CDC42BPB-204ENST00000559043 PSMA5P28066 241 aa18.6■□□□□ 0.57
CDC42BPB-204ENST00000559043 TATDN1Q6P1N9 297 aa18.6■□□□□ 0.57
CDC42BPB-204ENST00000559043 MFSD6Q6ZSS7 791 aa18.6■□□□□ 0.57
CDC42BPB-204ENST00000559043 CRACR2BQ8N4Y2 399 aaPredicted RBP18.6■□□□□ 0.57
CDC42BPB-204ENST00000559043 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.6■□□□□ 0.57
CDC42BPB-204ENST00000559043 SH2B1Q9NRF2 756 aaPredicted RBP18.6■□□□□ 0.57
CDC42BPB-204ENST00000559043 B4E1Z4 1266 aa18.59■□□□□ 0.57
CDC42BPB-204ENST00000559043 PRKG1Q13976 671 aa18.59■□□□□ 0.57
CDC42BPB-204ENST00000559043 FOXD4L5Q5VV16 416 aaPredicted RBP18.59■□□□□ 0.57
CDC42BPB-204ENST00000559043 FOXD4L4Q8WXT5 416 aaPredicted RBP18.59■□□□□ 0.57
CDC42BPB-204ENST00000559043 CHAMP1Q96JM3 812 aa18.59■□□□□ 0.57
CDC42BPB-204ENST00000559043 ALDH8A1Q9H2A2 487 aaPredicted RBP18.59■□□□□ 0.57
CDC42BPB-204ENST00000559043 ORC4O43929 436 aa18.59■□□□□ 0.57
CDC42BPB-204ENST00000559043 FAM47AQ5JRC9 791 aa18.59■□□□□ 0.57
CDC42BPB-204ENST00000559043 RRP12Q5JTH9 1297 aaKnown RBP18.59■□□□□ 0.57
CDC42BPB-204ENST00000559043 CAVIN1Q6NZI2 390 aaKnown RBP18.59■□□□□ 0.57
CDC42BPB-204ENST00000559043 MOB2Q70IA6 237 aa18.59■□□□□ 0.57
CDC42BPB-204ENST00000559043 ZSWIM5Q9P217 1185 aa18.59■□□□□ 0.57
CDC42BPB-204ENST00000559043 HERC5Q9UII4 1024 aaKnown RBP18.59■□□□□ 0.57
CDC42BPB-204ENST00000559043 USP2O75604 605 aaPredicted RBP18.58■□□□□ 0.56
CDC42BPB-204ENST00000559043 LARGE1O95461 756 aa18.58■□□□□ 0.56
CDC42BPB-204ENST00000559043 ZSCAN23Q3MJ62 389 aa18.58■□□□□ 0.56
CDC42BPB-204ENST00000559043 SUPT20HL1Q3ZLR7 823 aa18.58■□□□□ 0.56
CDC42BPB-204ENST00000559043 CYB5R4Q7L1T6 521 aa18.58■□□□□ 0.56
CDC42BPB-204ENST00000559043 CHST3Q7LGC8 479 aa18.58■□□□□ 0.56
CDC42BPB-204ENST00000559043 FAM43AQ8N2R8 423 aa18.58■□□□□ 0.56
CDC42BPB-204ENST00000559043 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.58■□□□□ 0.56
CDC42BPB-204ENST00000559043 MKNK2Q9HBH9 465 aa18.58■□□□□ 0.56
CDC42BPB-204ENST00000559043 MBD3O95983 291 aa18.57■□□□□ 0.56
CDC42BPB-204ENST00000559043 PDE4BQ07343 736 aa18.57■□□□□ 0.56
CDC42BPB-204ENST00000559043 MB21D2Q8IYB1 491 aaPredicted RBP18.57■□□□□ 0.56
CDC42BPB-204ENST00000559043 NEK1Q96PY6 1258 aa18.57■□□□□ 0.56
CDC42BPB-204ENST00000559043 LARP6Q9BRS8 491 aaKnown RBP18.57■□□□□ 0.56
CDC42BPB-204ENST00000559043 TOMM22Q9NS69 142 aa18.57■□□□□ 0.56
CDC42BPB-204ENST00000559043 KDM4AO75164 1064 aa18.57■□□□□ 0.56
CDC42BPB-204ENST00000559043 SLC3A2P08195 630 aaKnown RBP18.57■□□□□ 0.56
CDC42BPB-204ENST00000559043 AKR1B1P15121 316 aa18.57■□□□□ 0.56
CDC42BPB-204ENST00000559043 ANTXR2P58335 489 aa18.57■□□□□ 0.56
CDC42BPB-204ENST00000559043 TCEANC2Q96MN5 208 aa18.57■□□□□ 0.56
CDC42BPB-204ENST00000559043 SWAP70Q9UH65 585 aa18.57■□□□□ 0.56
CDC42BPB-204ENST00000559043 SMC3Q9UQE7 1217 aa18.57■□□□□ 0.56
CDC42BPB-204ENST00000559043 RANBP6O60518 1105 aaKnown RBP18.56■□□□□ 0.56
CDC42BPB-204ENST00000559043 NCLP19338 710 aaKnown RBP18.56■□□□□ 0.56
CDC42BPB-204ENST00000559043 INPP5BP32019 993 aa18.56■□□□□ 0.56
CDC42BPB-204ENST00000559043 CST9Q5W186 159 aa18.56■□□□□ 0.56
CDC42BPB-204ENST00000559043 RNF41Q9H4P4 317 aaPredicted RBP18.56■□□□□ 0.56
CDC42BPB-204ENST00000559043 RTN4Q9NQC3 1192 aaKnown RBP18.56■□□□□ 0.56
CDC42BPB-204ENST00000559043 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.56■□□□□ 0.56
CDC42BPB-204ENST00000559043 ZNF112Q9UJU3 913 aa18.56■□□□□ 0.56
CDC42BPB-204ENST00000559043 NMT2O60551 498 aa18.55■□□□□ 0.56
CDC42BPB-204ENST00000559043 GDF11O95390 407 aa18.55■□□□□ 0.56
CDC42BPB-204ENST00000559043 ZSCAN22P10073 491 aaPredicted RBP18.55■□□□□ 0.56
CDC42BPB-204ENST00000559043 TFAP4Q01664 338 aa18.55■□□□□ 0.56
CDC42BPB-204ENST00000559043 CERKLQ49MI3 558 aaPredicted RBP18.55■□□□□ 0.56
CDC42BPB-204ENST00000559043 NCOA7Q8NI08 942 aa18.55■□□□□ 0.56
CDC42BPB-204ENST00000559043 KLRG1Q96E93 195 aa18.55■□□□□ 0.56
CDC42BPB-204ENST00000559043 TCHHQ07283 1943 aa18.55■□□□□ 0.56
CDC42BPB-204ENST00000559043 STX6O43752 255 aa18.55■□□□□ 0.56
CDC42BPB-204ENST00000559043 PCP11498 1178 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms