RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 JAG1P78504 1218 aa14.75□□□□□ -0.05
GABPB1-208ENST00000558970 MAP3K9P80192 1104 aa14.75□□□□□ -0.05
GABPB1-208ENST00000558970 PDE4BQ07343 736 aa14.75□□□□□ -0.05
GABPB1-208ENST00000558970 CERKLQ49MI3 558 aaPredicted RBP14.75□□□□□ -0.05
GABPB1-208ENST00000558970 FAM47AQ5JRC9 791 aa14.75□□□□□ -0.05
GABPB1-208ENST00000558970 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.75□□□□□ -0.05
GABPB1-208ENST00000558970 CLEC10AQ8IUN9 316 aa14.75□□□□□ -0.05
GABPB1-208ENST00000558970 CNKSR2Q8WXI2 1034 aa14.75□□□□□ -0.05
GABPB1-208ENST00000558970 SWAP70Q9UH65 585 aa14.75□□□□□ -0.05
GABPB1-208ENST00000558970 SLC27A2O14975 620 aa14.74□□□□□ -0.05
GABPB1-208ENST00000558970 RANBP6O60518 1105 aaKnown RBP14.74□□□□□ -0.05
GABPB1-208ENST00000558970 GH2P01242 217 aa14.74□□□□□ -0.05
GABPB1-208ENST00000558970 AKR1B1P15121 316 aa14.74□□□□□ -0.05
GABPB1-208ENST00000558970 RAB3GAP1Q15042 981 aa14.74□□□□□ -0.05
GABPB1-208ENST00000558970 ABCB5Q2M3G0 1257 aa14.74□□□□□ -0.05
GABPB1-208ENST00000558970 AKNAD1Q5T1N1 836 aa14.74□□□□□ -0.05
GABPB1-208ENST00000558970 CREB3L3Q68CJ9 461 aa14.74□□□□□ -0.05
GABPB1-208ENST00000558970 MFSD6Q6ZSS7 791 aa14.74□□□□□ -0.05
GABPB1-208ENST00000558970 SAPCD2Q86UD0 394 aa14.74□□□□□ -0.05
GABPB1-208ENST00000558970 METTL16Q86W50 562 aaKnown RBP14.74□□□□□ -0.05
GABPB1-208ENST00000558970 ANKRD13AQ8IZ07 590 aa14.74□□□□□ -0.05
GABPB1-208ENST00000558970 SNCAIPQ9Y6H5 919 aa14.74□□□□□ -0.05
GABPB1-208ENST00000558970 TLL2Q9Y6L7 1015 aa14.74□□□□□ -0.05
GABPB1-208ENST00000558970 PTPRFP10586 1907 aa14.74□□□□□ -0.05
GABPB1-208ENST00000558970 B4E1Z4 1266 aa14.73□□□□□ -0.05
GABPB1-208ENST00000558970 RASA1P20936 1047 aa14.73□□□□□ -0.05
GABPB1-208ENST00000558970 CAP2P40123 477 aa14.73□□□□□ -0.05
GABPB1-208ENST00000558970 CTCFP49711 727 aaPredicted RBP14.73□□□□□ -0.05
GABPB1-208ENST00000558970 ZNF157P51786 506 aaPredicted RBP14.73□□□□□ -0.05
GABPB1-208ENST00000558970 FKBP1BP68106 108 aa14.73□□□□□ -0.05
GABPB1-208ENST00000558970 MAP3K10Q02779 954 aa14.73□□□□□ -0.05
GABPB1-208ENST00000558970 MAP3K11Q16584 847 aa14.73□□□□□ -0.05
GABPB1-208ENST00000558970 TATDN1Q6P1N9 297 aa14.73□□□□□ -0.05
GABPB1-208ENST00000558970 SCYL3Q8IZE3 742 aa14.73□□□□□ -0.05
GABPB1-208ENST00000558970 ZNF444Q8N0Y2 327 aaPredicted RBP14.73□□□□□ -0.05
GABPB1-208ENST00000558970 NKX2-3Q8TAU0 364 aa14.73□□□□□ -0.05
GABPB1-208ENST00000558970 SLC10A4Q96EP9 437 aa14.73□□□□□ -0.05
GABPB1-208ENST00000558970 OTUD5Q96G74 571 aa14.73□□□□□ -0.05
GABPB1-208ENST00000558970 PICK1Q9NRD5 415 aa14.73□□□□□ -0.05
GABPB1-208ENST00000558970 ZNF112Q9UJU3 913 aa14.73□□□□□ -0.05
GABPB1-208ENST00000558970 ANAPC4Q9UJX5 808 aa14.73□□□□□ -0.05
GABPB1-208ENST00000558970 TSPY2A6NKD2 308 aa14.72□□□□□ -0.05
GABPB1-208ENST00000558970 FOXN1O15353 648 aa14.72□□□□□ -0.05
GABPB1-208ENST00000558970 CTNND1O60716 968 aaKnown RBP14.72□□□□□ -0.05
GABPB1-208ENST00000558970 TSPY3P0CV98 308 aa14.72□□□□□ -0.05
GABPB1-208ENST00000558970 TSPY8P0CW00 308 aa14.72□□□□□ -0.05
GABPB1-208ENST00000558970 ATP2B2Q01814 1243 aa14.72□□□□□ -0.05
GABPB1-208ENST00000558970 NECTIN1Q15223 517 aa14.72□□□□□ -0.05
GABPB1-208ENST00000558970 LDLRAD1Q5T700 205 aa14.72□□□□□ -0.05
GABPB1-208ENST00000558970 CYP4F22Q6NT55 531 aa14.72□□□□□ -0.05
GABPB1-208ENST00000558970 STOX1Q6ZVD7 989 aa14.72□□□□□ -0.05
GABPB1-208ENST00000558970 STAG1Q8WVM7 1258 aa14.72□□□□□ -0.05
GABPB1-208ENST00000558970 OPTNQ96CV9 577 aa14.72□□□□□ -0.05
GABPB1-208ENST00000558970 ZKSCAN3Q9BRR0 538 aa14.72□□□□□ -0.05
GABPB1-208ENST00000558970 USP26Q9BXU7 913 aa14.72□□□□□ -0.05
GABPB1-208ENST00000558970 CABP5Q9NP86 173 aa14.72□□□□□ -0.05
GABPB1-208ENST00000558970 WBP1LQ9NX94 342 aa14.72□□□□□ -0.05
GABPB1-208ENST00000558970 ZBTB21Q9ULJ3 1066 aa14.72□□□□□ -0.05
GABPB1-208ENST00000558970 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.72□□□□□ -0.05
GABPB1-208ENST00000558970 E7EWF7 191 aa14.71□□□□□ -0.05
GABPB1-208ENST00000558970 NMT2O60551 498 aa14.71□□□□□ -0.05
GABPB1-208ENST00000558970 VEGFBP49765 207 aa14.71□□□□□ -0.05
GABPB1-208ENST00000558970 TFAP4Q01664 338 aa14.71□□□□□ -0.05
GABPB1-208ENST00000558970 SEPT2Q15019 361 aa14.71□□□□□ -0.05
GABPB1-208ENST00000558970 RNF20Q5VTR2 975 aa14.71□□□□□ -0.05
GABPB1-208ENST00000558970 RGMBQ6NW40 437 aa14.71□□□□□ -0.05
GABPB1-208ENST00000558970 RASEFQ8IZ41 740 aa14.71□□□□□ -0.05
GABPB1-208ENST00000558970 RNF41Q9H4P4 317 aaPredicted RBP14.71□□□□□ -0.05
GABPB1-208ENST00000558970 ZNF287Q9HBT7 754 aa14.71□□□□□ -0.05
GABPB1-208ENST00000558970 TRIM75PA6NK02 468 aa14.7□□□□□ -0.06
GABPB1-208ENST00000558970 RASSF10A6NK89 507 aa14.7□□□□□ -0.06
GABPB1-208ENST00000558970 KDM4AO75164 1064 aa14.7□□□□□ -0.06
GABPB1-208ENST00000558970 PTPRAP18433 802 aa14.7□□□□□ -0.06
GABPB1-208ENST00000558970 MCCP23508 829 aa14.7□□□□□ -0.06
GABPB1-208ENST00000558970 ZYXQ15942 572 aaKnown RBP14.7□□□□□ -0.06
GABPB1-208ENST00000558970 DEFB115Q30KQ5 88 aa14.7□□□□□ -0.06
GABPB1-208ENST00000558970 CHST3Q7LGC8 479 aa14.7□□□□□ -0.06
GABPB1-208ENST00000558970 RALYLQ86SE5 291 aaKnown RBP14.7□□□□□ -0.06
GABPB1-208ENST00000558970 RASAL3Q86YV0 1011 aa14.7□□□□□ -0.06
GABPB1-208ENST00000558970 CHMP4CQ96CF2 233 aa14.7□□□□□ -0.06
GABPB1-208ENST00000558970 ZHX2Q9Y6X8 837 aa14.7□□□□□ -0.06
GABPB1-208ENST00000558970 RAD21O60216 631 aa14.69□□□□□ -0.06
GABPB1-208ENST00000558970 ASNSP08243 561 aa14.69□□□□□ -0.06
GABPB1-208ENST00000558970 HSPA4P34932 840 aa14.69□□□□□ -0.06
GABPB1-208ENST00000558970 GJA5P36382 358 aa14.69□□□□□ -0.06
GABPB1-208ENST00000558970 TRDNQ13061 729 aa14.69□□□□□ -0.06
GABPB1-208ENST00000558970 DGKZQ13574 1117 aa14.69□□□□□ -0.06
GABPB1-208ENST00000558970 COL9A3Q14050 684 aaPredicted RBP14.69□□□□□ -0.06
GABPB1-208ENST00000558970 ADCK5Q3MIX3 580 aa14.69□□□□□ -0.06
GABPB1-208ENST00000558970 NOL9Q5SY16 702 aaKnown RBP14.69□□□□□ -0.06
GABPB1-208ENST00000558970 TMEM179Q6ZVK1 233 aa14.69□□□□□ -0.06
GABPB1-208ENST00000558970 WNK4Q96J92 1243 aa14.69□□□□□ -0.06
GABPB1-208ENST00000558970 SNX14Q9Y5W7 946 aa14.69□□□□□ -0.06
GABPB1-208ENST00000558970 ORC4O43929 436 aa14.68□□□□□ -0.06
GABPB1-208ENST00000558970 AOC2O75106 756 aa14.68□□□□□ -0.06
GABPB1-208ENST00000558970 CPA1P15085 419 aa14.68□□□□□ -0.06
GABPB1-208ENST00000558970 ZKSCAN1P17029 563 aaPredicted RBP14.68□□□□□ -0.06
GABPB1-208ENST00000558970 GUCY1A2P33402 732 aa14.68□□□□□ -0.06
GABPB1-208ENST00000558970 ICA1Q05084 483 aa14.68□□□□□ -0.06
GABPB1-208ENST00000558970 ERO1BQ86YB8 467 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms